Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.9e-72 275.8 143 100.0
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 2.6e-45 185.7 165 62.4
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 3.1e-43 178.7 182 57.1
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 1.2e-42 176.8 171 57.9
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 1.6e-42 176.4 177 57.1
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 5.5e-40 167.9 125 72.8
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 9.5e-40 167.2 167 54.5
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 9.5e-40 167.2 172 56.4
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 3.0e-38 162.2 171 55.6
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 3.0e-38 162.2 171 55.6
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 3.0e-38 162.2 171 53.2
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 4.0e-38 161.8 176 51.7
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 8.9e-38 160.6 167 52.1
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 2.6e-37 159.1 167 52.1
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 3.4e-37 158.7 170 53.5
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 4.4e-37 158.3 171 53.2
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 5.7e-37 157.9 171 51.5
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 8.3e-36 154.1 171 51.5
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 3.1e-35 152.1 170 51.8
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 5.4e-35 151.4 163 52.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 7.0e-35 151.0 170 51.8
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 1.2e-34 150.2 172 54.1
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 1.2e-34 150.2 183 51.4
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.6e-34 149.8 173 49.1
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 7.8e-34 147.5 171 50.9
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 2.3e-33 146.0 177 49.2
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 3.8e-33 145.2 174 50.6
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 3.8e-33 145.2 173 47.4
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 6.6e-33 144.4 173 49.7
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 8.6e-33 144.1 164 50.6
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 1.5e-32 143.3 183 47.0
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.5e-32 143.3 174 50.0
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 1.5e-32 143.3 157 51.0
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 5.6e-32 141.4 177 46.3
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 7.3e-32 141.0 165 51.5
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 1.2e-31 140.2 183 47.0
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.2e-31 140.2 164 49.4
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 1.6e-31 139.8 169 46.7
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 1.6e-31 139.8 171 49.7
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 3.6e-31 138.7 169 46.2
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 3.6e-31 138.7 174 48.9
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.0e-30 137.1 171 49.7
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 1.0e-30 137.1 163 49.1
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.0e-30 137.1 148 53.4
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.0e-30 137.1 148 53.4
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 1.8e-30 136.3 170 47.6
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 1.8e-30 136.3 173 45.7
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 4.0e-30 135.2 169 46.2
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 8.9e-30 134.0 165 46.7
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.5e-29 133.3 172 47.7
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 1.5e-29 133.3 171 46.2
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.6e-29 132.5 172 47.1
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 2.6e-29 132.5 176 43.8
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 3.4e-29 132.1 172 47.1
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.3e-28 130.2 161 50.3
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.7e-28 129.8 169 46.7
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 2.2e-28 129.4 172 47.1
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.2e-28 129.4 172 47.1
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.2e-28 129.4 173 43.9
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.9e-28 129.0 172 43.6
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 4.9e-28 128.3 173 43.4
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 4.9e-28 128.3 169 46.2
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 6.4e-28 127.9 173 47.4
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 6.4e-28 127.9 173 46.2
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.8e-27 126.3 177 44.6
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 2.4e-27 125.9 177 44.1
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 3.2e-27 125.6 162 49.4
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.1e-27 125.2 178 42.7
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 4.1e-27 125.2 178 42.7
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 5.4e-27 124.8 172 47.7
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.4e-27 124.8 172 45.9
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 9.2e-27 124.0 177 46.9
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 1.2e-26 123.6 169 45.6
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.2e-26 123.6 182 48.9
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.6e-26 123.2 172 44.8
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 2.7e-26 122.5 171 46.8
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 6.0e-26 121.3 172 44.8
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 7.8e-26 120.9 172 44.8
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.0e-25 120.6 181 45.9
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 1.3e-25 120.2 168 45.2
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 1.7e-25 119.8 163 46.0
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 2.3e-25 119.4 163 45.4
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 2.3e-25 119.4 177 42.4
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 5.0e-25 118.2 163 46.6
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 6.6e-25 117.9 163 46.0
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 8.6e-25 117.5 169 42.6
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 8.6e-25 117.5 180 43.3
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.5e-24 116.7 178 41.6
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.9e-24 116.3 166 43.4
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 1.9e-24 116.3 157 45.9
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.9e-24 116.3 172 44.2
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 1.9e-24 116.3 173 43.9
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 3.3e-24 115.5 168 42.9
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 4.3e-24 115.2 162 46.3
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 4.3e-24 115.2 171 43.3
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 1.2e-23 113.6 173 43.4
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 2.1e-23 112.8 166 42.8
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 2.8e-23 112.5 163 44.8
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 6.2e-23 111.3 109 59.6
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 8.0e-23 110.9 164 40.2
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 3.1e-22 109.0 165 39.4
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 4.0e-22 108.6 172 40.7
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 4.0e-22 108.6 171 41.5
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 4.0e-22 108.6 103 55.3
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 8.9e-22 107.5 165 40.0
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 8.9e-22 107.5 171 41.5
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 1.2e-21 107.1 163 39.3
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 1.5e-21 106.7 171 40.4
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 2.0e-21 106.3 172 41.9
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 3.4e-21 105.5 170 39.4
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 4.4e-21 105.1 175 44.0
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 4.9e-20 101.7 164 38.4
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.4e-19 100.1 166 39.2
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 1.9e-19 99.8 164 37.2
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.9e-19 99.8 164 37.2
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 1.9e-19 99.8 164 37.2
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 1.9e-19 99.8 164 37.2
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 2.4e-19 99.4 164 37.2
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 3.2e-19 99.0 179 40.8
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 4.1e-19 98.6 167 37.7
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 7.0e-19 97.8 171 38.6
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 2.3e-17 92.8 163 36.2
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 5.0e-17 91.7 165 37.0
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 5.0e-17 91.7 178 36.5
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 5.0e-17 91.7 165 37.0
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 5.0e-17 91.7 165 37.0
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 5.0e-17 91.7 178 36.5
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 3.6e-15 85.5 177 33.9
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.8e-14 83.2 103 43.7
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 3.0e-09 65.9 95 40.0
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 5.1e-09 65.1 168 30.4
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 1.6e-07 60.1 116 36.2
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 8.1e-07 57.8 163 28.8


User provided reference genes

Program Settings