Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 5.3e-41 170.6 88 100.0
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.0e-15 86.7 78 57.7
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.2e-15 85.5 78 57.7
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.4e-14 82.8 81 58.0
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 3.2e-14 81.6 81 56.8
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 1.0e-12 76.6 83 54.2
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 5.1e-12 74.3 81 54.3
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 5.1e-12 74.3 81 54.3
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 6.7e-12 73.9 80 55.0
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 1.1e-11 73.2 82 52.4
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 7.4e-11 70.5 82 50.0
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 2.2e-10 68.9 81 53.1
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 4.8e-10 67.8 81 50.6
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 8.2e-10 67.0 82 46.3
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.1e-09 66.6 79 51.9
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 2.4e-09 65.5 82 47.6
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 2.4e-09 65.5 82 47.6
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 3.1e-09 65.1 78 48.7
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 4.1e-09 64.7 86 47.7
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 5.3e-09 64.3 82 47.6
Glyma.05G026000 Glycine max HOM05D007106 ORTHO05D007770 6.9e-09 63.9 80 47.5
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 1.2e-08 63.2 76 44.7
Glyma.17G100900 Glycine max HOM05D007106 ORTHO05D007770 1.5e-08 62.8 80 46.2
TAR622G1352 Trochodendron aralioides HOM05D007106 ORTHO05D007770 2.0e-08 62.4 81 49.4
Lj4g0015417 Lotus japonicus HOM05D007106 ORTHO05D007770 2.6e-08 62.0 80 45.0
Phvul.003G189400 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 2.6e-08 62.0 82 48.8
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 3.4e-08 61.6 78 46.2
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 7.7e-08 60.5 82 45.1
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 1.0e-07 60.1 83 39.8
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 1.3e-07 59.7 85 51.8
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 1.3e-07 59.7 76 48.7
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 1.7e-07 59.3 84 47.6
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 1.7e-07 59.3 81 44.4
TPR.G9262 Trifolium pratense HOM05D007106 ORTHO05D007770 1.7e-07 59.3 88 43.2
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 2.2e-07 58.9 87 46.0
Nn4g23194 Nelumbo nucifera HOM05D007106 ORTHO05D007770 2.2e-07 58.9 87 49.4
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 2.9e-07 58.5 86 41.9
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 3.8e-07 58.2 81 42.0
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 5.0e-07 57.8 81 48.1
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 6.5e-07 57.4 85 42.4
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 8.5e-07 57.0 83 44.6
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 8.5e-07 57.0 86 44.2
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 8.5e-07 57.0 86 44.2
EL10Ac5g11028 Beta vulgaris HOM05D007106 ORTHO05D007770 1.4e-06 56.2 84 46.4
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 1.4e-06 56.2 91 47.3
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 1.4e-06 56.2 82 46.3
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 1.4e-06 56.2 81 49.4
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 2.5e-06 55.5 86 44.2
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 2.5e-06 55.5 85 43.5
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 3.2e-06 55.1 81 43.2
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 3.2e-06 55.1 81 43.2
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 4.2e-06 54.7 83 44.6
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 4.2e-06 54.7 81 43.2
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 5.5e-06 54.3 91 37.4
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 7.2e-06 53.9 82 41.5
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 9.4e-06 53.5 83 42.2


User provided reference genes

Program Settings