Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.8e-212 742.3 367 100.0
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 4.9e-157 558.1 373 76.9
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 1.1e-151 540.4 368 75.3
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.8e-151 539.7 373 74.3
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.9e-141 505.8 344 73.5
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 6.4e-141 504.6 347 73.2
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 1.2e-134 483.8 369 66.4
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 3.4e-134 482.3 345 69.9
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 8.4e-133 477.6 368 66.6
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 7.1e-132 474.6 351 67.5
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.6e-131 473.4 328 70.1
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.7e-131 472.6 346 68.8
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 3.5e-131 472.2 328 69.8
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.6e-131 471.9 345 68.1
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 1.0e-130 470.7 360 65.6
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.3e-130 470.3 372 64.8
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.3e-130 470.3 351 66.7
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.3e-130 470.3 351 67.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.8e-130 469.9 351 67.5
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.3e-130 469.5 333 68.8
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 3.9e-130 468.8 349 66.5
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.1e-129 467.2 367 66.2
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 3.3e-129 465.7 331 69.8
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 3.3e-129 465.7 338 68.0
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 9.6e-129 464.2 359 65.5
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.6e-128 463.4 368 64.4
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 6.2e-128 461.5 340 68.2
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 8.1e-128 461.1 338 66.3
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.8e-127 459.9 354 65.5
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 4.0e-127 458.8 337 66.8
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.2e-126 457.2 350 65.7
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 5.8e-126 454.9 346 67.9
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 9.9e-126 454.1 333 68.8
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 9.9e-126 454.1 352 63.6
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 2.2e-125 453.0 359 64.9
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 4.9e-125 451.8 340 66.8
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 8.4e-125 451.1 336 67.9
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 7.1e-124 448.0 342 66.1
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 7.1e-124 448.0 349 66.5
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 1.6e-123 446.8 367 63.8
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 1.6e-123 446.8 360 64.2
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.6e-123 446.8 360 64.7
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 7.9e-123 444.5 361 64.0
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 5.1e-122 441.8 358 64.8
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.1e-121 440.7 379 61.7
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 1.1e-121 440.7 342 65.2
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 4.3e-121 438.7 341 64.8
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.8e-120 436.0 356 64.0
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 6.2e-120 434.9 360 61.1
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 3.1e-119 432.6 343 66.5
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 5.3e-119 431.8 353 61.2
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.2e-118 430.6 338 66.6
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.5e-118 430.3 320 65.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 1.5e-118 430.3 357 62.2
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 2.0e-118 429.9 348 63.5
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 2.6e-118 429.5 331 65.9
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 3.4e-118 429.1 357 60.5
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 7.6e-118 427.9 344 61.6
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.0e-117 427.6 355 63.7
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 1.0e-117 427.6 342 63.2
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 2.2e-117 426.4 349 62.2
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 2.9e-117 426.0 370 60.8
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 5.5e-116 421.8 375 62.7
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 1.2e-115 420.6 313 66.1
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 2.7e-115 419.5 344 59.9
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.7e-115 419.5 351 62.7
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 2.7e-115 419.5 351 62.7
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 3.5e-115 419.1 331 64.7
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 1.3e-114 417.2 340 61.2
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 1.8e-114 416.8 365 58.9
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.8e-114 416.8 302 65.6
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.3e-114 416.4 373 59.0
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 3.0e-114 416.0 345 60.3
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 1.9e-113 413.3 360 60.6
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 1.3e-112 410.6 353 59.5
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 1.3e-112 410.6 339 61.4
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 6.3e-112 408.3 357 60.5
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 8.2e-112 407.9 353 61.2
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.1e-111 407.5 361 59.3
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 3.1e-111 406.0 340 60.9
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 4.1e-111 405.6 297 68.4
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.5e-110 403.7 290 68.3
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 7.6e-110 401.4 333 61.0
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 2.2e-109 399.8 349 60.2
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 2.5e-108 396.4 360 57.8
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 2.5e-108 396.4 375 57.1
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.6e-107 393.7 347 60.5
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 6.1e-107 391.7 256 74.6
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.8e-106 390.2 356 56.5
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 8.2e-104 381.3 331 61.0
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 8.2e-104 381.3 337 59.6
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 5.3e-103 378.6 308 63.6
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 6.9e-103 378.3 348 59.2
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 7.2e-100 368.2 373 55.5
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.2e-94 350.9 261 67.0
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 3.2e-92 342.8 249 64.7
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.0e-85 321.2 340 50.9
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.3e-85 320.9 297 53.5
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 3.0e-82 309.7 225 74.2
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 1.8e-79 300.4 341 46.6
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 2.7e-78 296.6 249 60.6
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 3.8e-77 292.7 232 64.7
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 8.0e-75 285.0 224 67.0
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.8e-74 283.9 313 52.4
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.7e-72 276.2 316 52.5
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 4.8e-72 275.8 322 52.2
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 8.3e-72 275.0 336 44.9
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 1.8e-71 273.9 467 36.8
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 4.1e-71 272.7 214 65.4
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 1.0e-69 268.1 258 53.1
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 4.5e-62 242.7 244 55.3
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 8.6e-61 238.4 226 51.3
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 3.6e-59 233.0 338 42.0
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 2.3e-53 213.8 156 64.7
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 5.8e-49 199.1 124 71.8
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 8.3e-48 195.3 396 34.1
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 8.3e-48 195.3 164 63.4
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 3.5e-46 189.9 127 71.7
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 3.4e-41 173.3 311 35.4
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 7.5e-41 172.2 171 56.7
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 3.2e-39 166.8 109 77.1
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 5.4e-39 166.0 434 31.3
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 5.4e-39 166.0 125 58.4
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 7.3e-36 155.6 123 55.3
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 3.3e-28 130.2 85 70.6
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 9.0e-26 122.1 134 53.0
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 3.4e-25 120.2 79 67.1
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-20 105.1 103 56.3
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 9.6e-20 102.1 63 74.6
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 8.1e-11 72.4 55 67.3
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 9.0e-10 68.9 182 31.3
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 5.8e-09 66.2 127 34.6
PSO675G4619 Papaver somniferum HOM05D000047 ORTHO05D000044 4.9e-08 63.2 106 37.7


User provided reference genes

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