Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 0.0e+00 1300.8 737 100.0
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 4.9e-217 758.4 773 62.9
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.3e-212 743.8 880 58.5
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 8.2e-196 688.0 919 52.4
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 2.7e-178 629.8 942 49.8
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 4.2e-168 595.9 808 51.1
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 7.3e-160 568.5 793 50.3
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.1e-152 544.7 865 46.2
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 1.5e-149 534.3 831 48.9
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 1.0e-145 521.5 893 44.3
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 8.9e-142 508.4 722 47.0
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 7.1e-139 498.8 810 44.4
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.5e-136 491.1 808 47.6
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 2.8e-135 486.9 606 52.0
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 2.8e-135 486.9 830 42.8
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 3.1e-134 483.4 780 44.4
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 6.8e-134 482.3 830 42.5
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 1.2e-133 481.5 772 47.0
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 2.6e-133 480.3 751 45.4
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 4.4e-133 479.6 753 45.8
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 7.8e-130 468.8 795 44.0
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.9e-129 466.5 759 47.0
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 4.3e-128 463.0 822 42.8
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 5.6e-128 462.6 795 43.0
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 9.6e-128 461.8 800 42.2
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 2.8e-127 460.3 803 42.7
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 8.1e-127 458.8 759 46.4
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.1e-126 458.4 806 42.9
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 5.3e-126 456.1 770 46.0
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.5e-125 454.5 761 45.5
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 2.6e-125 453.8 781 44.3
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 4.4e-125 453.0 770 46.0
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 2.9e-124 450.3 778 46.3
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 6.4e-124 449.1 769 44.3
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 8.4e-124 448.7 772 43.1
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 6.0e-122 442.6 765 43.5
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 3.0e-121 440.3 808 42.3
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.5e-120 438.0 768 46.6
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 1.6e-119 434.5 863 44.0
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 2.8e-119 433.7 791 44.6
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 4.8e-119 433.0 882 41.3
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 8.1e-119 432.2 834 43.4
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 3.4e-117 426.8 781 43.3
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 1.3e-116 424.9 780 45.6
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 2.2e-116 424.1 539 53.2
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 1.4e-115 421.4 781 43.0
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.6e-114 417.9 781 43.5
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 6.0e-114 416.0 816 43.9
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 2.3e-113 414.1 783 42.8
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 3.0e-113 413.7 827 43.0
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.5e-112 410.6 789 43.6
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 5.6e-112 409.5 793 45.6
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 6.2e-111 406.0 823 39.6
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.4e-110 404.8 791 41.1
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 1.4e-110 404.8 788 43.5
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 3.1e-110 403.7 810 43.7
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 4.0e-110 403.3 767 41.7
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 1.2e-109 401.7 630 45.9
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 1.5e-109 401.4 782 44.5
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 2.9e-108 397.1 895 40.8
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 1.0e-105 388.7 613 45.5
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 3.9e-105 386.7 830 41.7
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.9e-104 384.4 616 45.0
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 1.4e-102 378.3 792 41.9
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 4.1e-102 376.7 825 42.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.7e-100 371.3 577 48.5
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 1.2e-98 365.2 845 38.1
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.1e-98 364.4 817 42.7
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 7.9e-98 362.5 840 37.6
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.3e-97 361.7 800 41.6
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 1.5e-96 358.2 861 37.4
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 8.2e-95 352.4 793 39.6
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.4e-94 350.9 566 45.9
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.4e-94 350.9 566 45.9
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 2.2e-92 344.4 723 41.5
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 8.5e-92 342.4 603 44.1
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.7e-87 328.2 603 44.1
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 2.2e-84 317.8 749 38.5
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 4.1e-78 297.0 299 61.5
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 3.3e-72 277.3 755 34.4
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 8.2e-71 272.7 694 36.3
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 5.9e-69 266.5 764 34.0
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 1.3e-68 265.4 608 39.0
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 3.8e-68 263.8 637 36.3
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 6.8e-65 253.1 806 32.3
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 2.0e-64 251.5 616 39.0
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 9.8e-64 249.2 612 36.8
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.7e-63 248.4 623 37.6
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 2.8e-63 247.7 621 38.0
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.8e-62 245.0 764 33.2
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.6e-61 241.9 811 34.4
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.6e-61 241.9 615 36.3
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 5.9e-61 240.0 712 36.1
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 4.2e-59 233.8 622 38.1
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 4.2e-59 233.8 622 38.1
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.4e-57 228.8 627 37.0
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 5.2e-57 226.9 821 33.4
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 1.5e-56 225.3 822 33.7
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 3.4e-56 224.2 406 39.2
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 5.7e-56 223.4 711 35.7
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 2.2e-55 221.5 620 34.7
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 7.7e-53 213.0 747 30.7
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 4.7e-50 203.8 763 32.1
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 5.7e-48 196.8 546 35.9
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 4.3e-43 180.6 415 38.8
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 2.3e-41 174.9 612 30.1
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 1.7e-39 168.7 198 52.0
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 5.0e-36 157.1 150 63.3
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 2.4e-30 138.3 581 29.8
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 7.1e-30 136.7 628 27.5
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 7.1e-30 136.7 628 27.5
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 2.7e-29 134.8 504 31.5
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 7.3e-27 126.7 510 30.4
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.5e-19 102.4 179 40.8
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 1.1e-11 76.3 272 35.7
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 1.8e-09 68.9 150 36.0
Actinidia29829 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.4e-06 59.3 98 44.9
Oeu016743.1 Olea europaea HOM05D002134 ORTHO05D008658 5.4e-06 57.4 192 32.8


User provided reference genes

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