Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 7.2e-72 273.9 144 100.0
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.5e-58 228.0 134 91.8
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 5.0e-57 224.6 123 95.1
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 8.0e-55 217.2 123 93.5
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 3.9e-25 118.6 130 58.5
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 5.6e-24 114.8 127 56.7
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 4.7e-23 111.7 127 56.7
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 9.0e-22 107.5 130 50.8
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.6e-21 105.9 130 54.6
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 7.6e-21 104.4 129 48.1
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 2.2e-20 102.8 128 52.3
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 3.8e-20 102.1 128 52.3
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 2.4e-19 99.4 127 55.1
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 7.1e-19 97.8 126 53.2
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 1.6e-18 96.7 127 52.0
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 2.7e-18 95.9 127 53.5
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 2.7e-18 95.9 130 52.3
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 7.8e-18 94.4 126 52.4
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 7.8e-18 94.4 129 52.7
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 1.0e-17 94.0 132 53.0
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 1.0e-17 94.0 132 53.0
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 1.3e-17 93.6 125 53.6
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 1.7e-17 93.2 132 53.0
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 6.6e-17 91.3 127 51.2
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 8.7e-17 90.9 123 50.4
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 2.5e-16 89.4 130 46.9
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 2.5e-16 89.4 132 49.2
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 3.3e-16 89.0 132 48.5
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 3.3e-16 89.0 132 50.0
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 3.3e-16 89.0 132 49.2
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 1.6e-15 86.7 135 48.9
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 4.8e-15 85.1 121 47.9
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 4.8e-15 85.1 135 47.4
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 4.8e-15 85.1 132 47.7
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 1.1e-14 84.0 127 48.8
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 1.1e-14 84.0 125 46.4
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.1e-14 84.0 130 47.7
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 1.4e-14 83.6 70 61.4
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 1.4e-14 83.6 127 45.7
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 2.4e-14 82.8 118 44.9
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 2.4e-14 82.8 129 49.6
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.4e-14 82.8 130 48.5
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 3.1e-14 82.4 99 49.5
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 4.0e-14 82.0 128 46.1
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 4.0e-14 82.0 122 47.5
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 4.0e-14 82.0 134 47.0
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 5.3e-14 81.6 130 45.4
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 5.3e-14 81.6 130 47.7
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 6.9e-14 81.3 127 47.2
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 6.9e-14 81.3 71 54.9
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 1.2e-13 80.5 136 47.8
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.2e-13 80.5 107 49.5
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.5e-13 80.1 124 47.6
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 3.4e-13 79.0 143 45.5
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 3.4e-13 79.0 130 46.2
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 4.5e-13 78.6 128 45.3
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 4.5e-13 78.6 86 50.0
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 4.5e-13 78.6 131 45.8
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 5.8e-13 78.2 139 42.4
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 5.8e-13 78.2 126 47.6
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 5.8e-13 78.2 126 47.6
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 7.6e-13 77.8 142 42.3
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 7.6e-13 77.8 133 44.4
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.3e-12 77.0 136 46.3
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 2.2e-12 76.3 123 40.7
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.2e-12 76.3 77 50.6
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 2.9e-12 75.9 121 43.0
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 3.8e-12 75.5 131 46.6
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 3.8e-12 75.5 130 45.4
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 6.4e-12 74.7 97 46.4
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 6.4e-12 74.7 127 44.1
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 6.4e-12 74.7 128 43.8
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 8.4e-12 74.3 107 45.8
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 1.4e-11 73.6 113 45.1
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 1.4e-11 73.6 53 64.2
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 1.9e-11 73.2 145 44.1
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 2.4e-11 72.8 133 43.6
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 2.4e-11 72.8 104 45.2
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 3.2e-11 72.4 88 45.5
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 9.3e-11 70.9 60 58.3
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 1.2e-10 70.5 122 42.6
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 1.2e-10 70.5 129 41.1
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 1.6e-10 70.1 131 42.0
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 4.6e-10 68.6 112 43.8
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 7.9e-10 67.8 137 40.1
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 7.9e-10 67.8 137 40.1
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 7.9e-10 67.8 137 40.1
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 7.9e-10 67.8 139 41.0
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 7.9e-10 67.8 138 37.7
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 1.8e-09 66.6 118 42.4
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 1.8e-09 66.6 129 41.1
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.3e-09 66.2 53 56.6
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 3.0e-09 65.9 119 44.5
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 3.9e-09 65.5 137 40.1
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 3.9e-09 65.5 137 40.1
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 1.5e-08 63.5 95 46.3
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 1.9e-08 63.2 125 40.8
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 3.3e-08 62.4 131 41.2
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 5.6e-08 61.6 125 40.8
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 1.6e-07 60.1 125 39.2
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 2.1e-07 59.7 111 47.7
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 4.0e-06 55.5 116 36.2


User provided reference genes

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