Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 9.7e-104 382.1 195 100.0
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 8.2e-103 379.0 195 99.0
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 4.4e-56 223.8 286 48.3
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 6.9e-49 199.9 291 43.3
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 1.3e-47 195.7 134 68.7
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 8.4e-47 193.0 282 45.0
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 1.5e-43 182.2 134 65.7
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 2.5e-43 181.4 134 64.2
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 3.3e-43 181.0 132 65.9
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 4.3e-43 180.6 136 64.7
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 2.1e-42 178.3 134 66.4
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 2.8e-42 177.9 134 66.4
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 6.2e-42 176.8 134 66.4
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 1.1e-41 176.0 134 63.4
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 1.4e-41 175.6 133 66.2
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 1.8e-41 175.3 134 64.2
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 3.1e-41 174.5 134 64.9
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 4.0e-41 174.1 135 60.7
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 2.0e-40 171.8 133 64.7
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 2.6e-40 171.4 116 69.0
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 3.4e-40 171.0 136 63.2
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 7.6e-40 169.9 134 58.2
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 9.9e-40 169.5 134 62.7
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 9.9e-40 169.5 134 57.5
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 9.9e-40 169.5 136 62.5
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 2.9e-39 167.9 221 43.9
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 8.4e-39 166.4 131 61.8
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 2.1e-37 161.8 215 43.7
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 2.7e-37 161.4 124 60.5
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 2.3e-36 158.3 135 59.3
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 2.3e-36 158.3 133 55.6
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 3.0e-36 157.9 143 58.0
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 3.0e-36 157.9 136 54.4
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 6.7e-36 156.8 135 57.8
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 1.5e-35 155.6 134 55.2
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 1.9e-35 155.2 136 55.9
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 1.9e-35 155.2 128 56.2
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 1.9e-35 155.2 128 56.2
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 3.3e-35 154.5 136 55.9
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 4.3e-35 154.1 134 58.2
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 5.6e-35 153.7 133 58.6
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 4.8e-34 150.6 122 57.4
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 4.8e-34 150.6 134 56.7
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 4.8e-34 150.6 138 56.5
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 8.1e-34 149.8 128 55.5
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 1.1e-33 149.4 134 57.5
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 1.4e-33 149.1 134 57.5
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 2.4e-33 148.3 135 56.3
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 3.1e-33 147.9 132 54.5
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 3.1e-33 147.9 130 54.6
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 4.0e-33 147.5 130 54.6
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 5.3e-33 147.1 138 56.5
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 6.9e-33 146.7 134 53.0
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 9.0e-33 146.4 130 54.6
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 9.0e-33 146.4 130 54.6
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 2.0e-32 145.2 133 53.4
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 3.4e-32 144.4 211 43.1
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 4.5e-32 144.1 130 59.2
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 7.6e-32 143.3 135 53.3
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 3.8e-31 141.0 126 56.3
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 1.4e-30 139.0 144 49.3
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 4.2e-30 137.5 142 52.1
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 5.5e-30 137.1 125 56.0
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 7.1e-30 136.7 134 50.0
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 1.2e-29 136.0 124 52.4
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 1.6e-29 135.6 124 52.4
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 2.1e-29 135.2 137 54.7
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 4.6e-29 134.0 134 49.3
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 4.6e-29 134.0 103 61.2
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 1.0e-28 132.9 129 49.6
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 1.3e-28 132.5 129 49.6
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 3.9e-28 131.0 125 54.4
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 3.9e-28 131.0 125 54.4
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 1.1e-27 129.4 124 50.0
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 3.3e-27 127.9 139 47.5
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 1.3e-26 125.9 137 48.2
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 2.8e-26 124.8 112 52.7
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 3.7e-26 124.4 146 47.3
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 4.8e-26 124.0 130 45.4
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 1.8e-25 122.1 207 40.6
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 1.2e-24 119.4 91 62.6
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 4.5e-24 117.5 131 46.6
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 4.5e-24 117.5 135 43.7
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 1.1e-22 112.8 92 62.0
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 7.1e-22 110.2 87 62.1
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 8.7e-20 103.2 101 54.5
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 3.3e-19 101.3 93 52.7
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 1.3e-18 99.4 70 67.1
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 4.8e-18 97.4 91 52.7
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 2.2e-15 88.6 76 57.9
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 1.1e-14 86.3 80 55.0
FAN17G3133 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.4e-14 85.9 115 39.1
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 2.5e-14 85.1 82 52.4
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 3.9e-12 77.8 135 32.6
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 3.3e-11 74.7 107 41.1
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 6.3e-10 70.5 100 37.0
SalBow7G0144 Salvia bowleyana HOM05D007639 ORTHO05D009509 1.8e-09 68.9 128 35.9
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 1.8e-09 68.9 128 35.9
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 5.3e-09 67.4 131 34.4
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 2.0e-08 65.5 100 42.0
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 3.4e-08 64.7 98 38.8
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 5.9e-08 63.9 102 38.2
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 7.7e-08 63.5 105 35.2
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 2.9e-07 61.6 107 36.4
ECA246G4229 Erigeron canadensis HOM05D000587 ORTHO05D009114 2.9e-07 61.6 101 40.6
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 2.9e-07 61.6 107 35.5
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.9e-07 61.6 101 36.6
Duzib213G0999 Durio zibethinus HOM05D007390 ORTHO05D009114 3.8e-07 61.2 101 37.6
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 3.8e-07 61.2 123 31.7
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 6.5e-07 60.5 103 36.9
Lsat_1_v5_gn_6_101541 Lactuca sativa HOM05D007390 ORTHO05D009114 6.5e-07 60.5 101 39.6
Nn7g38163 Nelumbo nucifera HOM05D005764 ORTHO05D006600 6.5e-07 60.5 102 37.3
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 8.5e-07 60.1 64 46.9
Potri.014G056400 Populus trichocarpa HOM05D000104 ORTHO05D009920 8.5e-07 60.1 128 33.6
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 8.5e-07 60.1 157 31.8
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 1.1e-06 59.7 125 32.8
QL04p014212 Quercus lobata HOM05D007455 ORTHO05D009431 1.4e-06 59.3 102 34.3
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 1.4e-06 59.3 123 31.7
Potri.001G276500 Populus trichocarpa HOM05D007455 ORTHO05D009431 2.5e-06 58.5 98 35.7
Sc16g0011110 Simmondsia chinensis HOM05D007455 ORTHO05D009431 2.5e-06 58.5 112 33.9
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 3.2e-06 58.2 100 35.0
GSVIVG01030107001 Vitis vinifera HOM05D005764 ORTHO05D006600 3.2e-06 58.2 98 38.8
Peaxi162Scf01229g00021 Petunia axillaris HOM05D007455 ORTHO05D009431 4.2e-06 57.8 88 37.5
CDE04G3788 Ceratophyllum demersum HOM05D007639 ORTHO05D009509 5.5e-06 57.4 109 33.9
Sabra16G0170400 Salix brachista HOM05D007455 ORTHO05D009431 5.5e-06 57.4 98 34.7
EL10Ac4g07549 Beta vulgaris HOM05D007390 ORTHO05D009114 7.2e-06 57.0 138 27.5
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 7.2e-06 57.0 101 33.7
Sp6g17720 Schrenkiella parvula HOM05D007390 ORTHO05D009114 7.2e-06 57.0 101 36.6
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 7.2e-06 57.0 109 33.9
Zm00001eb151970 Zea mays HOM05D059268 ORTHO05D009424 7.2e-06 57.0 104 31.7
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 9.4e-06 56.6 127 32.3


User provided reference genes

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