Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.4e-141 504.6 252 100.0
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.6e-138 494.6 252 98.4
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 8.9e-126 453.8 252 91.3
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.0e-113 413.7 252 85.3
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.1e-96 357.1 249 73.9
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.5e-96 356.7 252 73.4
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 3.1e-94 349.0 254 70.1
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 9.6e-88 327.4 274 64.2
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 2.5e-83 312.8 257 62.3
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 1.5e-80 303.5 246 64.6
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 7.4e-80 301.2 250 64.4
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 9.7e-80 300.8 247 63.2
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.3e-79 300.4 250 64.0
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.6e-79 300.1 251 62.5
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 2.4e-78 296.2 247 62.8
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 4.1e-78 295.4 247 62.3
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 6.9e-78 294.7 247 62.8
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.2e-77 293.9 257 59.9
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 1.2e-77 293.9 186 77.4
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.5e-77 293.5 203 71.9
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 1.5e-77 293.5 258 60.9
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 1.5e-77 293.5 248 63.3
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 4.5e-77 292.0 248 63.3
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 5.9e-77 291.6 248 62.5
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 7.7e-77 291.2 247 60.7
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.0e-76 290.8 252 61.1
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 1.0e-76 290.8 252 60.3
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 2.2e-76 289.7 251 61.4
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.9e-76 289.3 247 62.3
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 3.8e-76 288.9 248 61.3
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 3.2e-75 285.8 253 60.1
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.2e-74 283.9 271 58.3
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 2.1e-74 283.1 218 69.3
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 2.7e-74 282.7 251 61.4
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 3.6e-74 282.3 250 59.2
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 4.6e-74 282.0 251 60.2
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.0e-73 280.8 246 59.8
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 1.4e-73 280.4 249 60.6
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 3.0e-73 279.3 203 69.5
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 3.9e-73 278.9 214 67.3
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 5.1e-73 278.5 229 64.6
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 6.7e-73 278.1 255 57.3
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 6.7e-73 278.1 191 73.3
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 8.8e-73 277.7 248 62.1
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 2.0e-72 276.6 187 71.7
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 5.7e-72 275.0 253 58.1
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 9.7e-72 274.2 202 68.3
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.3e-71 273.9 257 59.1
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.3e-71 273.9 249 58.2
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 1.3e-71 273.9 242 60.7
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 2.2e-71 273.1 188 71.8
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 3.7e-71 272.3 254 56.7
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 3.7e-71 272.3 251 60.2
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 4.8e-71 271.9 249 58.2
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 8.2e-71 271.2 250 59.6
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 1.1e-70 270.8 246 56.1
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.1e-70 270.8 219 63.9
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.1e-70 270.8 257 58.4
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 1.4e-70 270.4 230 58.3
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.4e-70 270.4 219 63.5
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 1.4e-70 270.4 228 62.3
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 3.1e-70 269.2 254 57.9
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 5.3e-70 268.5 189 69.8
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 5.3e-70 268.5 255 57.6
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.9e-70 268.1 219 63.5
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.2e-69 267.3 248 58.1
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 2.6e-69 266.2 248 57.3
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 4.5e-69 265.4 258 55.8
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 2.2e-68 263.1 172 78.5
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 3.8e-68 262.3 237 58.6
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 8.5e-68 261.2 234 59.4
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 3.2e-67 259.2 235 57.0
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 9.4e-67 257.7 224 61.6
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.1e-64 250.8 203 62.6
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 2.2e-63 246.5 251 55.4
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 3.7e-63 245.7 214 57.0
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 4.5e-61 238.8 181 63.0
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.9e-60 236.1 253 50.6
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 9.4e-59 231.1 229 55.5
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 3.6e-58 229.2 186 61.8
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 6.1e-58 228.4 227 54.2
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 1.0e-57 227.6 191 61.8
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.4e-57 227.3 191 61.8
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 3.0e-57 226.1 241 52.3
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 3.9e-57 225.7 237 51.9
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 6.7e-57 224.9 192 59.9
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 6.7e-57 224.9 192 59.9
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 8.8e-57 224.6 224 54.9
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 2.0e-56 223.4 191 61.3
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 2.0e-56 223.4 150 72.7
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 4.4e-56 222.2 222 54.5
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 1.3e-55 220.7 144 72.9
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 1.1e-54 217.6 236 51.3
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 9.1e-54 214.5 192 58.9
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 2.9e-52 209.5 183 55.2
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 3.8e-52 209.1 244 46.3
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 2.1e-50 203.4 184 53.8
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 2.7e-50 203.0 180 52.8
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 8.0e-50 201.4 245 47.3
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 1.7e-44 183.7 182 47.8
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.5e-43 180.6 194 46.9
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.9e-43 180.3 191 51.3
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 4.2e-43 179.1 257 45.5
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 6.1e-42 175.3 190 46.3
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 3.0e-41 172.9 224 43.8
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 2.5e-35 153.3 154 54.5
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 7.2e-35 151.8 263 36.9
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 9.8e-32 141.4 148 54.1
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 3.7e-31 139.4 189 47.1
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 4.5e-29 132.5 87 74.7
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.6e-26 124.0 182 39.6
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-24 117.9 86 65.1
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 4.7e-18 95.9 161 37.3
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 4.0e-17 92.8 107 43.0
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 1.2e-16 91.3 67 64.2
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 2.1e-13 80.5 127 36.2
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 3.6e-10 69.7 76 46.1
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 3.1e-09 66.6 91 41.8
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 3.2e-06 56.6 62 50.0
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.2e-06 56.6 123 33.3


User provided reference genes

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