Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008710 Camellia sinensis var. sinensis HOM05D001182 ORTHO05D008051 3.4e-130 468.4 248 100.0
CSS0017219 Camellia sinensis var. sinensis HOM05D001182 ORTHO05D008051 1.4e-62 243.8 216 66.7
vmacro01766 Vaccinium macrocarpon HOM05D001182 ORTHO05D008051 2.6e-53 213.0 203 60.1
Actinidia00212 Actinidia chinensis HOM05D001182 ORTHO05D008051 1.3e-52 210.7 216 59.3
Rhsim11G0130000 Rhododendron simsii HOM05D001182 ORTHO05D008051 6.4e-52 208.4 201 60.7
Dinv19358 Davidia involucrata HOM05D001182 ORTHO05D008051 3.0e-49 199.5 214 54.7
Dinv24265 Davidia involucrata HOM05D001182 ORTHO05D008051 1.1e-48 197.6 218 52.8
Hma1.2p1_0557F.1_g178390 Hydrangea macrophylla HOM05D001182 ORTHO05D008051 3.6e-47 192.6 204 53.4
CiPaw.06G148200 Carya illinoinensis HOM05D001182 ORTHO05D008051 1.1e-46 191.0 224 51.8
QL11p000326 Quercus lobata HOM05D001182 ORTHO05D008051 1.5e-45 187.2 217 50.2
Oeu008885.2 Olea europaea HOM05D001182 ORTHO05D008051 3.4e-45 186.0 222 50.0
Lj9A307T42 Lonicera japonica HOM05D001182 ORTHO05D008051 5.8e-45 185.3 212 49.1
Nitab4.5_0002245g0160 Nicotiana tabacum HOM05D001182 ORTHO05D008051 9.9e-45 184.5 208 51.4
Atru.chr6.839_Atru.chr6.840 Acer truncatum HOM05D001182 ORTHO05D008051 1.7e-44 183.7 206 51.0
COL.COLO4_17879 Corchorus olitorius HOM05D001182 ORTHO05D008051 6.4e-44 181.8 200 52.0
Thecc.02G039700 Theobroma cacao HOM05D001182 ORTHO05D008051 2.4e-43 179.9 198 53.0
Ciclev10000484m.g Citrus clementina HOM05D001182 ORTHO05D008051 3.2e-43 179.5 201 51.2
Haze_01651 Corylus avellana HOM05D001182 ORTHO05D008051 9.3e-43 177.9 207 51.2
GSVIVG01022994001 Vitis vinifera HOM05D001182 ORTHO05D008051 9.3e-43 177.9 217 48.4
CAN.G1577.8 Capsicum annuum HOM05D001182 ORTHO05D008051 1.2e-42 177.6 209 50.2
Migut.N01040 Erythranthe guttata HOM05D001182 ORTHO05D008051 4.6e-42 175.6 215 49.8
Cc02_g22390 Coffea canephora HOM05D001182 ORTHO05D008051 7.9e-42 174.9 218 49.1
PGR042G0576 Punica granatum HOM05D001182 ORTHO05D008051 7.9e-42 174.9 218 49.1
Nn1g08676 Nelumbo nucifera HOM05D001182 ORTHO05D008051 1.0e-41 174.5 225 44.9
Solyc01g104300.3 Solanum lycopersicum HOM05D001182 ORTHO05D008051 1.0e-41 174.5 209 49.8
Sopen01g046740 Solanum pennellii HOM05D001182 ORTHO05D008051 1.0e-41 174.5 209 49.8
Manes.07G014700 Manihot esculenta HOM05D001182 ORTHO05D008051 1.8e-41 173.7 204 50.0
Sc21g0000760 Simmondsia chinensis HOM05D001182 ORTHO05D008051 2.3e-41 173.3 202 50.0
Cpa.g.sc113.70 Carica papaya HOM05D001182 ORTHO05D008051 3.9e-41 172.6 203 48.8
TAR628G0505 Trochodendron aralioides HOM05D001182 ORTHO05D008051 5.1e-41 172.2 193 52.3
DCAR_013991 Daucus carota HOM05D001182 ORTHO05D008051 8.7e-41 171.4 193 49.2
Duzib132G0224 Durio zibethinus HOM05D001182 ORTHO05D008051 8.7e-41 171.4 198 50.5
Prupe.1G566800 Prunus persica HOM05D001182 ORTHO05D008051 1.1e-40 171.0 225 46.7
MD08G1227800 Malus domestica HOM05D001182 ORTHO05D008051 1.9e-40 170.2 225 45.8
EL10Ac9g22713 Beta vulgaris HOM05D001182 ORTHO05D008051 2.5e-40 169.9 200 47.5
arahy.Tifrunner.gnm1.ann1.SMR6SK Arachis hypogaea HOM05D001182 ORTHO05D008051 3.3e-40 169.5 217 47.0
arahy.Tifrunner.gnm1.ann1.UK23IF Arachis hypogaea HOM05D001182 ORTHO05D008051 3.3e-40 169.5 217 47.0
MSTRG.5232 Avicennia marina HOM05D001182 ORTHO05D008051 3.3e-40 169.5 214 46.3
Gohir.A03G211100 Gossypium hirsutum HOM05D001182 ORTHO05D008051 1.3e-39 167.5 201 48.8
Gohir.D02G232700 Gossypium hirsutum HOM05D001182 ORTHO05D008051 1.6e-39 167.2 201 48.3
Gorai.005G260500 Gossypium raimondii HOM05D001182 ORTHO05D008051 1.6e-39 167.2 201 48.3
HanXRQChr03g0066821 Helianthus annuus HOM05D001182 ORTHO05D008051 1.6e-39 167.2 207 46.9
TWI14G1019 Tripterygium wilfordii HOM05D001182 ORTHO05D008051 2.1e-39 166.8 222 45.0
ClCG09G013930 Citrullus lanatus HOM05D001182 ORTHO05D008051 3.7e-39 166.0 209 47.4
RcHm_v2.0_Chr7g0222711 Rosa chinensis HOM05D001182 ORTHO05D008051 4.8e-39 165.6 217 45.2
CsaV3_1G044980 Cucumis sativus L. HOM05D001182 ORTHO05D008051 6.2e-39 165.2 209 48.3
MD15G1421600 Malus domestica HOM05D001182 ORTHO05D008051 6.2e-39 165.2 204 48.5
Sed0008850 Sechium edule HOM05D001182 ORTHO05D008051 6.2e-39 165.2 208 47.1
Glyma.08G185700 Glycine max HOM05D001182 ORTHO05D008051 8.1e-39 164.9 217 45.2
SGA_v2.0_scaffold145G36071 Striga asiatica HOM05D001182 ORTHO05D008051 8.1e-39 164.9 191 48.7
Ca_00081_v3 Cicer arietinum L. HOM05D001182 ORTHO05D008051 1.1e-38 164.5 217 44.7
ECA234G2900 Erigeron canadensis HOM05D001182 ORTHO05D008051 1.1e-38 164.5 192 49.0
Potri.001G210200 Populus trichocarpa HOM05D001182 ORTHO05D008051 1.1e-38 164.5 207 46.9
MELO3C010089.2 Cucumis melo HOM05D001182 ORTHO05D008051 1.4e-38 164.1 209 47.4
FvH4_5g29650 Fragaria vesca HOM05D001182 ORTHO05D008051 1.8e-38 163.7 217 45.2
MBI09_g06383_MAGBIO Magnolia biondii HOM05D001182 ORTHO05D008051 1.8e-38 163.7 227 45.4
PSO170G3364 Papaver somniferum HOM05D001182 ORTHO05D008051 1.8e-38 163.7 202 48.5
Aqoxy5G02433 Aquilegia oxysepala HOM05D001182 ORTHO05D008051 2.4e-38 163.3 224 44.2
HanXRQChr16g0513941 Helianthus annuus HOM05D001182 ORTHO05D008051 2.4e-38 163.3 211 45.0
TPR.G2100 Trifolium pratense HOM05D001182 ORTHO05D008051 3.1e-38 162.9 232 44.0
Lsat_1_v5_gn_9_118280 Lactuca sativa HOM05D001182 ORTHO05D008051 4.0e-38 162.5 207 46.4
Nn5g28124 Nelumbo nucifera HOM05D001182 ORTHO05D008051 4.0e-38 162.5 211 45.5
Gorai.002G209500 Gossypium raimondii HOM05D001182 ORTHO05D008051 5.3e-38 162.2 203 46.8
Eucgr.G00608 Eucalyptus grandis HOM05D001182 ORTHO05D008051 6.9e-38 161.8 193 48.7
FAN04G2731 Fragaria x ananassa HOM05D001182 ORTHO05D008051 6.9e-38 161.8 217 44.7
Gohir.A01G177900 Gossypium hirsutum HOM05D001182 ORTHO05D008051 9.0e-38 161.4 200 48.0
Gohir.D01G168700 Gossypium hirsutum HOM05D001182 ORTHO05D008051 9.0e-38 161.4 203 46.3
Os01g0869000 Oryza sativa ssp. japonica HOM05D001182 ORTHO05D008051 9.0e-38 161.4 231 45.9
VMungo0540G0659 Vigna mungo HOM05D001182 ORTHO05D008051 9.0e-38 161.4 217 44.2
PSO017G4704 Papaver somniferum HOM05D001182 ORTHO05D008051 1.2e-37 161.0 202 48.0
FAN08G2833 Fragaria x ananassa HOM05D001182 ORTHO05D008051 1.5e-37 160.6 207 45.9
ECA240G2723 Erigeron canadensis HOM05D001182 ORTHO05D008051 3.4e-37 159.5 213 43.7
Lj6g0002068 Lotus japonicus HOM05D001182 ORTHO05D008051 3.4e-37 159.5 218 45.9
Medtr2g007330 Medicago truncatula HOM05D001182 ORTHO05D008051 3.4e-37 159.5 232 43.1
AUR62015048 Chenopodium quinoa HOM05D001182 ORTHO05D008051 4.5e-37 159.1 192 47.4
Psat1g224520 Pisum sativum HOM05D001182 ORTHO05D008051 4.5e-37 159.1 229 43.7
unitig_52.g17435 Utricularia gibba HOM05D001182 ORTHO05D008051 4.5e-37 159.1 222 43.7
SalBow6G4578 Salvia bowleyana HOM05D001182 ORTHO05D008051 5.8e-37 158.7 192 50.0
SalBow6G5030 Salvia bowleyana HOM05D001182 ORTHO05D008051 5.8e-37 158.7 192 50.0
AUR62017507 Chenopodium quinoa HOM05D001182 ORTHO05D008051 7.6e-37 158.3 192 46.9
CANSAT54G1880 Cannabis sativa HOM05D001182 ORTHO05D008051 1.3e-36 157.5 217 43.8
Phvul.006G214050 Phaseolus vulgaris HOM05D001182 ORTHO05D008051 1.3e-36 157.5 217 43.3
Lsat_1_v5_gn_5_109401 Lactuca sativa HOM05D001182 ORTHO05D008051 2.2e-36 156.8 188 50.0
Ah.01g002710 Amaranthus hybridus HOM05D001182 ORTHO05D008051 4.9e-36 155.6 202 45.0
THA.LOC104800080 Tarenaya hassleriana HOM05D001182 ORTHO05D008051 4.9e-36 155.6 204 45.1
Glyma.15G047100 Glycine max HOM05D001182 ORTHO05D008051 4.2e-35 152.5 248 41.5
Aa31LG4G9270 Aethionema arabicum HOM05D001182 ORTHO05D008051 5.5e-35 152.1 198 44.4
ATR0584G139 Amborella trichopoda HOM05D001182 ORTHO05D008051 2.7e-34 149.8 215 43.3
HPP92_001083 Vanilla planifolia HOM05D001182 ORTHO05D008051 6.0e-34 148.7 229 42.4
Nitab4.5_0011195g0030 Nicotiana tabacum HOM05D001182 ORTHO05D008051 1.0e-33 147.9 210 43.8
BcaC08g46560 Brassica carinata HOM05D001182 ORTHO05D008051 3.9e-33 146.0 190 45.3
C06p45360 Brassica napus HOM05D001182 ORTHO05D008051 3.9e-33 146.0 190 45.3
BcaB03g14882 Brassica carinata HOM05D001182 ORTHO05D008051 5.1e-33 145.6 198 42.9
A07p37600 Brassica napus HOM05D001182 ORTHO05D008051 5.1e-33 145.6 190 45.3
BraA07t31321Z Brassica rapa HOM05D001182 ORTHO05D008051 5.1e-33 145.6 190 45.3
Carub.0002s1812 Capsella rubella HOM05D001182 ORTHO05D008051 6.7e-33 145.2 195 43.6
AL2G30850 Arabidopsis lyrata HOM05D001182 ORTHO05D008051 8.7e-33 144.8 195 43.1
BolC6t39592H Brassica oleracea HOM05D001182 ORTHO05D008051 1.5e-32 144.1 190 44.7
Thhalv10018126m.g Eutrema salsugineum HOM05D001182 ORTHO05D008051 2.5e-32 143.3 198 42.4
Lalb_Chr15g0090641 Lupinus albus HOM05D001182 ORTHO05D008051 3.3e-32 142.9 201 41.8
AT1G71240 Arabidopsis thaliana HOM05D001182 ORTHO05D008051 7.4e-32 141.7 205 41.5
Peaxi162Scf00011g00358 Petunia axillaris HOM05D001182 ORTHO05D008051 3.7e-31 139.4 201 42.8
Sp5g26440 Schrenkiella parvula HOM05D001182 ORTHO05D008051 3.7e-31 139.4 190 43.2
Actinidia39048 Actinidia chinensis HOM05D001182 ORTHO05D008051 6.2e-31 138.7 203 44.8
Mapoly0004s0069 Marchantia polymorpha HOM05D001182 ORTHO05D008051 2.2e-20 103.6 190 34.2
Hund01588 Selenicereus undatus HOM05D001182 ORTHO05D008051 1.4e-19 100.9 65 73.8
AagrBONN_evm.TU.Sc2ySwM_117.531 Anthoceros agrestis HOM05D001182 ORTHO05D008051 5.5e-19 99.0 205 32.2
SMO117G0194 Selaginella moellendorffii HOM05D001182 ORTHO05D008051 1.2e-18 97.8 175 37.1
TAR665G0001 Trochodendron aralioides HOM05D001182 ORTHO05D008051 3.6e-18 96.3 74 67.6
Pp3c14_16340 Physcomitrium patens HOM05D001182 ORTHO05D008051 6.7e-17 92.0 202 31.2
Pp3c17_20110 Physcomitrium patens HOM05D001182 ORTHO05D008051 1.5e-16 90.9 200 31.5
Cfa005531 Carpinus fangiana HOM05D001182 ORTHO05D008051 1.3e-15 87.8 58 75.9
AUR62017755 Chenopodium quinoa HOM05D001182 ORTHO05D003133 2.0e-08 63.9 206 23.8
AUR62018247 Chenopodium quinoa HOM05D001182 ORTHO05D003133 3.3e-08 63.2 198 24.2
EL10Ac9g23019 Beta vulgaris HOM05D001182 ORTHO05D003133 4.8e-07 59.3 208 23.1
AagrBONN_evm.TU.Sc2ySwM_362.2081 Anthoceros agrestis HOM05D001182 ORTHO05D003133 2.4e-06 57.0 180 26.7
Thecc.02G152300 Theobroma cacao HOM05D001182 ORTHO05D003133 3.1e-06 56.6 167 25.7
Zm00001eb185620 Zea mays HOM05D001182 ORTHO05D003133 4.1e-06 56.2 188 22.9
COL.COLO4_33140 Corchorus olitorius HOM05D001182 ORTHO05D003133 7.0e-06 55.5 188 25.0
Duzib132G0513 Durio zibethinus HOM05D001182 ORTHO05D003133 9.1e-06 55.1 179 24.0
MBI06_g22567_MAGBIO Magnolia biondii HOM05D001182 ORTHO05D003133 9.1e-06 55.1 179 22.9


User provided reference genes

Program Settings