Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008464 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 7.2e-37 156.8 81 100.0
CSS0025668 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.8e-35 152.1 81 96.3
CSS0008026 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 8.8e-35 149.8 80 93.8
CSS0043173 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 4.4e-34 147.5 79 93.7
Dinv14951 Davidia involucrata HOM05D001613 ORTHO05D001556 5.9e-31 137.1 80 83.8
Dinv20217 Davidia involucrata HOM05D000599 ORTHO05D006883 5.0e-30 134.0 80 81.2
Haze_09378 Corylus avellana HOM05D000599 ORTHO05D006883 1.5e-29 132.5 80 80.0
Lj1A836G33 Lonicera japonica HOM05D000599 ORTHO05D006883 1.5e-29 132.5 80 81.2
Nitab4.5_0000332g0200 Nicotiana tabacum HOM05D000599 ORTHO05D006883 1.9e-29 132.1 80 81.2
Rhsim06G0203600 Rhododendron simsii HOM05D000599 ORTHO05D006883 1.9e-29 132.1 80 82.5
QL08p023388 Quercus lobata HOM05D000599 ORTHO05D006883 2.5e-29 131.7 80 77.5
vmacro11900 Vaccinium macrocarpon HOM05D000599 ORTHO05D006883 2.5e-29 131.7 80 81.2
GSVIVG01014259001 Vitis vinifera HOM05D000599 ORTHO05D006883 3.3e-29 131.3 80 78.8
Cfa020625 Carpinus fangiana HOM05D000599 ORTHO05D006883 7.3e-29 130.2 80 78.8
Duzib170G0842 Durio zibethinus HOM05D000599 ORTHO05D006883 1.6e-28 129.0 80 76.2
Aqoxy4G00576 Aquilegia oxysepala HOM05D000599 ORTHO05D006883 2.1e-28 128.6 78 79.5
Oeu025350.3 Olea europaea HOM05D000599 ORTHO05D006883 2.8e-28 128.3 80 78.8
EL10Ac4g08277 Beta vulgaris HOM05D000599 ORTHO05D006883 3.6e-28 127.9 80 75.0
HanXRQChr10g0302461 Helianthus annuus HOM05D000599 ORTHO05D006883 3.6e-28 127.9 80 76.2
CAN.G329.7 Capsicum annuum HOM05D000599 ORTHO05D006883 4.7e-28 127.5 80 77.5
CiPaw.11G166300 Carya illinoinensis HOM05D000599 ORTHO05D006883 4.7e-28 127.5 80 73.8
ECA234G4269 Erigeron canadensis HOM05D001613 ORTHO05D006883 4.7e-28 127.5 80 75.0
MBI06_g45594_MAGBIO Magnolia biondii HOM05D000599 ORTHO05D006883 4.7e-28 127.5 80 78.8
Peaxi162Scf00000g00284 Petunia axillaris HOM05D000599 ORTHO05D006883 4.7e-28 127.5 80 77.5
DCAR_021003 Daucus carota HOM05D000599 ORTHO05D006883 6.1e-28 127.1 80 73.8
Manes.12G158400 Manihot esculenta HOM05D000599 ORTHO05D006883 6.1e-28 127.1 80 75.0
TWI38G1662 Tripterygium wilfordii HOM05D000599 ORTHO05D006883 6.1e-28 127.1 80 75.0
Os01g0753100 Oryza sativa ssp. japonica HOM05D000599 ORTHO05D006883 8.0e-28 126.7 80 75.0
ATR0602G106 Amborella trichopoda HOM05D000599 ORTHO05D006883 1.0e-27 126.3 80 73.8
Migut.M00767 Erythranthe guttata HOM05D000599 ORTHO05D006883 1.0e-27 126.3 80 73.8
TAR627G0901 Trochodendron aralioides HOM05D000599 ORTHO05D006883 1.0e-27 126.3 80 77.5
Duzib213G1012 Durio zibethinus HOM05D000599 ORTHO05D006883 1.4e-27 125.9 80 75.0
Nn1g04277 Nelumbo nucifera HOM05D000599 ORTHO05D006883 1.4e-27 125.9 80 76.2
Zm00001eb152950 Zea mays HOM05D000599 ORTHO05D006883 1.8e-27 125.6 80 73.8
CiPaw.12G116700 Carya illinoinensis HOM05D000599 ORTHO05D006883 2.3e-27 125.2 80 75.0
Eucgr.F01180 Eucalyptus grandis HOM05D000599 ORTHO05D006883 2.3e-27 125.2 80 76.2
Cc05_g11570 Coffea canephora HOM05D000599 ORTHO05D006883 3.0e-27 124.8 80 75.0
AUR62036135 Chenopodium quinoa HOM05D000599 ORTHO05D006883 4.0e-27 124.4 80 73.8
Solyc12g014050.2 Solanum lycopersicum HOM05D000599 ORTHO05D006883 4.0e-27 124.4 80 75.0
Sopen12g005790 Solanum pennellii HOM05D000599 ORTHO05D006883 4.0e-27 124.4 80 75.0
CANSAT35G1865 Cannabis sativa HOM05D000599 ORTHO05D006883 5.2e-27 124.0 80 75.0
AUR62019503 Chenopodium quinoa HOM05D000599 ORTHO05D006883 5.2e-27 124.0 80 73.8
Phvul.005G069200 Phaseolus vulgaris HOM05D000599 ORTHO05D006883 5.2e-27 124.0 80 73.8
PGR083G0548 Punica granatum HOM05D000599 ORTHO05D006883 5.2e-27 124.0 80 76.2
Glyma.12G227400 Glycine max HOM05D000599 ORTHO05D006883 6.8e-27 123.6 80 72.5
Lalb_Chr25g0286171 Lupinus albus HOM05D000599 ORTHO05D006883 6.8e-27 123.6 80 73.8
Potri.001G373200 Populus trichocarpa HOM05D000599 ORTHO05D006883 6.8e-27 123.6 80 75.0
PGSC0003DMG400015372 Solanum tuberosum HOM05D000599 ORTHO05D006883 6.8e-27 123.6 80 75.0
Lsat_1_v5_gn_5_128780 Lactuca sativa HOM05D000599 ORTHO05D006883 8.9e-27 123.2 80 71.2
THA.LOC104810454 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 8.9e-27 123.2 80 73.8
AL3G27440 Arabidopsis lyrata HOM05D000599 ORTHO05D006883 1.2e-26 122.9 80 72.5
AT3G15090 Arabidopsis thaliana HOM05D000599 ORTHO05D006883 1.2e-26 122.9 80 72.5
Glyma.13G272900 Glycine max HOM05D000599 ORTHO05D006883 1.2e-26 122.9 80 72.5
HPP92_021507 Vanilla planifolia HOM05D000599 ORTHO05D006883 1.2e-26 122.9 80 72.5
Cpa.g.sc80.13 Carica papaya HOM05D000599 ORTHO05D006883 1.5e-26 122.5 80 73.8
Gohir.D01G046600 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.5e-26 122.5 80 73.8
Gorai.002G066100 Gossypium raimondii HOM05D000599 ORTHO05D006883 1.5e-26 122.5 80 73.8
Hund22810 Selenicereus undatus HOM05D000599 ORTHO05D006883 1.5e-26 122.5 80 72.5
Sabra16G0245600 Salix brachista HOM05D000599 ORTHO05D006883 2.0e-26 122.1 78 76.9
Sp3g13290 Schrenkiella parvula HOM05D000599 ORTHO05D006883 2.0e-26 122.1 80 73.8
VMungo1080G1405 Vigna mungo HOM05D000599 ORTHO05D006883 2.0e-26 122.1 80 73.8
DCAR_019576 Daucus carota HOM05D000599 ORTHO05D006883 2.6e-26 121.7 80 71.2
RcHm_v2.0_Chr5g0031931 Rosa chinensis HOM05D000599 ORTHO05D006883 2.6e-26 121.7 80 71.2
ClCG05G009200 Citrullus lanatus HOM05D000599 ORTHO05D006883 3.4e-26 121.3 80 72.5
FAN11G3855 Fragaria x ananassa HOM05D000599 ORTHO05D006883 3.4e-26 121.3 80 71.2
FAN16G1937 Fragaria x ananassa HOM05D000599 ORTHO05D006883 3.4e-26 121.3 80 71.2
Sed0014270 Sechium edule HOM05D000599 ORTHO05D006883 3.4e-26 121.3 80 71.2
SGA_v2.0_scaffold73G24221 Striga asiatica HOM05D000599 ORTHO05D006883 3.4e-26 121.3 80 73.8
Thhalv10020985m.g Eutrema salsugineum HOM05D000599 ORTHO05D006883 4.4e-26 120.9 80 72.5
FvH4_3g19130 Fragaria vesca HOM05D000599 ORTHO05D006883 4.4e-26 120.9 80 70.0
CARHR090050 Cardamine hirsuta HOM05D000599 ORTHO05D006883 5.7e-26 120.6 80 70.0
Lj3g0008187 Lotus japonicus HOM05D000599 ORTHO05D006883 5.7e-26 120.6 80 70.0
A03p39150 Brassica napus HOM05D000599 ORTHO05D006883 9.8e-26 119.8 80 71.2
BraA03t13064Z Brassica rapa HOM05D000599 ORTHO05D006883 9.8e-26 119.8 80 71.2
Atru.chr2.2379 Acer truncatum HOM05D000599 ORTHO05D006883 1.3e-25 119.4 80 71.2
FAN21G2449 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.3e-25 119.4 80 70.0
Carub.0003s1473 Capsella rubella HOM05D000599 ORTHO05D006883 1.7e-25 119.0 80 68.8
BcaC01g03898 Brassica carinata HOM05D000599 ORTHO05D006883 2.2e-25 118.6 80 70.0
A05p34360 Brassica napus HOM05D000599 ORTHO05D006883 2.2e-25 118.6 80 71.2
C03p47500 Brassica napus HOM05D000599 ORTHO05D006883 2.2e-25 118.6 80 70.0
BolC3t17014H Brassica oleracea HOM05D000599 ORTHO05D006883 2.2e-25 118.6 80 70.0
BraA05t22256Z Brassica rapa HOM05D000599 ORTHO05D006883 2.2e-25 118.6 80 71.2
MD03G1236200 Malus domestica HOM05D000599 ORTHO05D006883 2.2e-25 118.6 80 71.2
BcaB06g29534 Brassica carinata HOM05D000599 ORTHO05D006883 2.9e-25 118.2 80 71.2
C05p52130 Brassica napus HOM05D000599 ORTHO05D006883 2.9e-25 118.2 80 71.2
BolC5t33898H Brassica oleracea HOM05D000599 ORTHO05D006883 2.9e-25 118.2 80 71.2
Prupe.4G173000 Prunus persica HOM05D000599 ORTHO05D006883 2.9e-25 118.2 80 72.5
CsaV3_3G019590 Cucumis sativus L. HOM05D000599 ORTHO05D006883 3.7e-25 117.9 80 68.8
SalBow7G1016 Salvia bowleyana HOM05D000599 ORTHO05D006883 3.7e-25 117.9 80 70.0
Ciclev10008721m.g Citrus clementina HOM05D000599 ORTHO05D006883 6.4e-25 117.1 80 68.8
Ah.04g164460 Amaranthus hybridus HOM05D000599 ORTHO05D006883 8.3e-25 116.7 80 68.8
Ca_04028_v3 Cicer arietinum L. HOM05D000599 ORTHO05D006883 8.3e-25 116.7 80 67.5
MELO3C019391.2 Cucumis melo HOM05D000599 ORTHO05D006883 8.3e-25 116.7 80 68.8
PSO210G4318 Papaver somniferum HOM05D000599 ORTHO05D006883 8.3e-25 116.7 80 65.0
PSO832G3682 Papaver somniferum HOM05D000599 ORTHO05D006883 8.3e-25 116.7 80 65.0
Sc16g0007340 Simmondsia chinensis HOM05D000599 ORTHO05D006883 8.3e-25 116.7 80 66.2
arahy.Tifrunner.gnm1.ann1.10FGX8 Arachis hypogaea HOM05D000599 ORTHO05D006883 1.1e-24 116.3 80 68.8
MD11G1257100 Malus domestica HOM05D000599 ORTHO05D006883 1.4e-24 115.9 80 68.8
arahy.Tifrunner.gnm1.ann1.PD8C8E Arachis hypogaea HOM05D000599 ORTHO05D006883 1.8e-24 115.5 79 70.9
Medtr2g078520 Medicago truncatula HOM05D000599 ORTHO05D006883 3.5e-23 111.3 80 66.2
unitig_52.g17400 Utricularia gibba HOM05D000599 ORTHO05D006883 3.0e-22 108.2 78 67.9
Psat5g241360 Pisum sativum HOM05D000599 ORTHO05D006883 5.0e-22 107.5 80 65.0
RcHm_v2.0_Chr5g0032041 Rosa chinensis HOM05D000599 ORTHO05D006883 3.3e-21 104.8 73 67.1
Aa31LG8G2300 Aethionema arabicum HOM05D000599 ORTHO05D006883 1.2e-20 102.8 106 52.8
Mapoly0049s0129 Marchantia polymorpha HOM05D000599 ORTHO05D006883 6.2e-20 100.5 80 61.2
CSS0039326 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 3.1e-19 98.2 74 73.0
Gohir.A01G060100 Gossypium hirsutum HOM05D000599 ORTHO05D006883 3.1e-19 98.2 80 62.5
RcHm_v2.0_Chr5g0032001 Rosa chinensis HOM05D000599 ORTHO05D006883 4.0e-19 97.8 67 67.2
SMO116G0426 Selaginella moellendorffii HOM05D000599 ORTHO05D006883 1.2e-18 96.3 78 60.3
Pp3c14_1550 Physcomitrium patens HOM05D000599 ORTHO05D006883 4.4e-18 94.4 78 57.7
SEGI_19921 Sequoiadendron giganteum HOM05D000599 ORTHO05D006883 6.4e-17 90.5 66 68.2
Actinidia12546 Actinidia chinensis HOM05D000599 ORTHO05D006883 2.4e-16 88.6 60 73.3
CBR_g49987 Chara braunii HOM05D000599 ORTHO05D006883 7.0e-16 87.0 82 54.9
Oeu007447.1 Olea europaea HOM05D008214 ORTHO05D006883 1.0e-14 83.2 69 59.4
AagrBONN_evm.TU.Sc2ySwM_368.514 Anthoceros agrestis HOM05D000599 ORTHO05D006883 5.2e-11 70.9 84 51.2
Dinv15354 Davidia involucrata HOM05D000330 ORTHO05D000209 5.1e-06 54.3 30 86.7


User provided reference genes

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