Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008861 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 3.0e-85 318.5 168 100.0
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 2.4e-50 202.6 139 75.5
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 1.3e-48 196.8 136 72.8
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 1.7e-48 196.4 137 74.5
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 1.0e-45 187.2 161 65.8
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 1.5e-39 166.8 129 64.3
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 2.5e-39 166.0 127 63.8
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 5.5e-39 164.9 139 59.7
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 9.4e-39 164.1 133 60.9
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 3.6e-38 162.2 127 60.6
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 1.0e-37 160.6 127 62.2
MD10G1119100 Malus domestica HOM05D004110 ORTHO05D004810 1.0e-37 160.6 126 64.3
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 1.4e-37 160.2 133 60.9
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 2.3e-37 159.5 120 64.2
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 2.3e-37 159.5 134 59.7
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.3e-37 159.5 134 59.7
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 3.0e-37 159.1 140 58.6
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 5.2e-37 158.3 134 60.4
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 6.7e-37 157.9 126 61.9
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 1.5e-36 156.8 125 60.0
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.0e-36 156.4 129 62.0
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.0e-36 156.4 129 62.0
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.0e-36 156.4 134 60.4
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 2.6e-36 156.0 123 63.4
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 4.4e-36 155.2 126 60.3
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 4.4e-36 155.2 126 60.3
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 7.5e-36 154.5 126 57.1
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 9.7e-36 154.1 149 56.4
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 2.2e-35 152.9 123 63.4
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 2.8e-35 152.5 127 59.1
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 6.3e-35 151.4 136 56.6
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 8.2e-35 151.0 143 58.7
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 8.2e-35 151.0 126 60.3
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 1.1e-34 150.6 121 62.0
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 1.8e-34 149.8 140 56.4
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 1.8e-34 149.8 120 64.2
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 4.1e-34 148.7 127 56.7
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 7.0e-34 147.9 129 56.6
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 7.0e-34 147.9 136 53.7
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 7.0e-34 147.9 138 56.5
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 9.1e-34 147.5 124 58.1
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 9.1e-34 147.5 126 57.9
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 1.6e-33 146.7 142 52.1
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 2.0e-33 146.4 126 59.5
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 5.9e-33 144.8 129 61.2
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 1.7e-32 143.3 136 52.9
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 2.9e-32 142.5 125 60.0
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 2.9e-32 142.5 127 55.9
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 3.8e-32 142.1 126 53.2
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 1.5e-31 140.2 125 54.4
COL.COLO4_17260 Corchorus olitorius HOM05D004110 ORTHO05D004810 1.9e-31 139.8 124 54.0
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 2.5e-31 139.4 119 58.0
Solyc11g039890.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 2.5e-31 139.4 142 52.8
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 3.2e-31 139.0 142 56.3
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 7.2e-31 137.9 118 58.5
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 9.4e-31 137.5 128 57.0
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 9.4e-31 137.5 126 54.0
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 1.2e-30 137.1 119 56.3
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 3.6e-30 135.6 127 53.5
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 6.1e-30 134.8 128 57.0
Hma1.2p1_0032F.1_g019640 Hydrangea macrophylla HOM05D004110 ORTHO05D004810 8.0e-30 134.4 100 67.0
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 1.0e-29 134.0 120 57.5
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 1.8e-29 133.3 153 49.7
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 3.0e-29 132.5 137 50.4
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 6.8e-29 131.3 122 52.5
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 8.8e-29 131.0 127 52.0
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 1.5e-28 130.2 128 51.6
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 2.0e-28 129.8 122 53.3
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 4.4e-28 128.6 136 50.0
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 9.8e-28 127.5 137 49.6
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.3e-27 127.1 135 51.1
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 3.7e-27 125.6 153 48.4
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 2.4e-26 122.9 122 48.4
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 2.4e-26 122.9 122 48.4
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 7.0e-26 121.3 107 52.3
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 9.1e-26 120.9 122 49.2
arahy.Tifrunner.gnm1.ann1.G8A5JV Arachis hypogaea HOM05D004110 ORTHO05D004810 1.6e-25 120.2 90 58.9
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 4.5e-25 118.6 130 51.5
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 7.7e-25 117.9 122 47.5
ClCG02G011550 Citrullus lanatus HOM05D004110 ORTHO05D004810 1.3e-24 117.1 155 49.0
Gohir.A12G039250 Gossypium hirsutum HOM05D004110 ORTHO05D004810 5.0e-24 115.2 113 50.4
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 8.5e-24 114.4 94 58.5
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 1.1e-23 114.0 115 49.6
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 9.4e-23 110.9 173 38.7
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 2.7e-22 109.4 119 47.9
Zm00001eb026660 Zea mays HOM05D004110 ORTHO05D004810 3.0e-21 105.9 136 44.1
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 2.6e-20 102.8 120 40.0
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 2.8e-19 99.4 147 37.4
Os10g0154566 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 4.1e-18 95.5 121 43.0
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 2.0e-17 93.2 157 36.3
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 7.7e-17 91.3 89 53.9
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 1.0e-16 90.9 108 44.4
AagrBONN_evm.TU.Sc2ySwM_344.4149 Anthoceros agrestis HOM05D004110 ORTHO05D004810 3.8e-16 89.0 144 37.5
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.5e-15 87.0 163 35.6
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 6.8e-13 78.2 153 34.0
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 8.3e-11 71.2 158 33.5
arahy.Tifrunner.gnm1.ann1.9L03M9 Arachis hypogaea HOM05D004110 ORTHO05D004810 1.3e-08 63.9 43 58.1
Duzib248G0615 Durio zibethinus HOM05D004110 ORTHO05D004810 2.8e-06 56.2 96 37.5


User provided reference genes

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