Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008833 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D008082 5.1e-57 224.2 111 100.0
Rhsim10G0121300 Rhododendron simsii HOM05D002593 ORTHO05D008082 3.4e-21 105.1 63 77.8
Actinidia20961 Actinidia chinensis HOM05D002593 ORTHO05D008082 7.6e-21 104.0 68 75.0
vmacro05322 Vaccinium macrocarpon HOM05D002593 ORTHO05D008082 6.5e-20 100.9 63 73.0
TAR365G0686 Trochodendron aralioides HOM05D002593 ORTHO05D008082 3.9e-17 91.7 65 67.7
Manes.01G236200 Manihot esculenta HOM05D002593 ORTHO05D008082 6.7e-17 90.9 58 72.4
Oeu052791.1 Olea europaea HOM05D002593 ORTHO05D008082 5.7e-16 87.8 61 67.2
CiPaw.08G081500 Carya illinoinensis HOM05D002593 ORTHO05D008082 1.3e-15 86.7 64 65.6
Cfa004926 Carpinus fangiana HOM05D002593 ORTHO05D008082 1.6e-15 86.3 64 64.1
Nn1g08395 Nelumbo nucifera HOM05D002593 ORTHO05D008082 2.2e-15 85.9 65 66.2
QL09p037436 Quercus lobata HOM05D002593 ORTHO05D008082 1.1e-14 83.6 61 60.7
CAN.G179.25 Capsicum annuum HOM05D002593 ORTHO05D008082 1.8e-14 82.8 63 60.3
MBI18_g28920_MAGBIO Magnolia biondii HOM05D002593 ORTHO05D008082 2.4e-14 82.4 77 51.9
Sabra14G0081400 Salix brachista HOM05D002593 ORTHO05D008082 2.4e-14 82.4 55 65.5
Sopen01g030550 Solanum pennellii HOM05D002593 ORTHO05D008082 2.4e-14 82.4 63 60.3
Nitab4.5_0002103g0100 Nicotiana tabacum HOM05D002593 ORTHO05D008082 3.1e-14 82.0 63 58.7
Solyc01g068620.4 Solanum lycopersicum HOM05D002593 ORTHO05D008082 3.1e-14 82.0 63 60.3
Cc01_g21690 Coffea canephora HOM05D002593 ORTHO05D008082 4.1e-14 81.6 51 68.6
GSVIVG01028225001 Vitis vinifera HOM05D002593 ORTHO05D008082 4.1e-14 81.6 58 67.2
Ciclev10021459m.g Citrus clementina HOM05D002593 ORTHO05D008082 5.3e-14 81.3 53 69.8
Eucgr.K00552 Eucalyptus grandis HOM05D002593 ORTHO05D008082 6.9e-14 80.9 64 60.9
Prupe.3G000900 Prunus persica HOM05D002593 ORTHO05D008082 6.9e-14 80.9 54 68.5
Gohir.A08G122100 Gossypium hirsutum HOM05D002593 ORTHO05D008082 9.0e-14 80.5 55 65.5
Nitab4.5_0001628g0060 Nicotiana tabacum HOM05D003479 ORTHO05D004659 9.0e-14 80.5 60 56.7
Potri.014G110600 Populus trichocarpa HOM05D002593 ORTHO05D008082 9.0e-14 80.5 47 68.1
COL.COLO4_23100 Corchorus olitorius HOM05D002593 ORTHO05D008082 1.2e-13 80.1 61 59.0
Thecc.01G327600 Theobroma cacao HOM05D002593 ORTHO05D008082 1.2e-13 80.1 58 60.3
PGSC0003DMG400000842 Solanum tuberosum HOM05D002593 ORTHO05D008082 1.5e-13 79.7 63 58.7
Sc17g0000080 Simmondsia chinensis HOM05D002593 ORTHO05D008082 2.6e-13 79.0 60 61.7
Gohir.D08G143500 Gossypium hirsutum HOM05D002593 ORTHO05D008082 4.5e-13 78.2 55 65.5
Potri.002G185100 Populus trichocarpa HOM05D002593 ORTHO05D008082 4.5e-13 78.2 55 58.2
PGR142G0326 Punica granatum HOM05D002593 ORTHO05D008082 4.5e-13 78.2 54 68.5
Sabra02G0130800 Salix brachista HOM05D002593 ORTHO05D008082 5.9e-13 77.8 57 57.9
PSO210G3595 Papaver somniferum HOM05D002593 ORTHO05D008082 7.6e-13 77.4 60 65.0
Migut.K00221 Erythranthe guttata HOM05D002593 ORTHO05D008082 1.3e-12 76.6 46 73.9
Peaxi162Scf00309g00511 Petunia axillaris HOM05D002593 ORTHO05D008082 1.3e-12 76.6 63 55.6
SalBow1G1534 Salvia bowleyana HOM05D002593 ORTHO05D008082 1.3e-12 76.6 45 77.8
Gorai.004G147900 Gossypium raimondii HOM05D002593 ORTHO05D008082 2.2e-12 75.9 55 63.6
THA.LOC104815911 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 2.2e-12 75.9 71 50.7
Lalb_Chr02g0147271 Lupinus albus HOM05D002593 ORTHO05D008082 3.8e-12 75.1 58 60.3
Lsat_1_v5_gn_9_7181 Lactuca sativa HOM05D002593 ORTHO05D008082 6.5e-12 74.3 50 66.0
MSTRG.26210 Avicennia marina HOM05D002593 ORTHO05D008082 8.5e-12 73.9 48 66.7
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 8.5e-12 73.9 53 60.4
Cpa.g.sc57.47 Carica papaya HOM05D002593 ORTHO05D008082 1.1e-11 73.6 58 60.3
AL6G51700 Arabidopsis lyrata HOM05D002593 ORTHO05D008082 1.4e-11 73.2 53 58.5
BcaB01g02125 Brassica carinata HOM05D002593 ORTHO05D008082 1.4e-11 73.2 68 50.0
BcaB01g02375 Brassica carinata HOM05D002593 ORTHO05D008082 1.9e-11 72.8 53 60.4
Thhalv10028817m.g Eutrema salsugineum HOM05D002593 ORTHO05D008082 1.9e-11 72.8 53 60.4
AT4G01650 Arabidopsis thaliana HOM05D002593 ORTHO05D008082 2.5e-11 72.4 53 58.5
BcaC04g24081 Brassica carinata HOM05D002593 ORTHO05D008082 2.5e-11 72.4 68 50.0
C09p01260 Brassica napus HOM05D002593 ORTHO05D008082 2.5e-11 72.4 68 50.0
BolC9t53060H Brassica oleracea HOM05D002593 ORTHO05D008082 2.5e-11 72.4 68 50.0
BraA09t35788Z Brassica rapa HOM05D002593 ORTHO05D008082 2.5e-11 72.4 68 50.0
Ca_10229_v3 Cicer arietinum L. HOM05D002593 ORTHO05D008082 2.5e-11 72.4 45 71.1
MELO3C021224.2 Cucumis melo HOM05D002593 ORTHO05D008082 2.5e-11 72.4 53 64.2
Medtr1g085550 Medicago truncatula HOM05D002593 ORTHO05D008082 2.5e-11 72.4 55 60.0
Carub.0006s3556 Capsella rubella HOM05D002593 ORTHO05D008082 3.2e-11 72.0 53 58.5
CsaV3_6G000300 Cucumis sativus L. HOM05D002593 ORTHO05D008082 3.2e-11 72.0 53 64.2
HanXRQChr10g0286511 Helianthus annuus HOM05D002593 ORTHO05D008082 4.2e-11 71.6 58 56.9
Lj5g0028161 Lotus japonicus HOM05D002593 ORTHO05D008082 4.2e-11 71.6 59 57.6
MD09G1291800 Malus domestica HOM05D002593 ORTHO05D008082 4.2e-11 71.6 42 73.8
Sp6g01540 Schrenkiella parvula HOM05D002593 ORTHO05D008082 4.2e-11 71.6 53 58.5
BcaC01g06808 Brassica carinata HOM05D002593 ORTHO05D008082 5.5e-11 71.2 53 58.5
A03p31530 Brassica napus HOM05D002593 ORTHO05D008082 5.5e-11 71.2 53 58.5
C03p38510 Brassica napus HOM05D002593 ORTHO05D008082 5.5e-11 71.2 53 58.5
BolC3t16125H Brassica oleracea HOM05D002593 ORTHO05D008082 5.5e-11 71.2 53 58.5
BraA03t12332Z Brassica rapa HOM05D002593 ORTHO05D008082 5.5e-11 71.2 53 58.5
CARHR250020 Cardamine hirsuta HOM05D002593 ORTHO05D008082 5.5e-11 71.2 53 56.6
PSO761G0232 Papaver somniferum HOM05D002593 ORTHO05D008082 5.5e-11 71.2 60 61.7
Atru.chr5.835 Acer truncatum HOM05D002593 ORTHO05D008082 9.4e-11 70.5 53 60.4
Os01g0971700 Oryza sativa ssp. japonica HOM05D002593 ORTHO05D008082 9.4e-11 70.5 59 52.5
Phvul.007G207900 Phaseolus vulgaris HOM05D002593 ORTHO05D008082 9.4e-11 70.5 58 58.6
TWI14G0813 Tripterygium wilfordii HOM05D002593 ORTHO05D008082 9.4e-11 70.5 43 74.4
FAN19G0602 Fragaria x ananassa HOM05D002593 ORTHO05D008082 1.2e-10 70.1 70 55.7
unitig_0.g2672 Utricularia gibba HOM05D002593 ORTHO05D008082 1.2e-10 70.1 47 63.8
ClCG06G004130 Citrullus lanatus HOM05D002593 ORTHO05D008082 1.6e-10 69.7 58 55.2
Aqoxy2G02408 Aquilegia oxysepala HOM05D002593 ORTHO05D008082 2.1e-10 69.3 45 66.7
SGA_v2.0_scaffold12G06079 Striga asiatica HOM05D002593 ORTHO05D008082 2.1e-10 69.3 44 72.7
THA.LOC104801332 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 2.1e-10 69.3 49 65.3
TPR.G3014 Trifolium pratense HOM05D002593 ORTHO05D008082 2.7e-10 68.9 45 64.4
FvH4_1g26070 Fragaria vesca HOM05D002593 ORTHO05D008082 3.6e-10 68.6 56 62.5
FAN23G1996 Fragaria x ananassa HOM05D002593 ORTHO05D008082 3.6e-10 68.6 56 62.5
FAN23G3081 Fragaria x ananassa HOM05D002593 ORTHO05D008082 3.6e-10 68.6 56 62.5
VMungo0720G0036 Vigna mungo HOM05D002593 ORTHO05D008082 3.6e-10 68.6 60 55.0
arahy.Tifrunner.gnm1.ann1.BAG6CY Arachis hypogaea HOM05D002593 ORTHO05D008082 4.6e-10 68.2 55 58.2
arahy.Tifrunner.gnm1.ann1.EK7H7E Arachis hypogaea HOM05D002593 ORTHO05D008082 4.6e-10 68.2 55 58.2
CDE05G1031 Ceratophyllum demersum HOM05D002593 ORTHO05D008082 4.6e-10 68.2 55 61.8
CDE11G0220 Ceratophyllum demersum HOM05D002593 ORTHO05D008082 6.1e-10 67.8 61 59.0
FAN26G3134 Fragaria x ananassa HOM05D002593 ORTHO05D008082 6.1e-10 67.8 47 68.1
RcHm_v2.0_Chr3g0485541 Rosa chinensis HOM05D002593 ORTHO05D008082 6.1e-10 67.8 47 68.1
Hund15465 Selenicereus undatus HOM05D002593 ORTHO05D008082 6.1e-10 67.8 54 55.6
unitig_748.g7215 Utricularia gibba HOM05D002593 ORTHO05D008082 6.1e-10 67.8 47 68.1
HPP92_021910 Vanilla planifolia HOM05D002593 ORTHO05D008082 6.1e-10 67.8 45 62.2
A09p01180 Brassica napus HOM05D002593 ORTHO05D008082 1.0e-09 67.0 60 53.3
Glyma.10G139600 Glycine max HOM05D002593 ORTHO05D008082 1.0e-09 67.0 58 53.4
Gohir.A07G132500 Gossypium hirsutum HOM05D002593 ORTHO05D008082 1.0e-09 67.0 57 57.9
Gohir.D07G136800 Gossypium hirsutum HOM05D002593 ORTHO05D008082 1.4e-09 66.6 58 55.2
Gorai.001G148800 Gossypium raimondii HOM05D002593 ORTHO05D008082 1.4e-09 66.6 58 55.2
FAN28G0491 Fragaria x ananassa HOM05D002593 ORTHO05D008082 1.8e-09 66.2 47 68.1
Sed0017127 Sechium edule HOM05D002593 ORTHO05D008082 2.3e-09 65.9 59 54.2
THA.LOC104801335 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 3.0e-09 65.5 59 54.2
ATR0796G107 Amborella trichopoda HOM05D002593 ORTHO05D008082 3.9e-09 65.1 52 61.5
Hund08525 Selenicereus undatus HOM05D002593 ORTHO05D008082 5.1e-09 64.7 44 63.6
Mapoly0125s0022 Marchantia polymorpha HOM05D002593 ORTHO05D008082 4.3e-08 61.6 45 57.8
Atru.chr5.836 Acer truncatum HOM05D002593 ORTHO05D008082 3.7e-07 58.5 66 43.9
Aa31sc2117G10 Aethionema arabicum HOM05D002593 ORTHO05D008082 1.1e-06 57.0 53 43.4
SMO339G0046 Selaginella moellendorffii HOM05D002593 ORTHO05D008082 1.4e-06 56.6 66 39.4
Aa31LG5G1360 Aethionema arabicum HOM05D002593 ORTHO05D008082 1.8e-06 56.2 53 41.5
AagrBONN_evm.TU.Sc2ySwM_344.978 Anthoceros agrestis HOM05D002593 ORTHO05D008082 1.8e-06 56.2 39 61.5


User provided reference genes

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