Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-104 383.3 202 100.0
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-96 355.1 200 93.0
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.9e-96 354.4 202 93.1
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.2e-86 321.6 200 86.0
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.5e-86 321.2 201 82.6
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.5e-72 275.0 201 74.1
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-71 273.5 201 73.6
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.9e-71 271.9 201 74.1
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-66 256.9 202 65.3
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.3e-66 254.2 194 71.1
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.4e-57 224.9 200 66.0
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-56 223.8 200 68.0
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.4e-51 205.7 201 57.2
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-47 193.4 127 78.7
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.0e-44 182.2 205 53.2
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.9e-43 177.6 143 69.2
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.8e-37 158.7 111 70.3
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-35 154.1 201 48.8
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.0e-23 114.4 194 43.8
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.5e-22 109.8 183 42.6
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.5e-19 100.5 180 40.0
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 7.9e-16 88.2 128 44.5
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 9.6e-14 81.3 130 38.5
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 2.8e-13 79.7 137 34.3
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 3.7e-13 79.3 128 42.2
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 3.7e-13 79.3 128 42.2
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 4.8e-13 79.0 156 37.8
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 4.8e-13 79.0 125 38.4
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 3.1e-12 76.3 121 38.8
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 9.0e-12 74.7 137 33.6
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 9.0e-12 74.7 128 35.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.5e-11 73.9 121 38.0
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 1.5e-11 73.9 137 33.6
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 3.4e-11 72.8 124 38.7
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 5.8e-11 72.0 101 40.6
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.2e-10 70.1 131 39.7
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.2e-10 70.1 139 36.0
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.9e-10 69.7 131 37.4
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.9e-10 69.7 131 36.6
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.8e-10 69.3 201 30.3
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.8e-10 69.3 201 30.3
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.0e-10 68.9 131 37.4
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.5e-10 68.6 122 37.7
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 6.5e-10 68.6 111 37.8
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 8.4e-10 68.2 131 30.5
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.1e-09 67.8 124 37.1
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 1.1e-09 67.8 132 32.6
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 1.9e-09 67.0 102 38.2
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.5e-09 66.6 131 35.9
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 3.2e-09 66.2 133 36.1
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 4.2e-09 65.9 133 36.8
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.6e-08 63.9 117 36.8
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.1e-08 63.5 106 36.8
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 2.7e-08 63.2 133 35.3
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.5e-08 62.8 121 34.7
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 6.1e-08 62.0 128 34.4
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 7.9e-08 61.6 122 35.2
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 7.9e-08 61.6 111 35.1
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.0e-07 61.2 171 29.2
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 1.3e-07 60.8 118 34.7
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.3e-07 60.8 121 31.4
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 1.8e-07 60.5 108 35.2
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 1.8e-07 60.5 108 35.2
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.8e-07 60.5 117 34.2
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.3e-07 60.1 177 28.8
Rhsim13G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-07 60.1 58 53.4
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 3.0e-07 59.7 125 32.8
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.0e-07 59.7 122 35.2
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.0e-07 59.7 108 31.5
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 3.0e-07 59.7 88 34.1
PGSC0003DMG400006632 Solanum tuberosum HOM05D010354 ORTHO05D012840 3.0e-07 59.7 145 33.8
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 3.9e-07 59.3 129 34.9
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 3.9e-07 59.3 104 38.5
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 5.1e-07 58.9 130 36.2
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 5.1e-07 58.9 121 35.5
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 6.7e-07 58.5 124 33.1
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 6.7e-07 58.5 94 38.3
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 1.1e-06 57.8 113 37.2
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 1.1e-06 57.8 116 36.2
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 1.1e-06 57.8 112 34.8
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.1e-06 57.8 129 30.2
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.1e-06 57.8 130 33.1
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 1.5e-06 57.4 121 33.9
Lj1A798T44 Lonicera japonica HOM05D011954 ORTHO05D014236 1.5e-06 57.4 126 31.0
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.5e-06 57.4 89 36.0
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.5e-06 57.4 123 30.9
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-06 57.4 106 34.9
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-06 57.4 110 32.7
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.9e-06 57.0 84 33.3
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.5e-06 56.6 106 36.8
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 2.5e-06 56.6 89 37.1
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.3e-06 56.2 151 29.8
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 3.3e-06 56.2 121 32.2
Peaxi162Scf01013g00008 Petunia axillaris HOM05D008744 ORTHO05D010647 3.3e-06 56.2 105 31.4
Sed0024472 Sechium edule HOM05D034586 ORTHO05D007789 3.3e-06 56.2 134 35.1
AL7G39700 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 4.3e-06 55.8 138 33.3
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 4.3e-06 55.8 88 33.0
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 4.3e-06 55.8 84 33.3
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 5.7e-06 55.5 105 34.3
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 7.4e-06 55.1 113 31.9
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.4e-06 55.1 111 32.4
arahy.Tifrunner.gnm1.ann1.82LERJ Arachis hypogaea HOM05D010841 ORTHO05D007789 9.7e-06 54.7 127 31.5
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 9.7e-06 54.7 115 33.0
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 9.7e-06 54.7 121 39.7
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 9.7e-06 54.7 157 27.4


User provided reference genes

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