Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 9.5e-225 783.1 372 100.0
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 5.8e-73 278.9 373 45.8
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 3.8e-72 276.2 363 46.3
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 3.7e-19 100.1 313 29.1
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 8.2e-19 99.0 319 27.6
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.1e-18 95.5 364 29.7
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.1e-18 95.5 350 26.0
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 3.5e-17 93.6 305 29.2
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.9e-17 92.8 367 25.9
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 7.7e-17 92.4 364 28.8
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 1.3e-16 91.7 306 28.8
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 4.2e-15 86.7 215 30.2
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.5e-15 86.3 359 24.8
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.5e-15 86.3 359 25.1
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 7.2e-15 85.9 272 30.1
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 9.4e-15 85.5 247 30.8
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.4e-15 85.5 359 25.1
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.4e-15 85.5 359 25.1
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.4e-15 85.5 359 25.1
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.1e-14 84.3 299 28.1
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 6.1e-14 82.8 308 28.2
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.0e-14 82.4 360 24.7
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-13 81.6 306 27.1
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 5.2e-13 79.7 323 28.5
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 6.7e-13 79.3 297 27.9
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 2.6e-12 77.4 314 28.0
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 4.4e-12 76.6 319 25.7
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 7.5e-12 75.9 296 28.4
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 7.5e-12 75.9 325 27.7
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.7e-11 74.7 218 28.4
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 2.2e-11 74.3 281 29.2
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 2.2e-11 74.3 305 28.9
RhsimUnG0035000 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.8e-11 73.9 349 27.5
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.8e-11 73.2 301 25.6
Dinv35655 Davidia involucrata HOM05D013363 ORTHO05D015094 6.3e-11 72.8 326 29.1
Dinv35657 Davidia involucrata HOM05D013363 ORTHO05D015094 6.3e-11 72.8 304 28.9
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 2.4e-10 70.9 183 32.8
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 5.3e-10 69.7 226 31.0
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.0e-10 69.3 297 26.3
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 9.1e-10 68.9 281 28.8
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 1.2e-09 68.6 281 28.8
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 1.6e-09 68.2 200 28.0
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 2.0e-09 67.8 294 26.5
DCAR_018731 Daucus carota HOM05D029922 ORTHO05D013046 2.0e-09 67.8 295 25.4
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.7e-09 67.4 181 32.0
AL7G34170 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.7e-09 67.4 169 30.2
AL7G11730 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.5e-09 67.0 104 41.3
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 3.5e-09 67.0 137 35.0
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 4.5e-09 66.6 316 26.6
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 5.9e-09 66.2 285 25.6
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 7.7e-09 65.9 291 26.5
Thhalv10004132m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.0e-08 65.5 102 39.2
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.0e-08 65.5 293 27.0
Thhalv10005635m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.3e-08 65.1 138 32.6
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.7e-08 64.7 271 25.8
Carub.0008s0634 Capsella rubella HOM05D000249 ORTHO05D000206 2.9e-08 63.9 104 41.3
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 2.9e-08 63.9 237 29.1
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 1.1e-07 62.0 179 34.6
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.5e-07 61.6 222 25.2
Thhalv10027538m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.5e-07 61.6 104 40.4
Rhsim10G0137100 Rhododendron simsii HOM05D000374 ORTHO05D013046 1.5e-07 61.6 297 25.3
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.5e-07 61.6 273 27.1
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-07 60.8 266 25.9
Carub.0003s0535 Capsella rubella HOM05D000249 ORTHO05D014429 3.2e-07 60.5 154 32.5
CiPaw.03G134300 Carya illinoinensis HOM05D000249 ORTHO05D000206 3.2e-07 60.5 105 40.0
Aqoxy6G00478 Aquilegia oxysepala HOM05D000249 ORTHO05D000206 4.2e-07 60.1 104 38.5
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.2e-07 60.1 205 30.2
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-07 60.1 227 28.2
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 4.2e-07 60.1 268 26.5
AL7G12790 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.5e-07 59.7 174 29.9
Carub.0001s4064 Capsella rubella HOM05D000249 ORTHO05D000206 5.5e-07 59.7 116 35.3
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 9.4e-07 58.9 243 28.4
Thhalv10025580m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 9.4e-07 58.9 162 32.1
AL7G11960 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.2e-06 58.5 132 34.8
AL7G12140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.2e-06 58.5 101 37.6
Carub.0006s0178 Capsella rubella HOM05D000249 ORTHO05D000206 1.2e-06 58.5 112 38.4
AL7G12760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.6e-06 58.2 102 37.3
C03p37710 Brassica napus HOM05D000249 ORTHO05D000206 1.6e-06 58.2 148 29.7
BolC3t16060H Brassica oleracea HOM05D000249 ORTHO05D000206 1.6e-06 58.2 148 29.7
BraA08t34999Z Brassica rapa HOM05D000249 ORTHO05D000206 1.6e-06 58.2 104 39.4
Thhalv10005584m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.6e-06 58.2 128 32.8
BcaNung00910 Brassica carinata HOM05D000249 ORTHO05D000206 2.1e-06 57.8 116 37.1
BcaNung01786 Brassica carinata HOM05D000249 ORTHO05D000206 2.1e-06 57.8 172 27.9
C01p00900 Brassica napus HOM05D000249 ORTHO05D000206 2.1e-06 57.8 116 37.1
C07p60270 Brassica napus HOM05D000249 ORTHO05D000206 2.1e-06 57.8 127 32.3
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 2.1e-06 57.8 116 37.1
BolC7t46468H Brassica oleracea HOM05D000249 ORTHO05D000206 2.1e-06 57.8 127 32.3
CARHR225340 Cardamine hirsuta HOM05D000249 ORTHO05D000206 2.1e-06 57.8 173 31.2
AL7G32560 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.7e-06 57.4 130 34.6
BcaC01g06741 Brassica carinata HOM05D000249 ORTHO05D000206 2.7e-06 57.4 148 29.1
BcaC01g06742 Brassica carinata HOM05D000249 ORTHO05D000206 2.7e-06 57.4 148 29.1
BcaC01g06743 Brassica carinata HOM05D000249 ORTHO05D000206 2.7e-06 57.4 148 29.1
CAN.G767.7 Capsicum annuum HOM05D000249 ORTHO05D000206 2.7e-06 57.4 103 39.8
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 2.7e-06 57.4 219 28.3
Dinv35802 Davidia involucrata HOM05D013363 ORTHO05D015094 2.7e-06 57.4 107 34.6
Migut.H02437 Erythranthe guttata HOM05D000249 ORTHO05D000206 2.7e-06 57.4 278 26.3
Thhalv10025324m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.7e-06 57.4 118 35.6
A08p23270 Brassica napus HOM05D000249 ORTHO05D000206 3.6e-06 57.0 186 28.5
Carub.0007s0183 Capsella rubella HOM05D000249 ORTHO05D000206 3.6e-06 57.0 129 34.9
Carub.0011s0005 Capsella rubella HOM05D000249 ORTHO05D000206 3.6e-06 57.0 104 38.5
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 3.6e-06 57.0 103 39.8
Dinv35834 Davidia involucrata HOM05D013363 ORTHO05D015094 3.6e-06 57.0 107 34.6
PGSC0003DMG400016578 Solanum tuberosum HOM05D000249 ORTHO05D000206 3.6e-06 57.0 118 37.3
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.7e-06 56.6 227 28.2
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 4.7e-06 56.6 212 26.4
A01p00630 Brassica napus HOM05D000249 ORTHO05D000206 6.1e-06 56.2 121 32.2
Carub.0008s0881 Capsella rubella HOM05D000249 ORTHO05D000206 6.1e-06 56.2 114 31.6
Nitab4.5_0000904g0030 Nicotiana tabacum HOM05D000249 ORTHO05D000206 6.1e-06 56.2 122 36.9
AL6G12280 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.0e-06 55.8 125 33.6
AL6G12300 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.0e-06 55.8 99 34.3
C07p60900 Brassica napus HOM05D000249 ORTHO05D000206 8.0e-06 55.8 62 48.4
BraA01t00071Z Brassica rapa HOM05D000249 ORTHO05D000206 8.0e-06 55.8 121 32.2
BraA08t34282Z Brassica rapa HOM05D000249 ORTHO05D000206 8.0e-06 55.8 169 28.4
COL.COLO4_09953 Corchorus olitorius HOM05D017380 ORTHO05D019049 8.0e-06 55.8 178 26.4


User provided reference genes

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