Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008685 Camellia sinensis var. sinensis HOM05D007422 ORTHO05D009333 3.0e-69 265.0 130 100.0
Dinv18494 Davidia involucrata HOM05D007422 ORTHO05D009333 1.2e-30 136.7 88 79.5
vmacro18659 Vaccinium macrocarpon HOM05D007422 ORTHO05D009333 1.8e-29 132.9 89 80.9
Manes.12G151400 Manihot esculenta HOM05D007422 ORTHO05D009333 1.3e-27 126.7 88 70.5
Manes.12G151600 Manihot esculenta HOM05D007422 ORTHO05D009333 1.3e-27 126.7 88 70.5
RcHm_v2.0_Chr2g0118261 Rosa chinensis HOM05D007422 ORTHO05D009333 1.7e-27 126.3 88 73.9
Potri.005G056500 Populus trichocarpa HOM05D007422 ORTHO05D009333 8.3e-27 124.0 88 72.7
Cc07_g17580 Coffea canephora HOM05D007422 ORTHO05D009333 1.9e-26 122.9 88 73.9
ECA233G2273 Erigeron canadensis HOM05D002719 ORTHO05D002938 1.9e-26 122.9 88 70.5
Prupe.6G165000 Prunus persica HOM05D007422 ORTHO05D009333 7.1e-26 120.9 90 71.1
MD05G1015900 Malus domestica HOM05D007422 ORTHO05D009333 2.1e-25 119.4 91 69.2
PGSC0003DMG400018421 Solanum tuberosum HOM05D007422 ORTHO05D009333 2.1e-25 119.4 88 70.5
Oeu039761.1 Olea europaea HOM05D007422 ORTHO05D009333 3.5e-25 118.6 88 70.5
Nitab4.5_0006443g0040 Nicotiana tabacum HOM05D007422 ORTHO05D009333 4.6e-25 118.2 88 69.3
Lsat_1_v5_gn_8_142161 Lactuca sativa HOM05D007422 ORTHO05D009333 6.0e-25 117.9 88 68.2
Thecc.01G123800 Theobroma cacao HOM05D007422 ORTHO05D009333 7.8e-25 117.5 88 69.3
HanXRQChr17g0559811 Helianthus annuus HOM05D007422 ORTHO05D009333 1.0e-24 117.1 88 67.0
TWI31G1366 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 1.0e-24 117.1 88 65.9
Medtr3g095670 Medicago truncatula HOM05D007422 ORTHO05D009333 1.3e-24 116.7 88 69.3
Duzib264G1170 Durio zibethinus HOM05D007422 ORTHO05D009333 3.0e-24 115.5 88 67.0
Migut.H01100 Erythranthe guttata HOM05D007422 ORTHO05D009333 3.9e-24 115.2 88 68.2
PGR102G2924 Punica granatum HOM05D007422 ORTHO05D009333 5.1e-24 114.8 99 64.6
PSO170G3514 Papaver somniferum HOM05D007422 ORTHO05D009333 6.6e-24 114.4 87 64.4
TWI75G1659 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 6.6e-24 114.4 88 64.8
COL.COLO4_21895 Corchorus olitorius HOM05D007422 ORTHO05D009333 8.6e-24 114.0 88 67.0
Cpa.g.sc42.105 Carica papaya HOM05D007422 ORTHO05D009333 1.9e-23 112.8 88 65.9
CiPaw.04G085200 Carya illinoinensis HOM05D007422 ORTHO05D009333 1.9e-23 112.8 89 67.4
TAR628G0864 Trochodendron aralioides HOM05D007422 ORTHO05D009333 2.5e-23 112.5 88 65.9
Gohir.D04G029700 Gossypium hirsutum HOM05D007422 ORTHO05D009333 3.3e-23 112.1 88 64.8
Gorai.012G032800 Gossypium raimondii HOM05D007422 ORTHO05D009333 3.3e-23 112.1 88 64.8
Sp1g36060 Schrenkiella parvula HOM05D007422 ORTHO05D009333 4.3e-23 111.7 88 65.9
MSTRG.2680 Avicennia marina HOM05D007422 ORTHO05D009333 5.6e-23 111.3 88 65.9
Hund04464 Selenicereus undatus HOM05D007422 ORTHO05D009333 5.6e-23 111.3 88 62.5
Ciclev10026766m.g Citrus clementina HOM05D007422 ORTHO05D009333 7.3e-23 110.9 88 64.8
Atru.chr4.503 Acer truncatum HOM05D007422 ORTHO05D009333 9.5e-23 110.5 90 65.6
Glyma.04G215300 Glycine max HOM05D007422 ORTHO05D009333 9.5e-23 110.5 88 64.8
Sc03g0005110 Simmondsia chinensis HOM05D007422 ORTHO05D009333 9.5e-23 110.5 89 60.7
ClCG02G000660 Citrullus lanatus HOM05D007422 ORTHO05D009333 1.2e-22 110.2 88 68.2
Psat5g063240 Pisum sativum HOM05D007422 ORTHO05D009333 1.2e-22 110.2 88 64.8
CAN.G900.53 Capsicum annuum HOM05D007422 ORTHO05D009333 1.6e-22 109.8 88 65.9
CARHR039170 Cardamine hirsuta HOM05D007422 ORTHO05D009333 1.6e-22 109.8 88 67.0
Gohir.A05G386900 Gossypium hirsutum HOM05D007422 ORTHO05D009333 1.6e-22 109.8 88 62.5
MELO3C023262.2 Cucumis melo HOM05D007422 ORTHO05D009333 2.1e-22 109.4 88 67.0
arahy.Tifrunner.gnm1.ann1.DL1AJH Arachis hypogaea HOM05D007422 ORTHO05D009333 2.8e-22 109.0 88 62.5
arahy.Tifrunner.gnm1.ann1.PIK6SY Arachis hypogaea HOM05D007422 ORTHO05D009333 3.6e-22 108.6 88 62.5
CDE08G0547 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 3.6e-22 108.6 78 66.7
Lalb_Chr08g0238531 Lupinus albus HOM05D007422 ORTHO05D009333 3.6e-22 108.6 88 63.6
TPR.G18719 Trifolium pratense HOM05D007422 ORTHO05D009333 4.7e-22 108.2 88 64.8
CANSAT01G0526 Cannabis sativa HOM05D007422 ORTHO05D009333 6.2e-22 107.8 94 61.7
Solyc03g078350.3 Solanum lycopersicum HOM05D007422 ORTHO05D009333 6.2e-22 107.8 88 65.9
Sopen03g021130 Solanum pennellii HOM05D007422 ORTHO05D009333 6.2e-22 107.8 88 65.9
SGA_v2.0_scaffold137G35131 Striga asiatica HOM05D007422 ORTHO05D009333 8.1e-22 107.5 88 63.6
Thhalv10011860m.g Eutrema salsugineum HOM05D007422 ORTHO05D009333 1.1e-21 107.1 88 65.9
A05p20740 Brassica napus HOM05D007422 ORTHO05D009333 1.4e-21 106.7 88 63.6
BraA05t20982Z Brassica rapa HOM05D007422 ORTHO05D009333 1.4e-21 106.7 88 63.6
THA.LOC104821861 Tarenaya hassleriana HOM05D007422 ORTHO05D009333 1.4e-21 106.7 88 62.5
AT1G49170 Arabidopsis thaliana HOM05D007422 ORTHO05D009333 1.8e-21 106.3 88 63.6
Lj1g0018544 Lotus japonicus HOM05D007422 ORTHO05D009333 1.8e-21 106.3 91 64.8
Sabra05G0048800 Salix brachista HOM05D007422 ORTHO05D009333 1.8e-21 106.3 97 60.8
Haze_25151 Corylus avellana HOM05D007422 ORTHO05D009333 2.4e-21 105.9 90 62.2
Carub.0001s3836 Capsella rubella HOM05D007422 ORTHO05D009333 3.1e-21 105.5 88 65.9
Cfa002851 Carpinus fangiana HOM05D007422 ORTHO05D009333 3.1e-21 105.5 91 62.6
DCAR_031485 Daucus carota HOM05D007422 ORTHO05D009333 3.1e-21 105.5 89 64.0
BcaC05g27531 Brassica carinata HOM05D007422 ORTHO05D009333 4.0e-21 105.1 88 63.6
C05p35090 Brassica napus HOM05D007422 ORTHO05D009333 4.0e-21 105.1 88 63.6
BolC5t32228H Brassica oleracea HOM05D007422 ORTHO05D009333 4.0e-21 105.1 88 63.6
Glyma.06G150900 Glycine max HOM05D007422 ORTHO05D009333 4.0e-21 105.1 88 62.5
PSO017G6029 Papaver somniferum HOM05D007422 ORTHO05D009333 4.0e-21 105.1 89 61.8
AL1G56040 Arabidopsis lyrata HOM05D007422 ORTHO05D009333 5.2e-21 104.8 88 63.6
Nn1g06132 Nelumbo nucifera HOM05D007422 ORTHO05D009333 5.2e-21 104.8 88 65.9
VMungo1309G2444 Vigna mungo HOM05D007422 ORTHO05D009333 8.9e-21 104.0 88 60.2
Phvul.009G147900 Phaseolus vulgaris HOM05D007422 ORTHO05D009333 1.2e-20 103.6 88 59.1
Aa31LG10G5060 Aethionema arabicum HOM05D007422 ORTHO05D009333 1.5e-20 103.2 90 63.3
Zm00001eb076010 Zea mays HOM05D007422 ORTHO05D009333 3.4e-20 102.1 88 60.2
Ah.02g122030 Amaranthus hybridus HOM05D007422 ORTHO05D009333 4.4e-20 101.7 88 59.1
AUR62017925 Chenopodium quinoa HOM05D007422 ORTHO05D009333 4.4e-20 101.7 88 62.5
QL06p030244 Quercus lobata HOM05D007422 ORTHO05D009333 7.6e-20 100.9 94 57.4
Aqoxy5G02143 Aquilegia oxysepala HOM05D007422 ORTHO05D009333 1.3e-19 100.1 95 58.9
Peaxi162Scf00583g00227 Petunia axillaris HOM05D007422 ORTHO05D009333 1.3e-19 100.1 88 62.5
Ca_16922_v3 Cicer arietinum L. HOM05D007422 ORTHO05D009333 3.8e-19 98.6 88 62.5
MBI17_g11164_MAGBIO Magnolia biondii HOM05D007422 ORTHO05D009333 3.8e-19 98.6 60 78.3
CDE06G1708 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 4.9e-19 98.2 77 61.0
Os04g0686300 Oryza sativa ssp. japonica HOM05D007422 ORTHO05D009333 5.4e-18 94.7 89 59.6
BcaB02g11281 Brassica carinata HOM05D007422 ORTHO05D009333 1.2e-17 93.6 93 58.1
ATR0772G041 Amborella trichopoda HOM05D007422 ORTHO05D009333 2.7e-17 92.4 88 53.4
unitig_60.g25621 Utricularia gibba HOM05D007422 ORTHO05D009333 3.5e-17 92.0 83 60.2
BcaB02g11285 Brassica carinata HOM05D007422 ORTHO05D009333 2.3e-16 89.4 117 47.0
FvH4_1g23360 Fragaria vesca HOM05D007422 ORTHO05D009333 2.3e-16 89.4 75 66.7
FAN19G2306 Fragaria x ananassa HOM05D007422 ORTHO05D009333 2.3e-16 89.4 75 66.7
SEGI_34968 Sequoiadendron giganteum HOM05D007422 ORTHO05D009333 2.3e-16 89.4 91 52.7
HPP92_006817 Vanilla planifolia HOM05D007422 ORTHO05D009333 3.0e-16 89.0 89 55.1
Prupe.6G164500 Prunus persica HOM05D007422 ORTHO05D009333 8.7e-16 87.4 76 63.2
AUR62003614 Chenopodium quinoa HOM05D007422 ORTHO05D009333 2.8e-14 82.4 76 60.5
Sed0005171 Sechium edule HOM05D007422 ORTHO05D009333 5.8e-12 74.7 74 52.7
Mapoly0054s0054 Marchantia polymorpha HOM05D007422 ORTHO05D009333 2.4e-10 69.3 58 53.4
FAN23G3068 Fragaria x ananassa HOM05D007422 ORTHO05D009333 9.3e-10 67.4 77 53.2
Pp3c13_2330 Physcomitrium patens HOM05D007422 ORTHO05D009333 1.6e-09 66.6 54 57.4
Rhsim08G0003400 Rhododendron simsii HOM05D005663 ORTHO05D007258 1.0e-08 63.9 40 77.5
GSVIVG01026559001 Vitis vinifera HOM05D007422 ORTHO05D009333 5.6e-07 58.2 33 84.8
CsaV3_2G018110 Cucumis sativus L. HOM05D007422 ORTHO05D009333 2.8e-06 55.8 35 71.4


User provided reference genes

Program Settings