Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008522 Camellia sinensis var. sinensis HOM05D001232 ORTHO05D001073 4.2e-47 191.0 99 100.0
CSS0045061 Camellia sinensis var. sinensis HOM05D001232 ORTHO05D001073 3.1e-42 174.9 94 96.8
Dinv16008 Davidia involucrata HOM05D001232 ORTHO05D001073 5.6e-15 84.3 92 51.1
Cc02_g20800 Coffea canephora HOM05D001232 ORTHO05D001073 2.1e-14 82.4 95 47.4
Atru.chr6.1297 Acer truncatum HOM05D001232 ORTHO05D001073 1.8e-13 79.3 93 51.6
CANSAT54G0029 Cannabis sativa HOM05D001232 ORTHO05D001073 9.9e-12 73.6 108 42.6
Prupe.8G071300 Prunus persica HOM05D001232 ORTHO05D001073 9.9e-12 73.6 94 43.6
CiPaw.06G158500 Carya illinoinensis HOM05D001232 ORTHO05D001073 1.3e-11 73.2 81 48.1
AUR62027097 Chenopodium quinoa HOM05D001232 ORTHO05D001073 1.3e-11 73.2 93 47.3
AUR62030939 Chenopodium quinoa HOM05D001232 ORTHO05D001073 1.7e-11 72.8 93 47.3
Oeu010522.1 Olea europaea HOM05D001232 ORTHO05D001073 1.7e-11 72.8 92 43.5
Potri.017G042200 Populus trichocarpa HOM05D001232 ORTHO05D001073 2.9e-11 72.0 92 51.1
QL11p025524 Quercus lobata HOM05D001232 ORTHO05D001073 2.9e-11 72.0 96 43.8
Potri.007G116700 Populus trichocarpa HOM05D001232 ORTHO05D001073 3.7e-11 71.6 92 48.9
Ciclev10028671m.g Citrus clementina HOM05D001232 ORTHO05D001073 8.3e-11 70.5 93 46.2
Ca_18389_v3 Cicer arietinum L. HOM05D001232 ORTHO05D001073 2.1e-09 65.9 92 42.4
Glyma.07G182700 Glycine max HOM05D001232 ORTHO05D001073 2.1e-09 65.9 93 41.9
VMungo0251G0209 Vigna mungo HOM05D001232 ORTHO05D001073 2.7e-09 65.5 93 44.1
Lj4g0011547 Lotus japonicus HOM05D001232 ORTHO05D001073 6.0e-09 64.3 92 40.2
Migut.N01100 Erythranthe guttata HOM05D001232 ORTHO05D001073 1.3e-08 63.2 97 43.3
EL10Ac9g22059 Beta vulgaris HOM05D001232 ORTHO05D001073 1.7e-08 62.8 95 42.1
Glyma.08G067200 Glycine max HOM05D001232 ORTHO05D001073 2.3e-08 62.4 93 41.9
RcHm_v2.0_Chr6g0270541 Rosa chinensis HOM05D001232 ORTHO05D001073 2.3e-08 62.4 91 42.9
Manes.07G041200 Manihot esculenta HOM05D001232 ORTHO05D001073 3.9e-08 61.6 65 53.8
FvH4_2g11520 Fragaria vesca HOM05D001232 ORTHO05D001073 5.1e-08 61.2 91 44.0
Sc08g0003980 Simmondsia chinensis HOM05D001232 ORTHO05D001073 6.6e-08 60.8 94 42.6
MSTRG.5288 Avicennia marina HOM05D001232 ORTHO05D001073 8.6e-08 60.5 95 41.1
Medtr4g093730 Medicago truncatula HOM05D001232 ORTHO05D001073 1.9e-07 59.3 91 45.1
TWI14G0185 Tripterygium wilfordii HOM05D001232 ORTHO05D001073 3.3e-07 58.5 92 40.2
Phvul.002G213800 Phaseolus vulgaris HOM05D001232 ORTHO05D001073 5.6e-07 57.8 107 38.3
Actinidia14240 Actinidia chinensis HOM05D001232 ORTHO05D001073 9.5e-07 57.0 95 42.1
Hund00386 Selenicereus undatus HOM05D001232 ORTHO05D001073 1.2e-06 56.6 93 44.1
CsaV3_2G030170 Cucumis sativus L. HOM05D001232 ORTHO05D001073 3.6e-06 55.1 96 38.5
Dinv44872 Davidia involucrata HOM05D001232 ORTHO05D001073 3.6e-06 55.1 96 36.5
FAN24G2842 Fragaria x ananassa HOM05D001232 ORTHO05D001073 3.6e-06 55.1 96 41.7
Gorai.005G226000 Gossypium raimondii HOM05D001232 ORTHO05D001073 3.6e-06 55.1 66 45.5
Actinidia19248 Actinidia chinensis HOM05D001232 ORTHO05D001073 4.7e-06 54.7 98 40.8
Cfa004846 Carpinus fangiana HOM05D001232 ORTHO05D001073 8.1e-06 53.9 96 39.6
FAN27G3477 Fragaria x ananassa HOM05D001232 ORTHO05D001073 8.1e-06 53.9 91 41.8


User provided reference genes

Program Settings