Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008541 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 6.1e-43 177.2 96 100.0
Nitab4.5_0006000g0050 Nicotiana tabacum HOM05D009987 ORTHO05D010465 2.6e-25 118.6 93 72.0
Nitab4.5_0001128g0180 Nicotiana tabacum HOM05D009987 ORTHO05D010465 7.5e-25 117.1 93 71.0
FAN04G1106 Fragaria x ananassa HOM05D009987 ORTHO05D010465 3.9e-21 104.8 94 64.9
FAN08G0761 Fragaria x ananassa HOM05D009987 ORTHO05D010465 2.5e-20 102.1 92 64.1
CSS0049432 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 4.3e-20 101.3 101 59.4
Cfa007553 Carpinus fangiana HOM05D009987 ORTHO05D010465 4.0e-18 94.7 98 57.1
vmacro18191 Vaccinium macrocarpon HOM05D009987 ORTHO05D010465 4.9e-16 87.8 129 47.3
Haze_07327 Corylus avellana HOM05D009987 ORTHO05D010465 4.1e-15 84.7 95 56.8
FAN13G0968 Fragaria x ananassa HOM05D009987 ORTHO05D010465 4.1e-15 84.7 77 59.7
arahy.Tifrunner.gnm1.ann1.VDH4YT Arachis hypogaea HOM05D009987 ORTHO05D010465 1.2e-14 83.2 98 54.1
TAR622G1125 Trochodendron aralioides HOM05D009987 ORTHO05D010465 1.6e-14 82.8 94 54.3
FAN09G0586 Fragaria x ananassa HOM05D009987 ORTHO05D010465 3.5e-14 81.6 131 44.3
arahy.Tifrunner.gnm1.ann1.X9WA5F Arachis hypogaea HOM05D009987 ORTHO05D010465 1.3e-13 79.7 105 51.4
ClCG10G015020 Citrullus lanatus HOM05D009987 ORTHO05D010465 5.1e-13 77.8 94 55.3
Sabra17G0073600 Salix brachista HOM05D009987 ORTHO05D010465 5.6e-12 74.3 75 52.0
Atru.chr8.160 Acer truncatum HOM05D009987 ORTHO05D010465 4.7e-11 71.2 96 47.9
AUR62008417 Chenopodium quinoa HOM05D024303 ORTHO05D010465 8.1e-11 70.5 96 55.2
Oeu011862.1 Olea europaea HOM05D009987 ORTHO05D010465 6.8e-10 67.4 96 50.0
ATR0068G116 Amborella trichopoda HOM05D009987 ORTHO05D010465 2.9e-08 62.0 98 44.9
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.9e-08 61.2 62 54.8
arahy.Tifrunner.gnm1.ann1.C5T4VQ Arachis hypogaea HOM05D009987 ORTHO05D010465 1.1e-07 60.1 114 38.6
Atru.chr1.1896 Acer truncatum HOM05D010327 ORTHO05D010465 1.4e-07 59.7 62 51.6
TPR.G21388 Trifolium pratense HOM05D009987 ORTHO05D010465 1.4e-07 59.7 67 46.3
QL02p058001 Quercus lobata HOM05D010327 ORTHO05D010465 7.1e-07 57.4 47 63.8
QL93p0100_0410 Quercus lobata HOM05D010327 ORTHO05D010465 1.2e-06 56.6 49 61.2
TAR371G0200 Trochodendron aralioides HOM05D001630 ORTHO05D010465 1.6e-06 56.2 60 53.3
HPP92_016272 Vanilla planifolia HOM05D010327 ORTHO05D010465 1.6e-06 56.2 102 45.1
Rhsim13G0216800 Rhododendron simsii HOM05D010327 ORTHO05D010465 3.5e-06 55.1 62 51.6
Ah.11g048390 Amaranthus hybridus HOM05D024303 ORTHO05D010465 6.0e-06 54.3 84 51.2
Sopen02g034130 Solanum pennellii HOM05D029448 ORTHO05D030160 7.8e-06 53.9 57 52.6


User provided reference genes

Program Settings