Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.9e-212 742.3 375 100.0
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.3e-208 729.6 375 98.1
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 6.3e-160 567.8 377 78.0
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.8e-159 566.2 378 78.0
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 2.6e-158 562.4 375 76.3
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 1.8e-151 539.7 303 87.8
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.8e-151 539.7 382 72.5
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.1e-151 538.9 377 71.4
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 7.0e-151 537.7 377 71.9
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 7.7e-150 534.3 381 70.6
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 1.0e-149 533.9 387 70.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 2.2e-149 532.7 383 71.8
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 6.5e-149 531.2 377 72.7
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 1.9e-148 529.6 384 72.1
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 2.5e-148 529.3 386 69.9
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 1.2e-147 526.9 378 72.5
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.2e-147 526.9 382 70.9
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 2.7e-147 525.8 375 71.2
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 8.0e-147 524.2 300 84.0
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.3e-146 522.7 382 70.2
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 3.0e-146 522.3 382 70.2
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 4.0e-146 521.9 375 70.4
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 2.0e-145 519.6 375 71.5
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.4e-145 518.8 305 80.7
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 7.5e-145 517.7 382 69.1
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.3e-144 516.9 385 70.4
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.7e-144 516.5 377 70.3
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 2.2e-144 516.2 378 69.0
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 2.2e-144 516.2 305 81.6
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 2.2e-144 516.2 331 77.3
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 2.8e-144 515.8 376 70.7
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 3.7e-144 515.4 375 72.8
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 4.8e-144 515.0 430 65.1
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 6.3e-144 514.6 293 83.3
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.1e-143 513.8 383 69.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 1.1e-143 513.8 293 83.3
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 1.1e-143 513.8 349 73.4
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 1.8e-143 513.1 295 83.4
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 2.4e-143 512.7 377 68.7
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 4.1e-143 511.9 298 82.6
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 7.0e-143 511.1 378 68.3
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 7.0e-143 511.1 381 69.0
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.6e-142 510.0 375 69.6
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.6e-142 510.0 380 69.5
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.6e-142 510.0 376 67.3
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 2.0e-142 509.6 379 69.1
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 3.5e-142 508.8 377 69.0
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.5e-142 508.8 298 82.2
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.5e-142 508.8 298 82.2
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 3.5e-142 508.8 379 68.6
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 4.5e-142 508.4 384 68.8
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.0e-141 507.3 352 72.4
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 1.0e-141 507.3 298 81.9
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.0e-141 507.3 305 78.7
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.3e-141 506.9 378 70.4
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.3e-141 506.9 354 72.3
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 2.9e-141 505.8 295 82.4
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 2.9e-141 505.8 379 67.5
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 2.9e-141 505.8 365 70.7
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.8e-141 505.4 376 69.7
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 3.8e-141 505.4 375 68.3
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 3.8e-141 505.4 388 69.8
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 6.6e-141 504.6 376 69.4
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.1e-140 503.8 344 70.3
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.9e-140 503.1 375 69.3
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 2.5e-140 502.7 357 71.4
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.5e-140 502.7 372 70.2
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 4.2e-140 501.9 310 78.1
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 5.5e-140 501.5 291 80.4
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 3.6e-139 498.8 378 68.3
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 4.7e-139 498.4 370 69.5
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 6.1e-139 498.0 342 71.1
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.0e-138 497.3 329 72.6
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.4e-138 496.9 349 71.6
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 5.2e-138 495.0 372 66.4
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.2e-137 493.8 306 75.5
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.2e-137 493.8 306 75.5
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 2.6e-137 492.7 342 70.2
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 2.6e-137 492.7 339 70.8
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 4.4e-137 491.9 309 77.3
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 4.4e-137 491.9 383 67.1
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 4.4e-137 491.9 374 67.1
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 7.5e-137 491.1 385 64.4
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 7.5e-137 491.1 384 66.7
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.7e-136 490.0 373 66.5
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 2.2e-136 489.6 301 77.1
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 3.1e-135 485.7 377 66.8
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 7.0e-135 484.6 431 61.7
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 4.5e-134 481.9 315 73.7
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 3.3e-132 475.7 282 81.9
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.3e-132 475.7 424 61.1
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 5.6e-132 474.9 390 63.6
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 1.2e-131 473.8 377 62.9
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 4.0e-130 468.8 354 63.6
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 3.2e-127 459.1 379 62.0
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 7.3e-124 448.0 341 66.3
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.1e-122 442.6 340 65.3
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 9.8e-121 437.6 291 69.8
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 3.7e-120 435.6 229 91.3
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.7e-120 435.6 308 66.9
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.3e-117 427.2 312 63.8
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.3e-117 427.2 344 59.9
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.3e-117 426.4 344 59.9
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.0e-117 426.0 291 68.4
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 5.1e-117 425.2 309 63.8
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 9.9e-105 384.4 377 57.8
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 6.9e-98 361.7 188 90.4
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 2.5e-92 343.2 292 57.9
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 9.6e-92 341.3 318 59.7
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 7.9e-86 321.6 279 62.4
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 6.2e-83 312.0 215 67.0
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.4e-82 310.8 264 64.0
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.8e-82 310.5 275 61.8
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 7.1e-79 298.5 272 61.8
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 3.7e-75 286.2 336 51.2
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 5.3e-74 282.3 185 73.5
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.7e-46 190.3 242 47.9
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 8.6e-24 115.5 151 50.3
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 1.9e-23 114.4 152 50.0
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 9.5e-23 112.1 94 59.6
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.9e-16 90.1 63 66.7
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 7.0e-10 69.3 38 78.9


User provided reference genes

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