Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 2.6e-217 758.4 387 100.0
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 5.0e-168 594.7 330 91.2
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 8.8e-165 583.9 329 89.1
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 1.4e-159 566.6 367 81.2
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.2e-158 563.5 329 87.5
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 1.9e-151 539.7 329 83.0
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 4.7e-150 535.0 329 81.8
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 8.8e-149 530.8 330 82.4
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 1.7e-147 526.6 329 81.5
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 2.2e-147 526.2 329 81.2
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 6.3e-147 524.6 329 79.6
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 6.3e-147 524.6 331 79.8
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.1e-146 523.9 329 80.2
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 1.4e-146 523.5 337 76.6
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 2.4e-146 522.7 329 78.4
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 4.1e-146 521.9 329 80.2
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 7.0e-146 521.2 331 79.2
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.6e-145 520.0 329 79.9
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.3e-144 516.9 329 79.9
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 2.9e-144 515.8 329 78.7
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 5.0e-144 515.0 329 80.2
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 1.5e-143 513.5 334 77.2
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 3.2e-143 512.3 329 79.6
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 7.2e-143 511.1 327 77.7
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 9.4e-143 510.8 329 77.2
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 1.6e-142 510.0 329 78.1
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 2.7e-142 509.2 330 77.3
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.7e-142 509.2 326 77.6
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 4.7e-142 508.4 327 77.4
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 4.7e-142 508.4 330 77.9
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 1.4e-141 506.9 336 76.5
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 3.0e-141 505.8 330 77.0
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 3.0e-141 505.8 329 77.5
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 5.2e-141 505.0 337 74.5
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 8.8e-141 504.2 330 76.7
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 8.8e-141 504.2 329 77.2
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.2e-140 503.8 330 76.7
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 1.5e-140 503.4 329 77.5
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.0e-140 503.1 330 79.1
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 2.6e-140 502.7 330 76.7
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 3.4e-140 502.3 329 77.2
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 4.4e-140 501.9 336 75.6
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 7.5e-140 501.1 327 76.5
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 9.8e-140 500.7 329 76.0
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 1.3e-139 500.4 330 74.8
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.7e-139 500.0 330 76.1
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.2e-139 499.6 330 76.7
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 2.8e-139 499.2 337 75.1
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 4.8e-139 498.4 326 77.3
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 6.3e-139 498.0 330 76.7
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 8.3e-139 497.7 330 76.7
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 1.8e-138 496.5 330 76.1
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.8e-138 496.5 333 75.7
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.8e-138 496.5 330 76.4
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 3.1e-138 495.7 330 75.8
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 4.1e-138 495.4 329 76.6
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 7.0e-138 494.6 310 80.3
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 9.1e-138 494.2 329 74.8
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 1.2e-137 493.8 333 75.1
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 1.6e-137 493.4 330 73.3
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.0e-137 493.0 330 75.5
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 2.0e-137 493.0 330 73.3
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 2.0e-137 493.0 330 75.8
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 4.5e-137 491.9 333 74.5
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 3.8e-136 488.8 329 75.4
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 3.8e-136 488.8 321 76.0
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.5e-135 486.9 321 76.3
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 3.3e-135 485.7 332 73.8
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 3.3e-135 485.7 355 72.1
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 3.6e-134 482.3 329 76.0
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 8.0e-134 481.1 329 73.3
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 2.3e-133 479.6 350 71.1
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 4.0e-133 478.8 345 71.0
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 1.2e-132 477.2 334 71.3
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 3.7e-131 472.2 328 72.3
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 5.4e-130 468.4 390 65.1
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.0e-128 464.2 330 70.6
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 4.3e-127 458.8 319 73.7
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 4.4e-124 448.7 327 69.1
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 4.4e-124 448.7 282 80.9
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 3.9e-120 435.6 294 73.8
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.1e-119 434.1 329 69.9
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 4.0e-117 425.6 329 68.7
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.7e-112 410.2 329 65.7
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 3.0e-112 409.5 343 61.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 3.9e-112 409.1 337 62.3
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.2e-108 397.5 329 62.3
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 2.3e-104 383.3 331 56.5
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 5.1e-104 382.1 249 77.1
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 4.2e-98 362.5 199 89.4
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.8e-93 347.1 330 51.8
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 2.0e-92 343.6 243 70.4
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 3.5e-89 332.8 321 52.0
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.3e-88 330.9 194 82.5
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 9.9e-84 314.7 325 50.5
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 4.2e-82 309.3 179 84.4
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 5.1e-80 302.4 201 78.1
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.7e-78 296.2 325 46.8
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 1.5e-76 290.8 309 51.1
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 9.3e-74 281.6 241 64.7
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 2.3e-72 276.9 391 47.1
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.1e-66 258.1 325 42.5
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 4.2e-66 256.1 353 40.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 4.5e-60 236.1 169 68.6
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 1.4e-56 224.6 153 74.5
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.3e-47 193.4 170 51.2
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.1e-45 188.3 305 42.0
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.4e-45 188.0 283 43.1
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.5e-44 184.5 124 79.0
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 2.2e-43 180.6 343 33.2
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 3.2e-42 176.8 126 73.0
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.7e-30 137.9 89 77.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 5.2e-24 116.3 76 71.1
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 7.0e-21 105.9 335 28.1
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 9.8e-15 85.5 59 71.2
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 1.1e-13 82.0 155 40.0
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 1.1e-13 82.0 155 40.0
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 6.4e-06 56.2 35 74.3


User provided reference genes

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