Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.6e-107 392.1 202 100.0
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-89 333.6 193 90.2
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.5e-86 323.2 203 86.2
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-84 315.8 193 86.5
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-83 311.2 193 85.0
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.2e-78 294.3 202 77.2
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-71 273.1 199 70.4
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.6e-71 270.8 200 69.0
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.5e-70 269.2 204 67.6
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-68 263.5 193 75.6
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-67 259.6 202 65.3
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.3e-66 254.2 200 66.5
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-52 210.3 102 97.1
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-51 207.2 156 79.5
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-44 183.7 202 52.5
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.6e-43 179.5 174 56.9
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.1e-37 157.9 125 63.2
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.4e-34 147.9 171 49.7
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-26 124.0 186 45.2
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.4e-25 119.8 176 44.9
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 5.3e-20 102.1 171 41.5
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 3.2e-17 92.8 158 41.1
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.3e-15 87.4 114 41.2
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 2.5e-14 83.2 114 41.2
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.6e-13 80.5 114 40.4
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 1.8e-12 77.0 125 36.0
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.5e-11 73.9 133 39.8
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 1.5e-11 73.9 133 34.6
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 3.4e-11 72.8 103 40.8
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 5.8e-11 72.0 128 35.9
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 7.6e-11 71.6 168 36.3
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.3e-10 70.9 170 30.0
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.2e-10 70.1 106 39.6
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 3.8e-10 69.3 103 38.8
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 3.8e-10 69.3 109 33.9
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 3.8e-10 69.3 120 39.2
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 6.5e-10 68.6 112 40.2
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 6.5e-10 68.6 149 37.6
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 6.5e-10 68.6 138 38.4
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.4e-09 67.4 133 36.8
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.5e-09 66.6 133 39.1
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.2e-09 65.9 116 40.5
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 4.2e-09 65.9 123 32.5
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.1e-09 65.1 103 34.0
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 9.3e-09 64.7 137 35.8
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.2e-08 64.3 99 39.4
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.6e-08 63.9 114 37.7
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 1.6e-08 63.9 123 31.7
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.6e-08 63.9 108 37.0
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.7e-08 63.2 121 33.1
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.7e-08 63.2 154 29.2
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.5e-08 62.8 109 34.9
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.1e-08 62.0 94 36.2
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.3e-07 60.8 109 33.0
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 1.8e-07 60.5 131 34.4
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.8e-07 60.5 122 32.8
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 2.3e-07 60.1 112 37.5
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.9e-07 59.3 122 34.4
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 5.1e-07 58.9 136 32.4
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 5.1e-07 58.9 110 33.6
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 8.7e-07 58.2 115 33.9
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.1e-06 57.8 135 31.9
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.1e-06 57.8 106 34.0
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 1.1e-06 57.8 138 33.3
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 1.1e-06 57.8 138 33.3
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-06 57.4 97 34.0
Medtr3g082340 Medicago truncatula HOM05D009148 ORTHO05D011895 1.5e-06 57.4 122 39.3
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.5e-06 57.4 117 29.1
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-06 57.4 108 32.4
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.5e-06 57.4 115 31.3
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 1.9e-06 57.0 130 33.8
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.9e-06 57.0 145 31.7
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 2.5e-06 56.6 121 35.5
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 2.5e-06 56.6 96 37.5
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.5e-06 56.6 121 33.9
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.5e-06 56.6 136 33.8
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 3.3e-06 56.2 130 33.8
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 3.3e-06 56.2 149 34.2
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 4.3e-06 55.8 124 36.3
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 4.3e-06 55.8 124 36.3
AL304U10030 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 5.7e-06 55.5 139 29.5
CAN.G762.6 Capsicum annuum HOM05D008623 ORTHO05D007789 5.7e-06 55.5 113 35.4
Medtr3g082420 Medicago truncatula HOM05D009148 ORTHO05D011895 5.7e-06 55.5 173 34.1
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.7e-06 55.5 107 33.6
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.4e-06 55.1 110 33.6
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 7.4e-06 55.1 124 37.1
Migut.F00817 Erythranthe guttata HOM05D020956 ORTHO05D015643 7.4e-06 55.1 70 37.1
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 7.4e-06 55.1 120 30.8
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 9.7e-06 54.7 139 30.9


User provided reference genes

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