Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 4.4e-65 251.5 165 100.0
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.7e-61 239.6 138 98.6
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 6.2e-59 231.1 138 94.2
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 6.6e-45 184.5 151 74.8
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 1.1e-44 183.7 149 75.2
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 1.2e-41 173.7 135 75.6
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 1.2e-41 173.7 135 70.4
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 7.6e-41 171.0 131 77.9
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 3.2e-39 165.6 135 68.1
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 5.4e-39 164.9 135 72.6
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 5.4e-39 164.9 135 74.8
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 7.1e-39 164.5 135 73.3
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 2.1e-38 162.9 135 70.4
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 2.1e-38 162.9 135 72.6
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 2.1e-38 162.9 135 72.6
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 2.1e-38 162.9 137 72.3
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 3.5e-38 162.2 135 71.9
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 3.5e-38 162.2 135 72.6
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 4.6e-38 161.8 135 72.6
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 7.8e-38 161.0 135 72.6
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 1.0e-37 160.6 135 70.4
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 1.0e-37 160.6 136 71.3
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.3e-37 160.2 135 67.4
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.3e-37 160.2 135 67.4
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.3e-37 160.2 135 65.2
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 1.7e-37 159.8 135 71.1
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 1.7e-37 159.8 135 71.1
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 1.7e-37 159.8 131 74.8
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 2.3e-37 159.5 151 66.2
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 3.0e-37 159.1 135 66.7
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 3.0e-37 159.1 135 66.7
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 3.9e-37 158.7 135 69.6
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 8.6e-37 157.5 135 71.1
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 1.5e-36 156.8 135 71.1
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 1.5e-36 156.8 135 70.4
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 3.3e-36 155.6 135 61.5
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 4.3e-36 155.2 135 70.4
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 7.3e-36 154.5 135 68.9
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 7.3e-36 154.5 135 68.9
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 1.2e-35 153.7 133 70.7
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 2.1e-35 152.9 135 68.9
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 2.8e-35 152.5 135 68.9
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 3.6e-35 152.1 135 69.6
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 6.2e-35 151.4 139 64.7
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 6.2e-35 151.4 132 68.9
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 6.2e-35 151.4 135 68.1
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 6.2e-35 151.4 135 60.0
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 8.1e-35 151.0 151 65.6
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 1.1e-34 150.6 140 66.4
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 1.1e-34 150.6 135 68.1
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 3.1e-34 149.1 135 68.1
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 6.9e-34 147.9 135 64.4
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 8.9e-34 147.5 135 68.1
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 2.0e-33 146.4 135 67.4
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 9.9e-33 144.1 135 64.4
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 1.7e-32 143.3 137 64.2
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 2.9e-32 142.5 135 66.7
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 2.9e-32 142.5 139 62.6
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 3.8e-32 142.1 137 64.2
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 3.8e-32 142.1 135 66.7
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 3.8e-32 142.1 151 60.3
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 4.9e-32 141.7 133 64.7
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 4.9e-32 141.7 134 67.2
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 6.4e-32 141.4 135 65.2
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 6.4e-32 141.4 135 62.2
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 1.1e-31 140.6 135 62.2
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 2.4e-31 139.4 138 65.2
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 4.2e-31 138.7 135 57.0
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 3.0e-29 132.5 135 61.5
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 3.9e-29 132.1 126 66.7
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 6.6e-29 131.3 135 62.2
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 1.5e-28 130.2 135 62.2
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 1.9e-28 129.8 135 60.0
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 2.5e-28 129.4 135 61.5
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 3.3e-28 129.0 135 60.7
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 4.3e-28 128.6 135 65.2
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 4.3e-28 128.6 136 61.0
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 7.3e-28 127.9 135 60.7
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 9.6e-28 127.5 151 57.6
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 1.3e-27 127.1 135 59.3
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 2.1e-27 126.3 138 58.7
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 2.1e-27 126.3 138 58.7
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 2.1e-27 126.3 138 58.7
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 2.1e-27 126.3 138 59.4
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 2.8e-27 125.9 137 58.4
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 2.8e-27 125.9 151 57.6
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 3.6e-27 125.6 135 60.7
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 4.8e-27 125.2 138 58.0
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 4.8e-27 125.2 138 58.0
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.1e-26 124.0 135 60.0
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 5.3e-26 121.7 151 56.3
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 2.0e-25 119.8 151 57.6
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 2.9e-24 115.9 140 54.3
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 3.8e-24 115.5 137 55.5
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 3.8e-24 115.5 116 56.9
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 6.4e-24 114.8 135 51.9
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.1e-23 114.0 135 58.5
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 1.4e-23 113.6 136 56.6
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 1.9e-23 113.2 135 55.6
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 1.9e-23 113.2 115 56.5
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 2.4e-23 112.8 137 55.5
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 9.3e-23 110.9 116 55.2
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 1.6e-22 110.2 138 52.9
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 1.6e-22 110.2 138 52.9
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 2.7e-22 109.4 138 52.9
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 2.7e-22 109.4 138 52.9
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 2.7e-22 109.4 138 52.9
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 2.7e-22 109.4 151 54.3
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 7.9e-22 107.8 151 53.6
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 1.3e-21 107.1 134 56.7
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 2.3e-21 106.3 151 52.3
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 1.5e-20 103.6 151 53.0
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 1.9e-20 103.2 134 53.0
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 1.9e-20 103.2 138 57.2
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 2.8e-19 99.4 132 45.5
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 1.2e-17 94.0 109 56.9
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 7.6e-17 91.3 87 62.1
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 1.7e-16 90.1 107 57.9
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 8.4e-16 87.8 104 55.8
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 4.2e-15 85.5 67 65.7
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 9.3e-15 84.3 135 45.9
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 1.8e-13 80.1 108 55.6
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 3.0e-13 79.3 84 54.8
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 1.1e-12 77.4 84 53.6
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 1.5e-12 77.0 84 53.6
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 1.3e-11 73.9 79 51.9
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 1.3e-11 73.9 105 44.8
Lalb_Chr14g0364061 Lupinus albus HOM05D005729 ORTHO05D007026 2.8e-11 72.8 59 81.4
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 1.0e-08 64.3 59 59.3
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 2.2e-08 63.2 86 50.0
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 1.9e-07 60.1 103 45.6
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 4.6e-06 55.5 62 53.2
FvH4_3g27021 Fragaria vesca HOM05D005729 ORTHO05D007026 4.6e-06 55.5 63 50.8


User provided reference genes

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