Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 2.7e-153 545.4 303 100.0
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 7.6e-148 527.3 315 94.6
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 3.6e-113 412.1 317 72.9
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 2.7e-105 386.0 316 66.8
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 8.0e-105 384.4 313 70.9
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 2.0e-103 379.8 343 67.6
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 1.8e-96 356.7 308 65.6
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 4.9e-94 348.6 217 80.6
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 9.2e-93 344.4 233 75.1
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 1.6e-92 343.6 316 60.8
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 1.6e-92 343.6 314 60.5
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 1.6e-92 343.6 315 60.6
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 2.7e-92 342.8 314 60.8
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 4.5e-92 342.0 316 62.0
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 5.9e-92 341.7 318 59.4
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 7.8e-92 341.3 310 63.5
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 6.6e-91 338.2 300 69.0
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 8.6e-91 337.8 313 63.9
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 2.5e-90 336.3 316 58.9
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 2.5e-90 336.3 316 64.2
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 3.3e-90 335.9 315 61.6
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 7.3e-90 334.7 313 61.7
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 1.6e-89 333.6 311 60.8
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 2.8e-89 332.8 214 78.0
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 2.8e-89 332.8 221 75.6
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 2.8e-89 332.8 317 60.3
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 3.6e-89 332.4 313 60.1
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 6.1e-89 331.6 310 61.6
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 8.0e-89 331.3 314 63.1
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 1.4e-88 330.5 318 60.1
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 2.3e-88 329.7 317 60.9
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 3.0e-88 329.3 315 60.0
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 8.9e-88 327.8 313 63.3
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 5.7e-87 325.1 314 59.2
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 9.8e-87 324.3 252 67.5
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 1.3e-86 323.9 314 58.9
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 2.2e-86 323.2 230 73.0
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 2.2e-86 323.2 316 58.2
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 6.4e-86 321.6 218 75.2
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 6.4e-86 321.6 218 75.2
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 6.4e-86 321.6 218 75.2
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 6.4e-86 321.6 218 73.9
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 6.4e-86 321.6 314 59.6
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 8.3e-86 321.2 221 73.8
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 1.1e-85 320.9 304 60.5
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 1.4e-85 320.5 323 56.3
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.4e-85 319.7 218 74.8
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 4.1e-85 318.9 254 67.7
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 4.1e-85 318.9 215 73.5
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 5.4e-85 318.5 314 58.9
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 7.0e-85 318.2 238 68.5
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 1.2e-84 317.4 181 84.0
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 2.7e-84 316.2 212 74.1
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 7.8e-84 314.7 318 56.3
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 1.0e-83 314.3 212 73.6
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 1.0e-83 314.3 312 57.7
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 1.7e-83 313.5 309 56.3
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 2.3e-83 313.2 316 56.6
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 2.3e-83 313.2 217 71.0
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 3.0e-83 312.8 218 70.6
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 6.6e-83 311.6 216 70.4
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 8.6e-83 311.2 314 57.6
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 1.5e-82 310.5 217 71.4
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 5.6e-82 308.5 315 57.5
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 1.6e-81 307.0 309 55.7
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 2.8e-81 306.2 216 70.8
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 4.7e-81 305.4 214 72.4
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 8.0e-81 304.7 313 55.0
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 8.0e-81 304.7 309 55.3
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 1.1e-80 304.3 232 66.4
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 1.1e-80 304.3 215 69.3
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 1.1e-80 304.3 217 70.5
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 1.4e-80 303.9 311 55.3
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 2.3e-80 303.1 309 56.3
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 5.2e-80 302.0 314 55.4
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 6.8e-80 301.6 313 56.5
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 1.5e-79 300.4 216 69.0
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 2.6e-79 299.7 310 54.8
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 3.4e-79 299.3 216 69.0
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 4.4e-79 298.9 217 68.7
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 4.4e-79 298.9 218 72.0
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 9.8e-79 297.7 225 68.0
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 9.8e-79 297.7 217 69.1
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 1.3e-78 297.4 314 54.8
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 1.3e-78 297.4 212 70.3
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 1.3e-78 297.4 288 59.4
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 1.3e-78 297.4 237 65.0
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 1.3e-78 297.4 317 53.6
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 2.2e-78 296.6 226 66.4
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 2.9e-78 296.2 214 70.1
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 3.7e-78 295.8 315 55.6
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 3.7e-78 295.8 315 55.6
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 4.9e-78 295.4 212 69.8
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 4.9e-78 295.4 313 55.3
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 6.4e-78 295.0 224 62.9
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 1.1e-77 294.3 220 68.6
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 1.4e-77 293.9 216 69.4
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 1.9e-77 293.5 328 52.4
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 2.4e-77 293.1 211 69.7
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 1.6e-76 290.4 246 61.4
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 1.6e-76 290.4 230 65.7
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 4.6e-76 288.9 210 69.5
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 2.3e-75 286.6 179 76.0
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 1.5e-74 283.9 303 53.5
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 3.3e-74 282.7 234 61.1
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 9.5e-74 281.2 237 59.5
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 4.7e-73 278.9 223 63.7
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 1.8e-72 276.9 294 55.4
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.7e-67 260.4 200 65.5
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 1.5e-66 257.3 226 61.1
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 1.2e-65 254.2 213 60.1
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 6.2e-65 251.9 283 54.1
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 7.8e-60 235.0 225 51.1
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 1.7e-59 233.8 168 70.2
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 1.2e-57 227.6 238 50.4
Thecc.09G074000 Theobroma cacao HOM05D005557 ORTHO05D006748 2.8e-57 226.5 238 57.6
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 4.2e-53 212.6 232 48.3
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 2.1e-52 210.3 174 63.8
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 1.9e-50 203.8 176 62.5
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 3.2e-45 186.4 157 56.7
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 2.7e-44 183.3 109 79.8
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 3.0e-43 179.9 144 61.8
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 1.8e-35 154.1 132 56.1
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 3.3e-34 149.8 83 81.9
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 4.3e-34 149.4 83 81.9
PSO724G0807 Papaver somniferum HOM05D005557 ORTHO05D006748 5.5e-29 132.5 265 40.0
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea HOM05D005557 ORTHO05D006748 6.0e-28 129.0 68 85.3
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 1.3e-27 127.9 83 71.1
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 1.8e-27 127.5 179 39.7
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 1.6e-25 120.9 150 38.0
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea HOM05D005557 ORTHO05D006748 2.4e-24 117.1 128 53.1
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 5.9e-23 112.5 199 33.2
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis HOM05D005557 ORTHO05D006748 2.7e-20 103.6 125 47.2
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea HOM05D005557 ORTHO05D006748 2.4e-16 90.5 53 77.4
arahy.Tifrunner.gnm1.ann1.HVCV5S Arachis hypogaea HOM05D004618 ORTHO05D005318 3.6e-12 76.6 83 50.6
arahy.Tifrunner.gnm1.ann1.B62L7G Arachis hypogaea HOM05D000992 ORTHO05D001928 1.8e-08 64.3 31 87.1
arahy.Tifrunner.gnm1.ann1.KDZ9D9 Arachis hypogaea HOM05D005557 ORTHO05D001928 4.5e-07 59.7 28 89.3
Nn1g06537 Nelumbo nucifera HOM05D005557 ORTHO05D006748 1.7e-06 57.8 153 35.3


User provided reference genes

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