Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.6e-193 679.1 315 100.0
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.4e-191 671.4 315 98.7
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.7e-190 669.1 315 98.4
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.9e-170 602.4 315 88.6
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.3e-155 553.1 315 84.8
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.0e-59 232.6 385 36.6
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.5e-58 229.2 385 35.6
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 8.4e-57 224.9 385 36.6
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.9e-55 218.4 290 40.0
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.0e-51 206.1 372 33.6
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 4.5e-50 202.6 297 40.7
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.4e-43 180.3 219 41.1
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 3.8e-41 172.9 399 30.8
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-40 169.5 394 30.5
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-39 167.9 406 31.3
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 7.4e-37 158.7 402 29.4
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 6.9e-35 152.1 384 31.2
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-34 151.0 392 31.1
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.5e-34 149.4 340 32.1
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 6.1e-31 139.0 365 28.5
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 9.7e-29 131.7 355 28.2
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 2.2e-28 130.6 208 32.7
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.2e-28 128.6 385 27.5
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-27 127.5 318 31.4
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.2e-26 124.8 385 26.2
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-26 124.4 333 29.7
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.9e-26 122.5 363 27.8
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.9e-25 120.2 218 34.9
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 3.8e-25 119.8 367 25.3
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 3.8e-25 119.8 217 33.2
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.5e-25 119.0 217 33.2
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.4e-24 117.9 209 33.5
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 1.9e-24 117.5 197 32.5
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 4.2e-24 116.3 221 33.9
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 4.2e-24 116.3 384 23.4
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.2e-24 116.3 217 31.3
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 5.5e-24 115.9 215 32.6
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 7.2e-24 115.5 206 33.0
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.2e-23 114.8 218 33.9
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.6e-23 114.4 215 33.5
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 2.1e-23 114.0 213 33.3
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 2.1e-23 114.0 369 29.0
Hund19676 Selenicereus undatus HOM05D007560 ORTHO05D005947 2.1e-23 114.0 397 24.4
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.7e-23 113.6 218 31.2
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.1e-23 112.5 206 33.5
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.4e-22 111.3 222 32.0
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.8e-22 110.9 165 38.2
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.3e-22 110.5 156 36.5
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.0e-22 110.2 230 30.4
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.0e-22 110.2 222 33.8
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 8.8e-22 108.6 222 31.1
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.1e-21 108.2 340 28.8
Nitab4.5_0009688g0040 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.6e-21 107.1 293 28.7
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 1.3e-20 104.8 216 31.9
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.7e-20 104.4 209 34.4
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.1e-19 101.7 352 26.1
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.1e-19 101.7 208 33.2
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-19 100.9 209 31.6
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 1.2e-18 98.2 240 30.0
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.6e-18 97.8 216 34.7
COL.COLO4_03807 Corchorus olitorius HOM05D023542 ORTHO05D005947 1.7e-17 94.4 272 29.8
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-17 94.4 68 61.8
Actinidia01719 Actinidia chinensis HOM05D007560 ORTHO05D005947 2.9e-17 93.6 117 42.7
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.0e-17 92.8 147 35.4
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 1.9e-16 90.9 153 34.6
COL.COLO4_03806 Corchorus olitorius HOM05D023542 ORTHO05D005947 4.2e-16 89.7 176 30.7
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-16 89.7 215 31.6
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.5e-16 89.4 342 24.3
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 5.5e-16 89.4 164 32.9
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 7.2e-16 89.0 217 30.0
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 7.2e-16 89.0 222 28.4
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.1e-15 87.4 194 28.4
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 6.1e-15 85.9 162 30.9
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 8.0e-15 85.5 101 42.6
Aqoxy5G01909 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.4e-14 84.7 411 22.4
Lj6C626T9 Lonicera japonica HOM05D007560 ORTHO05D005947 6.7e-14 82.4 68 54.4
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.7e-14 82.4 213 26.8
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.6e-13 80.5 141 35.5
PSO421G0214 Papaver somniferum HOM05D008691 ORTHO05D005947 2.6e-13 80.5 199 33.2
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.4e-13 79.7 213 26.3
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 7.5e-13 79.0 193 30.1
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 1.3e-12 78.2 158 32.3
PSO478G1223 Papaver somniferum HOM05D008691 ORTHO05D005947 1.3e-12 78.2 217 33.6
Lj5E336G0 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-12 77.8 68 57.4
Peaxi162Scf00738g00002 Petunia axillaris HOM05D007560 ORTHO05D005947 3.7e-12 76.6 202 29.2
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 1.4e-11 74.7 154 27.9
Aqoxy5G01433 Aquilegia oxysepala HOM05D007560 ORTHO05D005947 3.1e-11 73.6 151 34.4
Lj4A614G14 Lonicera japonica HOM05D007560 ORTHO05D005947 3.1e-11 73.6 83 48.2
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.1e-11 73.6 126 32.5
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.1e-11 73.2 314 22.9
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 5.3e-11 72.8 195 29.2
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.3e-11 72.8 283 24.7
PSO384G1299 Papaver somniferum HOM05D008691 ORTHO05D005947 7.0e-11 72.4 196 29.6
COL.COLO4_10475 Corchorus olitorius HOM05D023542 ORTHO05D005947 2.0e-10 70.9 219 26.5
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 4.5e-10 69.7 168 28.6
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 4.5e-10 69.7 79 40.5
PSO339G4880 Papaver somniferum HOM05D008691 ORTHO05D005947 4.5e-10 69.7 227 30.8
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.2e-09 67.4 95 34.7
Sabra02G0170100 Salix brachista HOM05D000007 ORTHO05D000521 2.2e-09 67.4 242 25.2
Solyc01g102320.2 Solanum lycopersicum HOM05D015457 ORTHO05D020327 5.0e-09 66.2 181 26.5
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.0e-09 66.2 132 29.5
Actinidia01716 Actinidia chinensis HOM05D007560 ORTHO05D005947 1.5e-08 64.7 55 56.4
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 1.5e-08 64.7 259 27.0
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 2.5e-08 63.9 55 56.4
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.2e-08 63.5 125 32.0
Lj5P358T14 Lonicera japonica HOM05D007560 ORTHO05D005947 5.5e-08 62.8 68 48.5
Thecc.01G188100 Theobroma cacao HOM05D000007 ORTHO05D000521 5.5e-08 62.8 220 23.6
Lj5A667T12 Lonicera japonica HOM05D007560 ORTHO05D005947 7.2e-08 62.4 72 38.9
PSO782G1951 Papaver somniferum HOM05D008691 ORTHO05D005947 7.2e-08 62.4 216 26.9
Lju967A0T15 Lonicera japonica HOM05D007560 ORTHO05D005947 9.4e-08 62.0 131 30.5
PSO170G3231 Papaver somniferum HOM05D008691 ORTHO05D005947 9.4e-08 62.0 223 26.9
RcHm_v2.0_Chr4g0420091 Rosa chinensis HOM05D000007 ORTHO05D000521 9.4e-08 62.0 293 25.6
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 1.6e-07 61.2 116 28.4
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.6e-07 61.2 211 28.0
Nitab4.5_0021475g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.1e-07 60.8 104 28.8
HanXRQChr08g0209381 Helianthus annuus HOM05D000007 ORTHO05D000521 3.6e-07 60.1 91 31.9
PSO063G7584 Papaver somniferum HOM05D008691 ORTHO05D005947 3.6e-07 60.1 225 25.8
Lalb_Chr15g0087251 Lupinus albus HOM05D000007 ORTHO05D000017 4.7e-07 59.7 123 30.9
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 6.1e-07 59.3 123 30.1
PSO170G2572 Papaver somniferum HOM05D008691 ORTHO05D005947 6.1e-07 59.3 227 25.6
PSO210G3980 Papaver somniferum HOM05D000007 ORTHO05D000676 6.1e-07 59.3 55 52.7
Potri.002G223000 Populus trichocarpa HOM05D000007 ORTHO05D000521 6.1e-07 59.3 238 23.5
PSO170G5296 Papaver somniferum HOM05D008691 ORTHO05D005947 1.0e-06 58.5 208 27.9
PSO173G0057 Papaver somniferum HOM05D000007 ORTHO05D000676 1.0e-06 58.5 222 25.7
PSO170G2084 Papaver somniferum HOM05D008691 ORTHO05D005947 1.4e-06 58.2 223 24.7
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.4e-06 58.2 66 45.5
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-06 58.2 123 28.5
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.3e-06 57.4 130 27.7
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.0e-06 57.0 161 24.8
Nitab4.5_0013904g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.0e-06 57.0 268 28.0
Oeu030025.1 Olea europaea HOM05D000007 ORTHO05D000521 3.0e-06 57.0 60 48.3
PSO541G3996 Papaver somniferum HOM05D000007 ORTHO05D000676 3.0e-06 57.0 53 47.2
HanXRQChr00c0237g0572781 Helianthus annuus HOM05D000007 ORTHO05D000521 4.0e-06 56.6 77 32.5
HanXRQChr11g0327481 Helianthus annuus HOM05D000007 ORTHO05D000676 4.0e-06 56.6 77 32.5
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 4.0e-06 56.6 165 26.1
HanXRQChr03g0074881 Helianthus annuus HOM05D000007 ORTHO05D000521 5.2e-06 56.2 77 32.5
Lsat_1_v5_gn_9_104220 Lactuca sativa HOM05D000007 ORTHO05D000521 5.2e-06 56.2 84 35.7
Lj1g0007805 Lotus japonicus HOM05D000007 ORTHO05D000039 6.8e-06 55.8 123 30.9
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 8.8e-06 55.5 125 27.2
PSO339G6675 Papaver somniferum HOM05D000007 ORTHO05D000676 8.8e-06 55.5 271 22.9
QL05p069405 Quercus lobata HOM05D000007 ORTHO05D000017 8.8e-06 55.5 145 25.5
Rhsim03G0071600 Rhododendron simsii HOM05D019855 ORTHO05D018548 8.8e-06 55.5 206 26.2
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 8.8e-06 55.5 41 58.5


User provided reference genes

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