Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 3.7e-171 604.7 301 100.0
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 4.5e-132 474.9 285 86.7
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 7.6e-132 474.2 283 85.2
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 7.6e-132 474.2 283 86.2
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 8.4e-131 470.7 252 92.1
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 7.4e-127 457.6 282 81.9
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 3.4e-124 448.7 262 85.1
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 1.7e-123 446.4 283 78.4
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 1.4e-122 443.4 274 82.1
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 1.9e-122 443.0 286 78.0
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 4.2e-122 441.8 286 77.6
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 4.2e-122 441.8 263 83.3
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.6e-121 439.9 283 79.2
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 3.5e-121 438.7 288 78.1
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 6.0e-121 438.0 263 81.7
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 7.9e-121 437.6 251 85.7
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 6.7e-120 434.5 266 81.6
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 1.5e-119 433.3 256 83.6
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.5e-119 433.3 256 83.6
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.5e-119 433.3 256 83.6
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 2.5e-119 432.6 259 81.9
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 5.7e-119 431.4 253 83.8
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 9.7e-119 430.6 256 82.8
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 1.6e-118 429.9 251 83.3
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 1.6e-118 429.9 251 83.3
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 2.8e-118 429.1 259 80.7
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 2.8e-118 429.1 250 83.6
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 2.8e-118 429.1 250 83.6
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 2.8e-118 429.1 280 77.9
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 6.3e-118 427.9 251 82.1
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 1.1e-117 427.2 250 82.4
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 2.4e-117 426.0 253 81.8
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 4.1e-117 425.2 282 76.6
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 5.3e-117 424.9 275 78.5
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 6.9e-117 424.5 278 77.7
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 1.2e-116 423.7 253 81.0
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 1.2e-116 423.7 257 80.9
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.5e-116 423.3 258 81.8
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 2.0e-116 422.9 259 79.2
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 2.6e-116 422.5 286 74.8
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 2.6e-116 422.5 275 76.4
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 3.4e-116 422.2 263 78.3
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 5.9e-116 421.4 239 84.5
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 7.6e-116 421.0 283 74.9
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 7.6e-116 421.0 283 74.9
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 7.6e-116 421.0 283 74.9
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 7.6e-116 421.0 283 73.9
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 2.2e-115 419.5 282 74.5
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 2.9e-115 419.1 238 84.5
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 2.9e-115 419.1 242 83.5
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 3.8e-115 418.7 238 84.0
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 5.0e-115 418.3 240 82.9
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 8.5e-115 417.5 236 84.3
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 8.5e-115 417.5 238 83.2
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 1.1e-114 417.2 277 74.7
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 1.1e-114 417.2 236 84.3
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 1.1e-114 417.2 238 84.5
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 1.9e-114 416.4 283 73.5
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 1.9e-114 416.4 289 74.7
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 1.9e-114 416.4 277 75.5
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 1.9e-114 416.4 269 77.0
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 1.9e-114 416.4 287 73.9
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 2.5e-114 416.0 283 76.0
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 2.5e-114 416.0 238 83.2
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 4.2e-114 415.2 282 74.1
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 4.2e-114 415.2 239 82.0
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 5.5e-114 414.8 276 76.4
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 7.2e-114 414.5 268 78.4
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 1.6e-113 413.3 255 80.8
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 6.1e-113 411.4 255 79.6
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 7.9e-113 411.0 254 78.7
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 1.4e-112 410.2 256 80.5
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 1.8e-112 409.8 238 82.8
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 2.3e-112 409.5 250 79.6
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 2.3e-112 409.5 236 82.6
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 8.8e-112 407.5 239 82.0
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 8.8e-112 407.5 274 74.5
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.3e-111 405.2 256 79.3
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 5.7e-111 404.8 234 81.6
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 7.4e-111 404.4 288 70.5
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 7.4e-111 404.4 239 80.3
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 3.7e-110 402.1 274 74.8
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 4.8e-110 401.7 282 73.0
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 6.3e-110 401.4 253 77.5
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 8.2e-110 401.0 260 76.5
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 1.1e-109 400.6 270 73.3
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 1.4e-109 400.2 253 77.5
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 1.8e-109 399.8 284 71.8
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 2.4e-109 399.4 271 74.5
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 5.3e-109 398.3 250 77.6
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 5.3e-109 398.3 239 79.9
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 6.9e-109 397.9 281 71.2
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 1.5e-108 396.7 275 73.1
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 2.6e-108 396.0 254 75.2
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 4.5e-108 395.2 222 86.0
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 8.5e-107 391.0 296 69.9
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 9.4e-106 387.5 286 68.2
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 1.6e-105 386.7 237 79.3
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 2.7e-105 386.0 239 78.7
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 1.0e-104 384.0 237 75.5
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 1.4e-104 383.6 255 72.9
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 2.6e-103 379.4 223 81.6
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 3.3e-103 379.0 260 73.5
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 8.2e-102 374.4 374 56.1
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 8.2e-102 374.4 243 74.1
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.9e-98 363.2 225 77.8
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 3.9e-96 355.5 283 65.4
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 8.2e-94 347.8 225 75.1
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 5.3e-93 345.1 257 67.7
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 5.9e-92 341.7 255 68.2
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 2.5e-90 336.3 243 69.5
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 2.5e-90 336.3 241 66.0
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 2.3e-88 329.7 239 67.8
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 2.6e-87 326.2 254 63.8
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 4.8e-86 322.0 189 81.5
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 7.0e-85 318.2 235 65.1
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 9.1e-85 317.8 216 74.5
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.6e-81 307.0 177 82.5
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 3.0e-80 302.8 240 65.0
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 7.5e-79 298.1 238 59.7
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 1.0e-75 287.7 224 65.6
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 5.0e-75 285.4 207 67.1
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 4.2e-74 282.3 262 55.7
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 2.8e-65 253.1 282 48.9
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 1.4e-64 250.8 221 58.4
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 2.2e-62 243.4 254 52.0
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.2e-60 237.7 168 73.2
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 2.1e-57 226.9 215 54.0
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 6.2e-57 225.3 147 77.6
MD17G1099100 Malus domestica HOM05D004677 ORTHO05D005746 9.8e-55 218.0 124 87.1
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 7.0e-53 211.8 285 44.2
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 4.7e-49 199.1 106 85.8
CDE08G1094 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 2.3e-48 196.8 125 76.8
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 1.5e-47 194.1 229 42.4
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 8.6e-43 178.3 220 41.8
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 3.6e-41 172.9 219 42.9
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 6.0e-36 155.6 115 66.1
Nn1g04350 Nelumbo nucifera HOM05D004677 ORTHO05D005746 3.0e-35 153.3 84 86.9
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 5.1e-35 152.5 87 78.2
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 2.2e-30 137.1 120 57.5
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 3.5e-28 129.8 143 49.7
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 3.1e-24 116.7 100 61.0
Cre06.g258600 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 4.5e-23 112.8 250 31.6
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 4.5e-23 112.8 85 67.1
Nn3g18971 Nelumbo nucifera HOM05D004677 ORTHO05D005746 2.9e-22 110.2 64 78.1
AagrBONN_evm.TU.Sc2ySwM_117.4165 Anthoceros agrestis HOM05D004677 ORTHO05D005746 5.8e-15 85.9 86 52.3
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 4.9e-14 82.8 179 37.4
FAN09G2974 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.1e-13 79.0 42 85.7
Aqoxy5G02648 Aquilegia oxysepala HOM05D003774 ORTHO05D009174 9.6e-10 68.6 233 27.9
Nitab4.5_0001463g0050 Nicotiana tabacum HOM05D003774 ORTHO05D009174 1.1e-08 65.1 223 27.8
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 3.1e-08 63.5 211 27.5
AUR62023544 Chenopodium quinoa HOM05D003774 ORTHO05D009174 6.9e-08 62.4 229 26.6
Gohir.D13G122800 Gossypium hirsutum HOM05D003774 ORTHO05D009174 9.0e-08 62.0 243 25.9
Gorai.013G137800 Gossypium raimondii HOM05D003774 ORTHO05D009174 9.0e-08 62.0 243 25.9
Atru.chr13.2367 Acer truncatum HOM05D003774 ORTHO05D009174 1.2e-07 61.6 243 25.9
Rhsim11G0052900 Rhododendron simsii HOM05D003774 ORTHO05D009174 1.2e-07 61.6 225 29.8
MD08G1217800 Malus domestica HOM05D003774 ORTHO05D009174 1.5e-07 61.2 236 27.1
arahy.Tifrunner.gnm1.ann1.G1NRGV Arachis hypogaea HOM05D004677 ORTHO05D005746 2.0e-07 60.8 69 44.9
COL.COLO4_24651 Corchorus olitorius HOM05D003774 ORTHO05D009174 4.5e-07 59.7 245 24.9
arahy.Tifrunner.gnm1.ann1.LRB7BH Arachis hypogaea HOM05D004677 ORTHO05D005746 5.8e-07 59.3 67 46.3
arahy.Tifrunner.gnm1.ann1.WARH89 Arachis hypogaea HOM05D004677 ORTHO05D005746 7.6e-07 58.9 28 92.9
Lsat_1_v5_gn_1_25820 Lactuca sativa HOM05D003774 ORTHO05D009174 1.7e-06 57.8 246 26.0
CANSAT25G3020 Cannabis sativa HOM05D003774 ORTHO05D009174 2.9e-06 57.0 232 28.0
Potri.019G079000 Populus trichocarpa HOM05D003774 ORTHO05D009174 2.9e-06 57.0 248 28.6
MBI09_g10676_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D009174 4.9e-06 56.2 223 26.5
Prupe.1G555600 Prunus persica HOM05D003774 ORTHO05D009174 6.5e-06 55.8 229 27.9
RcHm_v2.0_Chr7g0227151 Rosa chinensis HOM05D003774 ORTHO05D009174 8.4e-06 55.5 229 28.4
TWI59G1355 Tripterygium wilfordii HOM05D003774 ORTHO05D009174 8.4e-06 55.5 206 30.1


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