Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 4.3e-286 987.3 479 100.0
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 3.1e-236 821.6 486 81.7
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 2.8e-229 798.5 452 83.6
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 3.0e-223 778.5 478 78.2
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 8.8e-215 750.4 462 77.5
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 4.3e-214 748.0 463 77.5
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 3.7e-213 745.0 464 76.1
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 9.4e-209 730.3 464 75.6
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 2.1e-208 729.2 459 76.7
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 3.6e-208 728.4 461 74.6
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.5e-206 723.0 476 72.5
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 2.6e-206 722.2 463 74.1
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 9.7e-206 720.3 475 72.4
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.7e-205 719.5 461 73.3
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 3.7e-205 718.4 461 72.7
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 3.7e-205 718.4 464 73.9
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 6.3e-205 717.6 461 73.1
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 6.3e-205 717.6 479 71.0
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 1.4e-204 716.5 460 72.8
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.8e-204 716.1 465 74.4
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.6e-203 712.2 462 74.0
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 3.5e-203 711.8 479 73.1
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 4.5e-203 711.4 461 73.3
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 5.9e-203 711.1 497 70.6
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.7e-202 709.5 464 71.8
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 3.8e-202 708.4 465 73.3
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 2.5e-201 705.7 471 72.2
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 5.5e-201 704.5 474 71.5
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 7.2e-201 704.1 471 71.5
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 9.4e-201 703.7 467 75.2
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 1.6e-200 703.0 465 72.9
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 2.7e-200 702.2 469 71.2
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 2.7e-200 702.2 468 72.6
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 3.6e-200 701.8 479 70.8
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.7e-200 701.4 470 72.3
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.1e-200 701.0 471 73.2
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.4e-199 699.9 436 76.6
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 3.0e-199 698.7 464 72.8
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 3.0e-199 698.7 474 71.7
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 3.9e-199 698.4 459 73.2
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.5e-198 696.4 463 71.7
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.0e-198 696.0 475 72.4
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 4.4e-198 694.9 460 72.8
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 6.5e-194 681.0 451 73.4
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 8.5e-194 680.6 488 68.9
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.5e-193 679.9 427 74.0
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.9e-193 679.5 462 70.6
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.8e-191 672.9 429 72.7
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 4.0e-191 671.8 427 74.0
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 2.6e-190 669.1 487 67.8
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 5.7e-190 667.9 466 67.6
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 3.7e-189 665.2 468 69.0
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 5.4e-188 661.4 436 70.6
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 5.9e-187 657.9 448 70.5
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 3.8e-186 655.2 472 68.0
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 3.8e-186 655.2 462 68.4
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 4.2e-185 651.7 439 69.7
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.2e-184 650.2 462 69.7
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.2e-184 650.2 386 78.2
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.2e-184 650.2 439 69.5
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 4.7e-184 648.3 471 67.3
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 6.1e-184 647.9 443 70.2
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 8.0e-184 647.5 439 69.0
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 8.0e-184 647.5 386 77.5
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 1.0e-183 647.1 425 72.2
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 3.0e-183 645.6 439 69.2
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 4.0e-183 645.2 444 70.9
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 8.8e-183 644.0 473 67.0
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 8.8e-183 644.0 473 67.0
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 1.2e-182 643.7 479 66.0
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.5e-182 643.3 473 66.8
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 4.4e-182 641.7 439 69.2
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.3e-181 640.2 478 66.1
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.4e-180 636.7 479 65.3
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 2.4e-180 636.0 434 70.3
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 2.4e-180 636.0 368 79.6
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 3.1e-180 635.6 470 65.1
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 3.8e-178 628.6 502 62.9
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 4.2e-177 625.2 433 68.6
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.4e-175 620.2 431 68.4
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 1.8e-175 619.8 364 78.3
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.8e-172 609.8 386 72.3
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.8e-172 609.8 384 73.4
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 3.5e-171 605.5 487 63.0
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 4.6e-171 605.1 393 72.3
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 8.6e-170 600.9 414 68.8
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 2.5e-169 599.4 465 64.3
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 3.1e-167 592.4 401 70.6
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 2.0e-163 579.7 428 66.1
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.1e-159 567.4 453 60.7
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 6.4e-157 558.1 435 61.6
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 7.1e-156 554.7 432 61.6
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 2.5e-153 546.2 334 76.3
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 2.2e-149 533.1 442 60.4
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 3.4e-142 509.2 381 63.3
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 5.8e-142 508.4 314 80.3
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 7.9e-131 471.5 484 53.3
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 7.2e-108 395.2 212 86.8
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 6.7e-98 362.1 454 43.2
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 1.7e-96 357.5 259 71.0
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 4.5e-94 349.4 389 45.8
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 3.2e-92 343.2 223 73.1
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.7e-91 340.1 263 63.5
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.0e-90 338.2 456 41.4
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 2.1e-83 313.9 319 54.2
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 7.7e-78 295.4 272 57.4
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 3.2e-68 263.5 158 75.9
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 5.9e-62 242.7 155 74.2
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-47 195.3 250 45.6
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.8e-43 180.6 128 66.4
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.3e-29 135.2 123 55.3
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.9e-28 131.3 76 78.9
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.2e-27 128.6 81 76.5
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 2.4e-26 124.4 70 80.0
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 4.0e-26 123.6 125 53.6
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 3.0e-21 107.5 130 50.0
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.8e-18 98.2 102 52.9
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 3.4e-17 94.0 79 53.2
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 4.2e-15 87.0 111 52.3


User provided reference genes

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