Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-75 285.4 141 100.0
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-57 225.3 112 96.4
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.0e-55 217.6 109 95.4
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-52 209.9 102 97.1
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.1e-52 207.2 112 89.3
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-50 202.6 112 87.5
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.0e-46 188.7 102 87.3
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.0e-46 188.7 99 89.9
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.1e-39 166.0 113 71.7
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-39 165.2 112 70.5
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-39 165.2 112 70.5
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.6e-39 164.9 112 71.4
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-37 160.2 111 70.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.2e-32 141.0 111 61.3
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.6e-31 138.3 112 59.8
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.1e-27 125.2 81 72.8
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-22 110.2 65 78.5
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.2e-16 87.8 61 72.1
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.6e-15 86.7 62 72.6
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.6e-15 86.7 92 52.2
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.8e-11 73.2 121 40.5
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 9.1e-11 70.9 90 40.0
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 9.1e-11 70.9 91 46.2
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 1.2e-10 70.5 121 39.7
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 1.2e-10 70.5 121 39.7
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 4.5e-10 68.6 114 37.7
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 5.9e-10 68.2 121 38.8
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 7.7e-10 67.8 90 40.0
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 7.7e-10 67.8 112 42.0
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 1.0e-09 67.4 102 36.3
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 1.3e-09 67.0 111 35.1
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.9e-09 65.9 114 36.0
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 3.8e-09 65.5 90 38.9
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 6.5e-09 64.7 113 34.5
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 6.5e-09 64.7 105 35.2
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.1e-08 63.9 109 35.8
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.5e-08 62.8 95 41.1
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 4.2e-08 62.0 114 40.4
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 5.5e-08 61.6 76 44.7
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 5.5e-08 61.6 78 37.2
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 5.5e-08 61.6 79 36.7
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.2e-07 60.5 106 36.8
Medtr3g082340 Medicago truncatula HOM05D009148 ORTHO05D011895 1.6e-07 60.1 143 37.1
Medtr3g082420 Medicago truncatula HOM05D009148 ORTHO05D011895 1.6e-07 60.1 143 37.1
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.7e-07 59.3 112 40.2
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.7e-07 58.5 124 37.9
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 6.1e-07 58.2 87 37.9
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 8.0e-07 57.8 94 39.4
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.4e-06 57.0 64 48.4
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 1.4e-06 57.0 85 40.0
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 1.4e-06 57.0 85 40.0
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.8e-06 56.6 106 32.1
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.8e-06 56.6 97 38.1
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 3.0e-06 55.8 96 37.5
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.2e-06 55.1 92 34.8
Migut.F00817 Erythranthe guttata HOM05D020956 ORTHO05D015643 5.2e-06 55.1 75 36.0
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.7e-06 54.7 92 33.7
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 6.7e-06 54.7 73 38.4
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.7e-06 54.7 106 34.0
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 8.8e-06 54.3 101 36.6
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.8e-06 54.3 97 35.1


User provided reference genes

Program Settings