Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.5e-52 207.6 147 100.0
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.5e-52 207.6 147 100.0
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.1e-35 153.7 148 83.1
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.1e-35 153.7 148 83.1
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.4e-33 146.7 147 80.3
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 6.7e-33 144.4 147 79.6
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 6.3e-31 137.9 151 78.8
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 7.7e-29 131.0 142 55.6
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 2.5e-27 125.9 144 72.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 2.7e-26 122.5 151 53.6
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 8.0e-26 120.9 147 72.1
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 1.4e-25 120.2 147 69.4
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 4.0e-25 118.6 129 79.8
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 5.2e-25 118.2 152 71.7
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 2.6e-24 115.9 147 71.4
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.6e-24 115.9 145 71.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 7.5e-24 114.4 147 69.4
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.3e-23 113.6 148 50.7
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.3e-23 113.6 148 69.6
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 2.2e-23 112.8 132 72.0
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.8e-23 112.5 132 75.8
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 4.1e-22 108.6 151 68.9
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 7.0e-22 107.8 139 69.8
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.0e-20 104.0 109 81.7
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.7e-20 103.2 109 83.5
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 3.8e-20 102.1 149 66.4
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 5.0e-20 101.7 150 69.3
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 8.6e-20 100.9 148 67.6
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.1e-19 100.5 143 69.9
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 1.1e-19 100.5 155 65.8
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.5e-19 100.1 143 69.9
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 3.3e-19 99.0 130 70.0
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 5.5e-19 98.2 124 74.2
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 5.5e-19 98.2 147 64.6
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 9.5e-19 97.4 153 66.0
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.2e-18 97.1 130 70.8
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.6e-18 96.7 122 73.8
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.8e-18 95.9 151 67.5
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.8e-18 95.9 150 67.3
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.7e-18 95.1 143 67.1
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 6.1e-18 94.7 127 73.2
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 6.1e-18 94.7 147 61.2
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.8e-17 93.2 153 45.1
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 6.8e-17 91.3 160 45.0
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 1.2e-16 90.5 147 63.9
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 2.0e-16 89.7 149 62.4
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 2.6e-16 89.4 110 76.4
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 3.4e-16 89.0 124 69.4
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 4.4e-16 88.6 144 61.1
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 5.7e-16 88.2 135 65.9
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 7.5e-16 87.8 131 67.2
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 9.8e-16 87.4 136 66.9
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 1.3e-15 87.0 137 65.0
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 1.7e-15 86.7 56 78.6
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 1.7e-15 86.7 149 63.8
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.7e-15 86.7 140 64.3
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 2.2e-15 86.3 110 67.3
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 3.7e-15 85.5 124 69.4
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 8.3e-15 84.3 137 66.4
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.4e-14 83.6 149 60.4
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 7.0e-14 81.3 148 58.8
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 1.6e-13 80.1 135 63.7
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 2.0e-13 79.7 163 57.1
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 3.5e-13 79.0 156 60.3
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 4.5e-13 78.6 132 63.6
Nitab4.5_0000960g0100 Nicotiana tabacum HOM05D006719 ORTHO05D007063 7.8e-13 77.8 152 61.8
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.7e-12 76.6 153 59.5
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 1.7e-12 76.6 161 52.8
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 2.3e-12 76.3 144 59.7
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 2.3e-12 76.3 142 58.5
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 2.3e-12 76.3 122 54.9
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 2.9e-12 75.9 123 68.3
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 6.6e-12 74.7 145 62.1
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.1e-11 73.9 153 58.8
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.9e-11 73.2 127 65.4
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 1.9e-11 73.2 130 40.8
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 1.9e-11 73.2 141 58.9
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 3.3e-11 72.4 144 56.9
HPP92_017216 Vanilla planifolia HOM05D006719 ORTHO05D007063 3.3e-11 72.4 128 46.1
Nitab4.5_0005076g0040 Nicotiana tabacum HOM05D006719 ORTHO05D007063 5.6e-11 71.6 148 61.5
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 1.6e-10 70.1 147 57.1
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 1.6e-10 70.1 116 41.4
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 1.6e-10 70.1 116 41.4
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.8e-10 69.3 144 59.0
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 8.0e-10 67.8 130 59.2
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 1.4e-09 67.0 137 59.9
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 1.8e-09 66.6 147 57.1
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 2.3e-09 66.2 61 60.7
AUR62040366 Chenopodium quinoa HOM05D006719 ORTHO05D007063 4.0e-09 65.5 142 40.8
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 4.0e-09 65.5 150 54.0
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 4.0e-09 65.5 136 58.8
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 5.2e-09 65.1 153 53.6
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 5.2e-09 65.1 139 59.7
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 5.2e-09 65.1 143 59.4
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 6.8e-09 64.7 70 58.6
CAN.G129.20 Capsicum annuum HOM05D006719 ORTHO05D007063 8.9e-09 64.3 137 56.9
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 8.9e-09 64.3 140 60.0
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 2.0e-08 63.2 144 58.3
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 4.4e-08 62.0 146 56.8
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 7.5e-08 61.2 144 56.9
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 7.5e-08 61.2 148 54.7
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 7.5e-08 61.2 122 66.4
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 9.8e-08 60.8 141 57.4
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 1.3e-07 60.5 145 54.5
Cc03_g02020 Coffea canephora HOM05D006719 ORTHO05D007063 1.7e-07 60.1 53 60.4
BraA01t02080Z Brassica rapa HOM05D020768 ORTHO05D007063 3.7e-07 58.9 180 44.4
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 4.9e-07 58.5 143 51.7
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 4.9e-07 58.5 140 55.7
Eucgr.B01308 Eucalyptus grandis HOM05D006719 ORTHO05D007063 8.3e-07 57.8 119 60.5
Ah.04g153870 Amaranthus hybridus HOM05D006719 ORTHO05D007063 1.1e-06 57.4 102 65.7
Ah.13g074890 Amaranthus hybridus HOM05D006719 ORTHO05D007063 1.9e-06 56.6 45 66.7
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 4.1e-06 55.5 144 53.5


User provided reference genes

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