Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008501 Camellia sinensis var. sinensis HOM05D007536 ORTHO05D009390 5.0e-132 475.7 254 100.0
Dinv18987 Davidia involucrata HOM05D007536 ORTHO05D009390 5.1e-60 236.5 188 64.9
vmacro10366 Vaccinium macrocarpon HOM05D007536 ORTHO05D009390 3.3e-51 207.2 192 57.8
Rhsim09G0137000 Rhododendron simsii HOM05D007536 ORTHO05D009390 5.7e-51 206.5 213 53.1
Dinv24676 Davidia involucrata HOM05D007536 ORTHO05D009390 4.5e-48 196.8 144 66.0
GSVIVG01023504001 Vitis vinifera HOM05D007536 ORTHO05D009390 1.7e-47 194.9 187 56.7
Lj2C43T1 Lonicera japonica HOM05D007536 ORTHO05D009390 1.6e-45 188.3 189 51.9
Hma1.2p1_2103F.1_g314080 Hydrangea macrophylla HOM05D007536 ORTHO05D009390 2.7e-45 187.6 184 53.8
TAR636G1433 Trochodendron aralioides HOM05D007536 ORTHO05D009390 4.5e-40 170.2 190 45.3
TAR362G0895 Trochodendron aralioides HOM05D007536 ORTHO05D009390 7.2e-38 162.9 189 44.4
CiPaw.15G107000 Carya illinoinensis HOM05D007536 ORTHO05D009390 6.8e-36 156.4 189 43.4
Sopen04g005180 Solanum pennellii HOM05D007536 ORTHO05D009390 1.2e-35 155.6 197 47.7
QL03p030462 Quercus lobata HOM05D007536 ORTHO05D009390 9.8e-35 152.5 184 46.2
Oeu000315.1 Olea europaea HOM05D007536 ORTHO05D009390 1.7e-34 151.8 196 43.9
Haze_04425 Corylus avellana HOM05D007536 ORTHO05D009390 8.3e-34 149.4 190 43.2
Peaxi162Scf00528g00022 Petunia axillaris HOM05D007536 ORTHO05D009390 8.3e-34 149.4 189 46.6
Atru.chr2.985 Acer truncatum HOM05D007536 ORTHO05D009390 2.4e-33 147.9 189 42.9
Prupe.6G350100 Prunus persica HOM05D007536 ORTHO05D009390 2.4e-33 147.9 184 44.0
Sp1g07270 Schrenkiella parvula HOM05D007536 ORTHO05D009390 3.1e-33 147.5 194 42.8
Solyc04g010050.4 Solanum lycopersicum HOM05D007536 ORTHO05D009390 4.1e-33 147.1 182 48.9
MSTRG.10543 Avicennia marina HOM05D007536 ORTHO05D009390 1.2e-32 145.6 191 44.0
Manes.08G053700 Manihot esculenta HOM05D007536 ORTHO05D009390 2.0e-32 144.8 152 49.3
CANSAT54G0748 Cannabis sativa HOM05D007536 ORTHO05D009390 4.5e-32 143.7 215 40.5
RcHm_v2.0_Chr3g0449641 Rosa chinensis HOM05D007536 ORTHO05D009390 1.0e-31 142.5 191 41.4
Nitab4.5_0003780g0060 Nicotiana tabacum HOM05D007536 ORTHO05D009390 1.7e-31 141.7 187 47.1
Ciclev10019470m.g Citrus clementina HOM05D007536 ORTHO05D009390 8.6e-31 139.4 189 43.4
Nitab4.5_0006737g0040 Nicotiana tabacum HOM05D007536 ORTHO05D009390 1.5e-30 138.7 182 46.2
Cpa.g.sc162.41 Carica papaya HOM05D007536 ORTHO05D009390 2.5e-30 137.9 152 48.0
CAN.G358.142 Capsicum annuum HOM05D007536 ORTHO05D009390 3.3e-30 137.5 191 44.5
MD04G1230200 Malus domestica HOM05D007536 ORTHO05D009390 3.3e-30 137.5 156 46.8
Cc02_g08820 Coffea canephora HOM05D007536 ORTHO05D009390 5.6e-30 136.7 184 39.7
Thecc.05G270900 Theobroma cacao HOM05D007536 ORTHO05D009390 9.5e-30 136.0 185 42.7
FAN09G4642 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.6e-29 135.2 189 40.2
FAN14G0137 Fragaria x ananassa HOM05D007536 ORTHO05D009390 2.1e-29 134.8 184 40.8
Ca_10014_v3 Cicer arietinum L. HOM05D007536 ORTHO05D009390 3.6e-29 134.0 140 51.4
Ah.04g163100 Amaranthus hybridus HOM05D007536 ORTHO05D009390 4.7e-29 133.7 167 46.1
FAN05G1587 Fragaria x ananassa HOM05D007536 ORTHO05D009390 6.1e-29 133.3 138 46.4
FvH4_6g01910 Fragaria vesca HOM05D007536 ORTHO05D009390 1.0e-28 132.5 184 40.2
Aa31LG11G11200 Aethionema arabicum HOM05D007536 ORTHO05D009390 1.8e-28 131.7 187 41.7
Migut.L01514 Erythranthe guttata HOM05D007536 ORTHO05D009390 1.8e-28 131.7 193 40.9
Gohir.A13G167300 Gossypium hirsutum HOM05D007536 ORTHO05D009390 2.3e-28 131.3 187 42.8
Sc20g0000630 Simmondsia chinensis HOM05D007536 ORTHO05D009390 2.3e-28 131.3 190 41.1
Sed0012628 Sechium edule HOM05D007536 ORTHO05D009390 3.0e-28 131.0 153 43.8
MELO3C010129.2 Cucumis melo HOM05D007536 ORTHO05D009390 5.2e-28 130.2 195 40.0
Actinidia34755 Actinidia chinensis HOM05D007536 ORTHO05D009390 6.8e-28 129.8 81 72.8
Thhalv10007213m.g Eutrema salsugineum HOM05D007536 ORTHO05D009390 1.5e-27 128.6 148 45.9
CDE04G1469 Ceratophyllum demersum HOM05D007536 ORTHO05D009390 3.4e-27 127.5 137 48.9
THA.LOC104821264 Tarenaya hassleriana HOM05D007536 ORTHO05D009390 3.4e-27 127.5 146 49.3
C08p49910 Brassica napus HOM05D007536 ORTHO05D009390 7.5e-27 126.3 90 64.4
BolC8t52519H Brassica oleracea HOM05D007536 ORTHO05D009390 7.5e-27 126.3 90 64.4
Gohir.D13G172800 Gossypium hirsutum HOM05D007536 ORTHO05D009390 7.5e-27 126.3 182 39.6
BcaC07g41933 Brassica carinata HOM05D007536 ORTHO05D009390 1.3e-26 125.6 87 66.7
Gorai.013G187800 Gossypium raimondii HOM05D007536 ORTHO05D009390 1.3e-26 125.6 187 41.7
Eucgr.B02149 Eucalyptus grandis HOM05D007536 ORTHO05D009390 2.9e-26 124.4 185 41.6
Carub.0001s0797 Capsella rubella HOM05D007536 ORTHO05D009390 4.9e-26 123.6 140 46.4
FAN05G2252 Fragaria x ananassa HOM05D007536 ORTHO05D009390 4.9e-26 123.6 104 53.8
FAN14G3895 Fragaria x ananassa HOM05D007536 ORTHO05D009390 6.4e-26 123.2 104 53.8
BraA09t41926Z Brassica rapa HOM05D007536 ORTHO05D009390 8.3e-26 122.9 86 66.3
COL.COLO4_15481 Corchorus olitorius HOM05D007536 ORTHO05D009390 1.1e-25 122.5 185 39.5
ClCG03G009740 Citrullus lanatus HOM05D007536 ORTHO05D009390 3.2e-25 120.9 193 37.3
AT1G08610 Arabidopsis thaliana HOM05D007536 ORTHO05D009390 2.0e-24 118.2 138 44.9
Duzib177G0261 Durio zibethinus HOM05D007536 ORTHO05D009390 2.0e-24 118.2 190 40.5
Gohir.D11G257700 Gossypium hirsutum HOM05D007536 ORTHO05D009390 2.0e-24 118.2 191 40.8
Gorai.007G276000 Gossypium raimondii HOM05D007536 ORTHO05D009390 2.0e-24 118.2 191 40.8
Nn1g02810 Nelumbo nucifera HOM05D007536 ORTHO05D009390 2.0e-24 118.2 190 37.9
Glyma.20G222900 Glycine max HOM05D007536 ORTHO05D009390 2.7e-24 117.9 193 36.8
MBI10_g13809_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 2.7e-24 117.9 157 43.3
Sabra19G0031900 Salix brachista HOM05D007536 ORTHO05D009390 2.7e-24 117.9 182 40.1
AL1G19040 Arabidopsis lyrata HOM05D007536 ORTHO05D009390 5.9e-24 116.7 139 44.6
Sed0002849 Sechium edule HOM05D007536 ORTHO05D009390 5.9e-24 116.7 149 40.3
DCAR_023085 Daucus carota HOM05D007536 ORTHO05D009390 7.8e-24 116.3 187 36.9
TWI38G0843 Tripterygium wilfordii HOM05D007536 ORTHO05D009390 7.8e-24 116.3 189 38.1
Gohir.A11G247400 Gossypium hirsutum HOM05D007536 ORTHO05D009390 2.3e-23 114.8 192 39.6
Lalb_Chr02g0149121 Lupinus albus HOM05D007536 ORTHO05D009390 2.3e-23 114.8 196 36.7
CARHR008520 Cardamine hirsuta HOM05D007536 ORTHO05D009390 1.1e-22 112.5 127 41.7
COL.COLO4_15479 Corchorus olitorius HOM05D007536 ORTHO05D009390 4.3e-22 110.5 183 37.2
Aqoxy5G00211 Aquilegia oxysepala HOM05D007536 ORTHO05D009390 5.6e-22 110.2 176 39.8
CsaV3_1G045080 Cucumis sativus L. HOM05D007536 ORTHO05D009390 7.3e-22 109.8 193 34.7
Potri.019G019200 Populus trichocarpa HOM05D007536 ORTHO05D009390 7.3e-22 109.8 182 39.0
AUR62004838 Chenopodium quinoa HOM05D007536 ORTHO05D009390 6.2e-21 106.7 187 37.4
A09p65820 Brassica napus HOM05D007536 ORTHO05D009390 1.0e-20 105.9 75 65.3
AUR62040928 Chenopodium quinoa HOM05D007536 ORTHO05D009390 1.4e-20 105.5 192 38.5
PGR142G0030 Punica granatum HOM05D007536 ORTHO05D009390 3.1e-20 104.4 180 40.6
SalBow1G3025 Salvia bowleyana HOM05D007536 ORTHO05D009390 1.5e-19 102.1 78 61.5
PSO210G0145 Papaver somniferum HOM05D007536 ORTHO05D009390 2.6e-19 101.3 126 42.1
Medtr1g080120 Medicago truncatula HOM05D007536 ORTHO05D009390 3.4e-19 100.9 110 48.2
Phvul.008G151830 Phaseolus vulgaris HOM05D007536 ORTHO05D009390 9.8e-19 99.4 109 46.8
Lj5g0027095 Lotus japonicus HOM05D007536 ORTHO05D009390 2.2e-18 98.2 190 35.3
VMungo0720G1101 Vigna mungo HOM05D007536 ORTHO05D009390 3.7e-18 97.4 121 43.8
ECA233G3269 Erigeron canadensis HOM05D007536 ORTHO05D009390 1.9e-17 95.1 185 34.1
Lsat_1_v5_gn_8_24901 Lactuca sativa HOM05D007536 ORTHO05D009390 2.4e-17 94.7 118 42.4
Lalb_Chr21g0311181 Lupinus albus HOM05D007536 ORTHO05D009390 3.2e-17 94.4 188 34.6
TPR.G22324 Trifolium pratense HOM05D007536 ORTHO05D009390 4.6e-16 90.5 105 43.8
FAN02G3965 Fragaria x ananassa HOM05D007536 ORTHO05D009390 6.0e-16 90.1 71 59.2
MBI07_g16910_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 1.0e-15 89.4 100 46.0
HanXRQChr07g0204491 Helianthus annuus HOM05D007536 ORTHO05D009390 4.3e-14 84.0 184 32.1
Psat6g142640 Pisum sativum HOM05D007536 ORTHO05D009390 2.8e-13 81.3 108 40.7
ATR0736G097 Amborella trichopoda HOM05D007536 ORTHO05D009390 2.9e-10 71.2 57 56.1
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.4e-09 68.9 80 48.8
SGA_v2.0_scaffold21G09411 Striga asiatica HOM05D005874 ORTHO05D007206 1.1e-06 59.3 64 42.2
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 1.9e-06 58.5 91 37.4


User provided reference genes

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