Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.8e-193 678.3 321 100.0
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 9.1e-184 646.7 321 95.3
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.7e-172 607.8 321 90.7
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 1.4e-131 473.4 323 69.3
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 5.3e-115 418.3 320 62.2
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 9.0e-115 417.5 321 62.9
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 1.0e-113 414.1 325 63.4
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 1.7e-113 413.3 321 64.5
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.9e-113 411.8 311 70.4
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 2.5e-112 409.5 332 61.7
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.0e-110 404.1 322 59.3
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 5.7e-109 398.3 322 59.3
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 6.3e-108 394.8 319 58.6
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 1.1e-107 394.0 320 59.4
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 9.0e-107 391.0 323 57.0
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 2.0e-106 389.8 325 56.3
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 2.0e-106 389.8 319 59.9
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 3.4e-106 389.0 324 56.2
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 4.5e-106 388.7 303 60.7
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 1.3e-105 387.1 325 57.8
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.6e-103 380.2 322 57.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 2.7e-103 379.4 322 56.8
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 3.9e-102 375.6 322 57.5
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 3.3e-101 372.5 334 55.4
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 5.7e-101 371.7 323 56.3
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 1.3e-100 370.5 319 55.8
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 8.2e-100 367.9 326 57.7
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 1.4e-99 367.1 325 56.3
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.2e-98 364.0 322 56.5
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 1.2e-98 364.0 334 53.0
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 2.0e-98 363.2 320 55.3
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.0e-97 360.9 334 52.7
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 1.7e-97 360.1 322 56.8
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 2.9e-97 359.4 320 54.4
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 8.5e-97 357.8 326 56.1
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 1.1e-96 357.5 323 53.9
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 1.1e-96 357.5 336 53.6
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 2.5e-96 356.3 323 53.9
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 3.2e-96 355.9 323 56.0
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 7.2e-96 354.8 324 54.3
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 1.0e-94 350.9 322 55.3
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 6.7e-94 348.2 328 53.4
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 6.7e-94 348.2 322 53.1
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 8.8e-94 347.8 322 55.0
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 8.8e-94 347.8 322 55.0
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 8.8e-94 347.8 331 54.1
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 3.3e-93 345.9 310 54.8
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.7e-92 343.6 285 56.8
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.5e-90 337.0 324 53.7
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 1.1e-88 330.9 330 50.9
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 1.1e-88 330.9 326 49.4
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 8.8e-86 321.2 320 51.9
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 2.6e-82 309.7 327 47.7
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 3.8e-81 305.8 326 47.5
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.9e-80 303.5 327 48.0
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 9.4e-80 301.2 327 46.8
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 2.7e-79 299.7 325 48.3
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 3.6e-79 299.3 325 48.0
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 2.0e-77 293.5 326 47.2
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 2.0e-77 293.5 326 47.2
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 7.5e-77 291.6 327 46.8
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 1.7e-76 290.4 326 46.9
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 1.7e-76 290.4 326 46.9
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 7.0e-75 285.0 323 45.5
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 2.9e-73 279.6 328 43.3
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.9e-72 276.9 316 46.2
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 5.2e-70 268.9 240 57.9
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 1.5e-61 240.7 326 42.0
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 8.6e-57 224.9 208 52.4
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 2.5e-56 223.4 315 37.8
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.9e-48 197.2 245 42.9
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 3.6e-31 139.8 141 48.2


User provided reference genes

Program Settings