Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.8e-109 399.4 224 100.0
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 1.3e-72 276.9 179 79.3
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 6.4e-67 258.1 170 75.9
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.4e-66 256.1 177 72.9
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 5.6e-63 245.0 175 70.3
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 4.7e-62 241.9 184 66.3
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 2.3e-61 239.6 166 72.3
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 5.2e-61 238.4 168 71.4
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 6.8e-61 238.0 161 72.7
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 5.8e-60 235.0 165 73.9
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 2.9e-59 232.6 176 67.6
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 6.4e-59 231.5 176 67.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 4.1e-58 228.8 180 67.2
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 4.1e-58 228.8 209 63.2
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 5.4e-58 228.4 169 69.8
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 5.4e-58 228.4 162 73.5
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.6e-57 226.9 186 60.8
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 1.0e-56 224.2 158 69.6
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 1.0e-56 224.2 176 65.9
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 5.1e-56 221.9 162 67.3
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 5.1e-56 221.9 175 66.9
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 6.6e-56 221.5 176 65.9
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 8.6e-56 221.1 173 63.0
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 1.9e-55 219.9 158 69.6
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 1.9e-55 219.9 178 62.9
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.3e-55 219.2 173 64.2
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 4.3e-55 218.8 171 66.1
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 1.2e-54 217.2 161 67.7
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 2.8e-54 216.1 173 63.0
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 4.7e-54 215.3 183 62.3
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 6.2e-54 214.9 165 64.8
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 6.2e-54 214.9 182 61.5
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 1.8e-53 213.4 166 65.1
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 8.9e-53 211.1 166 64.5
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 4.4e-52 208.8 161 64.0
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 4.4e-52 208.8 178 61.2
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 4.4e-52 208.8 166 63.9
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 5.8e-52 208.4 157 67.5
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 7.6e-52 208.0 165 63.0
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.7e-51 206.8 157 65.6
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 3.8e-51 205.7 165 65.5
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.8e-51 205.7 157 65.0
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 6.4e-51 204.9 145 70.3
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 6.4e-51 204.9 187 59.4
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 5.4e-50 201.8 161 64.0
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 7.1e-50 201.4 157 65.0
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.2e-49 200.7 162 63.6
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 1.2e-49 200.7 174 60.9
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.2e-49 200.7 157 63.7
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 1.6e-49 200.3 161 63.4
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.6e-49 200.3 157 64.3
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 2.1e-49 199.9 166 65.7
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 2.7e-49 199.5 162 61.1
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 2.7e-49 199.5 151 68.9
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 3.5e-49 199.1 165 61.8
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 4.6e-49 198.7 164 62.8
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 4.6e-49 198.7 161 61.5
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 1.0e-48 197.6 162 62.3
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.3e-48 197.2 161 60.9
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 3.0e-48 196.1 164 62.2
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 3.9e-48 195.7 153 63.4
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 6.6e-48 194.9 153 65.4
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 8.7e-48 194.5 165 61.2
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 8.7e-48 194.5 161 60.9
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.1e-47 194.1 162 63.0
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.1e-47 194.1 163 61.3
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.5e-47 193.7 161 61.5
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 1.5e-47 193.7 161 61.5
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.5e-47 193.7 161 61.5
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.5e-47 193.7 146 66.4
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 1.5e-47 193.7 162 61.1
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 2.5e-47 193.0 162 62.3
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 2.5e-47 193.0 161 59.6
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 3.3e-47 192.6 162 62.3
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 4.3e-47 192.2 164 62.2
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 5.6e-47 191.8 134 70.1
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 2.1e-46 189.9 161 59.6
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 2.1e-46 189.9 161 59.6
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 4.8e-46 188.7 170 58.2
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 2.4e-45 186.4 161 60.2
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 1.5e-44 183.7 165 57.6
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 2.4e-42 176.4 171 54.4
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.4e-42 176.4 148 62.8
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 6.6e-40 168.3 128 66.4
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.5e-39 167.2 161 55.3
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.3e-39 166.0 161 54.7
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.6e-38 162.5 170 52.4
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 2.2e-35 153.3 158 50.0
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 4.6e-33 145.6 153 48.4
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 3.0e-32 142.9 130 55.4
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 3.0e-32 142.9 158 46.8
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 5.6e-31 138.7 129 48.8
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 9.0e-29 131.3 163 42.9
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.4e-28 129.4 162 45.1
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.4e-28 129.4 162 45.1
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 1.1e-26 124.4 93 64.5
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 7.9e-25 118.2 113 55.8
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.0e-24 117.9 84 66.7
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 3.7e-22 109.4 176 38.6
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 1.2e-20 104.4 95 53.7
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 3.4e-20 102.8 71 69.0
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 2.2e-19 100.1 97 52.6
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.1e-13 81.3 53 71.7
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 1.8e-13 80.5 61 63.9
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 4.1e-13 79.3 70 61.4
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 1.1e-10 71.2 45 75.6
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 1.3e-06 57.8 82 43.9


User provided reference genes

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