Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.5e-147 523.5 261 100.0
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.6e-122 443.0 254 84.6
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.8e-121 439.5 254 85.4
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 7.6e-120 434.1 252 84.5
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.6e-117 426.4 280 76.8
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.1e-113 413.7 261 80.5
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.1e-113 412.1 261 80.1
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.7e-111 406.4 258 76.4
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 2.9e-111 405.6 263 74.1
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 2.4e-110 402.5 263 73.8
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 5.4e-110 401.4 263 74.1
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 2.1e-109 399.4 256 76.2
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 3.5e-109 398.7 258 75.2
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 4.6e-109 398.3 236 80.1
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 6.0e-109 397.9 270 72.2
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.0e-108 397.1 251 77.3
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.7e-108 396.4 257 75.5
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.3e-108 396.0 255 76.1
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 3.0e-108 395.6 267 73.8
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.5e-107 393.3 258 73.3
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.5e-107 393.3 261 72.0
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 1.5e-107 393.3 247 76.5
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.5e-107 393.3 258 74.8
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.9e-107 392.9 243 77.4
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 3.3e-107 392.1 258 76.0
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.1e-105 387.1 259 74.9
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.1e-105 387.1 243 77.0
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 9.0e-105 384.0 260 75.4
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.2e-104 383.6 258 72.9
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 2.0e-104 382.9 243 77.4
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.4e-104 382.1 245 75.5
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 2.2e-103 379.4 258 71.3
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 3.8e-103 378.6 258 72.1
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 9.3e-102 374.0 269 69.1
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 9.3e-102 374.0 244 71.3
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.6e-101 373.2 238 78.6
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.6e-101 373.2 245 71.8
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 2.7e-101 372.5 256 70.7
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.5e-101 372.1 259 71.4
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.5e-101 372.1 268 69.8
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 4.6e-101 371.7 260 71.5
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 6.0e-101 371.3 247 72.1
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 3.0e-100 369.0 255 70.6
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.5e-99 366.7 245 73.1
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 3.3e-99 365.5 251 72.1
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 4.3e-99 365.2 258 67.8
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 7.4e-99 364.4 243 72.0
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 7.4e-99 364.4 263 71.1
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 1.3e-98 363.6 263 68.4
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 1.6e-98 363.2 247 71.3
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 2.1e-98 362.8 256 70.7
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 2.1e-98 362.8 246 72.8
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 2.8e-98 362.5 255 69.4
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 2.8e-98 362.5 251 71.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 6.2e-98 361.3 263 70.0
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 8.1e-98 360.9 259 67.2
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 8.1e-98 360.9 263 71.1
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 8.1e-98 360.9 245 70.6
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 1.1e-97 360.5 245 70.6
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.1e-97 360.5 258 68.6
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.8e-97 359.8 242 69.8
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 4.0e-97 358.6 255 71.4
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 9.0e-97 357.5 255 71.4
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 9.0e-97 357.5 255 71.0
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 2.6e-96 355.9 256 68.4
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 4.5e-96 355.1 240 69.2
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 4.5e-96 355.1 240 69.2
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 4.5e-96 355.1 244 69.7
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 5.8e-96 354.8 262 64.9
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.0e-95 354.0 244 69.7
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 4.9e-95 351.7 257 66.1
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 4.9e-95 351.7 240 68.8
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 4.9e-95 351.7 240 68.8
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.4e-94 350.1 229 71.6
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 1.9e-94 349.7 264 65.5
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 2.5e-94 349.4 259 66.0
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 9.3e-94 347.4 270 65.9
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.1e-93 346.3 243 67.5
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 3.5e-93 345.5 256 65.2
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 7.9e-93 344.4 240 67.5
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.0e-92 344.0 263 63.5
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 1.8e-92 343.2 248 66.1
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 1.8e-92 343.2 239 67.8
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 1.8e-92 343.2 240 67.9
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 3.0e-92 342.4 244 66.4
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.1e-91 340.5 250 67.2
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.5e-91 340.1 247 66.0
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.9e-91 339.7 235 68.5
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 2.5e-91 339.3 260 64.6
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 4.3e-91 338.6 235 68.5
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 7.4e-91 337.8 240 66.2
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-90 337.0 221 75.1
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.3e-90 337.0 245 66.5
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 2.2e-87 326.2 246 65.4
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 7.2e-86 321.2 258 64.7
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.0e-79 300.8 250 58.0
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 6.1e-77 291.6 228 62.7
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 7.9e-77 291.2 259 57.1
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.8e-76 290.0 229 62.0
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 5.7e-75 285.0 273 51.3
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 7.4e-75 284.6 170 77.6
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 9.7e-75 284.3 173 80.3
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.8e-74 282.7 236 61.0
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.8e-73 280.0 238 58.8
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 5.9e-72 275.0 170 78.2
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.0e-71 274.2 197 70.1
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 2.7e-69 266.2 276 49.3
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.8e-68 263.5 209 58.4
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.1e-67 260.8 239 54.4
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 7.0e-65 251.5 176 69.3
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 3.6e-61 239.2 170 67.1
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.3e-59 232.6 148 73.6
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 2.7e-56 223.0 243 45.3
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 1.6e-53 213.8 660 28.5
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.8e-52 210.3 148 70.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 8.8e-52 208.0 234 46.2
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.0e-51 206.8 128 81.2
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 1.1e-46 191.0 217 43.8
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 3.2e-46 189.5 128 75.8
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 6.1e-45 185.3 182 51.1
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.3e-44 183.3 129 70.5
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.5e-43 180.6 129 70.5
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 7.7e-40 168.3 107 70.1
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.1e-38 164.5 95 82.1
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 3.7e-34 149.4 139 51.8
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 1.1e-30 137.9 91 74.7
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 9.5e-30 134.8 106 61.3
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.5e-27 127.5 88 73.9
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.3e-26 124.4 127 49.6
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.9e-26 123.2 254 36.2
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 4.6e-24 115.9 85 68.2
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 4.6e-24 115.9 85 68.2
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 7.8e-24 115.2 92 62.0
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 4.4e-19 99.4 75 61.3
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 5.6e-14 82.4 235 28.1
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 5.8e-11 72.4 76 53.9
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.9e-10 69.3 76 52.6
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.9e-10 69.3 76 52.6


User provided reference genes

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