Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008385 Camellia sinensis var. sinensis HOM05D002087 ORTHO05D002101 6.6e-57 223.8 111 100.0
Rhsim02G0007900 Rhododendron simsii HOM05D002087 ORTHO05D002101 3.8e-12 75.1 95 47.4
vmacro15221 Vaccinium macrocarpon HOM05D002087 ORTHO05D002101 2.3e-09 65.9 64 54.7
TWI09G0245 Tripterygium wilfordii HOM05D002087 ORTHO05D002101 1.9e-08 62.8 90 38.9
Dinv29766 Davidia involucrata HOM05D002087 ORTHO05D002101 2.5e-08 62.4 94 40.4
Dinv44363 Davidia involucrata HOM05D002087 ORTHO05D002101 5.7e-08 61.2 94 42.6
QL06p009975 Quercus lobata HOM05D002087 ORTHO05D002101 1.7e-07 59.7 97 38.1
QL93p2007_0079 Quercus lobata HOM05D002087 ORTHO05D002101 1.7e-07 59.7 97 38.1
Glyma.09G043400 Glycine max HOM05D002087 ORTHO05D002101 2.8e-07 58.9 96 37.5
MD00G1127700 Malus domestica HOM05D002087 ORTHO05D002101 2.8e-07 58.9 93 38.7
Peaxi162Scf00140g01214 Petunia axillaris HOM05D002087 ORTHO05D002101 4.8e-07 58.2 107 34.6
PGSC0003DMG400017936 Solanum tuberosum HOM05D002087 ORTHO05D002101 6.3e-07 57.8 104 35.6
TAR362G1222 Trochodendron aralioides HOM05D002087 ORTHO05D002101 6.3e-07 57.8 95 40.0
COL.COLO4_13835 Corchorus olitorius HOM05D002087 ORTHO05D002101 8.2e-07 57.4 92 37.0
Solyc09g075210.3 Solanum lycopersicum HOM05D002087 ORTHO05D002101 8.2e-07 57.4 88 38.6
Cc01_g20970 Coffea canephora HOM05D002087 ORTHO05D002101 1.1e-06 57.0 99 37.4
MBI19_g43555_MAGBIO Magnolia biondii HOM05D002087 ORTHO05D002101 1.1e-06 57.0 97 34.0
MBI19_g46347_MAGBIO Magnolia biondii HOM05D002087 ORTHO05D002101 1.1e-06 57.0 97 34.0
Sabra10G0007800 Salix brachista HOM05D002087 ORTHO05D002101 1.1e-06 57.0 94 36.2
TAR633G2750 Trochodendron aralioides HOM05D002087 ORTHO05D002101 1.1e-06 57.0 96 40.6
Duzib151G0120 Durio zibethinus HOM05D002087 ORTHO05D002101 1.4e-06 56.6 87 40.2
FAN07G0698 Fragaria x ananassa HOM05D002087 ORTHO05D002101 1.4e-06 56.6 89 39.3
TWI73G0336 Tripterygium wilfordii HOM05D002087 ORTHO05D002101 1.4e-06 56.6 91 39.6
Ciclev10006308m.g Citrus clementina HOM05D002087 ORTHO05D002101 1.8e-06 56.2 90 38.9
Nitab4.5_0002820g0100 Nicotiana tabacum HOM05D002087 ORTHO05D002101 1.8e-06 56.2 94 35.1
CAN.G1989.1 Capsicum annuum HOM05D002087 ORTHO05D002101 2.4e-06 55.8 95 37.9
Dinv19683 Davidia involucrata HOM05D002087 ORTHO05D002101 2.4e-06 55.8 92 39.1
Nitab4.5_0004367g0080 Nicotiana tabacum HOM05D002087 ORTHO05D002101 2.4e-06 55.8 39 56.4
Peaxi162Scf00001g00412 Petunia axillaris HOM05D002087 ORTHO05D002101 2.4e-06 55.8 88 39.8
THA.LOC104820291 Tarenaya hassleriana HOM05D002087 ORTHO05D002101 2.4e-06 55.8 93 37.6
TAR365G0362 Trochodendron aralioides HOM05D002087 ORTHO05D002101 2.4e-06 55.8 39 59.0
Hma1.2p1_0078F.1_g040440 Hydrangea macrophylla HOM05D002087 ORTHO05D002101 3.1e-06 55.5 74 45.9
Peaxi162Scf00399g00518 Petunia axillaris HOM05D002087 ORTHO05D002101 3.1e-06 55.5 88 38.6
Ah.08g213310 Amaranthus hybridus HOM05D002087 ORTHO05D002101 4.1e-06 55.1 48 45.8
arahy.Tifrunner.gnm1.ann1.XU9PSJ Arachis hypogaea HOM05D002087 ORTHO05D002101 4.1e-06 55.1 58 43.1
AUR62008681 Chenopodium quinoa HOM05D002087 ORTHO05D002101 4.1e-06 55.1 44 52.3
AUR62025562 Chenopodium quinoa HOM05D002087 ORTHO05D002101 4.1e-06 55.1 44 52.3
Lj4g0021541 Lotus japonicus HOM05D002087 ORTHO05D002101 4.1e-06 55.1 86 37.2
Thecc.04G287100 Theobroma cacao HOM05D002087 ORTHO05D002101 4.1e-06 55.1 92 38.0
TAR365G0110 Trochodendron aralioides HOM05D002087 ORTHO05D002101 4.1e-06 55.1 94 37.2
Hund18179 Selenicereus undatus HOM05D002087 ORTHO05D002101 5.3e-06 54.7 84 38.1
Gohir.A10G165300 Gossypium hirsutum HOM05D002087 ORTHO05D002101 6.9e-06 54.3 52 44.2
Hma1.2p1_0494F.1_g165250 Hydrangea macrophylla HOM05D002087 ORTHO05D002101 6.9e-06 54.3 98 36.7
Lj1A23T85 Lonicera japonica HOM05D002087 ORTHO05D002101 6.9e-06 54.3 38 57.9
Rhsim13G0009300 Rhododendron simsii HOM05D002087 ORTHO05D002101 6.9e-06 54.3 95 37.9
Sc05g0003740 Simmondsia chinensis HOM05D002087 ORTHO05D002101 6.9e-06 54.3 33 63.6
TAR365G1114 Trochodendron aralioides HOM05D002087 ORTHO05D002101 6.9e-06 54.3 98 33.7
CAN.G1280.5 Capsicum annuum HOM05D002087 ORTHO05D002101 9.1e-06 53.9 90 37.8
CAN.G1989.10 Capsicum annuum HOM05D002087 ORTHO05D002101 9.1e-06 53.9 90 37.8
PGR031G1676 Punica granatum HOM05D002087 ORTHO05D002101 9.1e-06 53.9 95 34.7
PGSC0003DMG400031788 Solanum tuberosum HOM05D002087 ORTHO05D002101 9.1e-06 53.9 88 37.5


User provided reference genes

Program Settings