Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 4.0e-134 481.5 252 100.0
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 4.5e-61 238.8 203 63.5
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 1.9e-59 233.4 197 62.9
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 2.1e-58 229.9 204 59.8
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 8.5e-52 208.0 213 58.2
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 8.3e-47 191.4 205 52.2
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 7.0e-46 188.3 198 51.0
MD00G1110200 Malus domestica HOM05D008129 ORTHO05D010232 2.9e-44 183.0 219 46.1
Thecc.03G273100 Theobroma cacao HOM05D008129 ORTHO05D010232 2.9e-44 183.0 213 51.6
Cfa012120 Carpinus fangiana HOM05D008129 ORTHO05D010232 3.2e-43 179.5 199 50.8
MD04G1064800 Malus domestica HOM05D008129 ORTHO05D010232 3.2e-43 179.5 185 50.3
RcHm_v2.0_Chr7g0198961 Rosa chinensis HOM05D008129 ORTHO05D010232 7.2e-43 178.3 217 46.5
Haze_08930 Corylus avellana HOM05D008129 ORTHO05D010232 2.7e-42 176.4 199 50.3
FvH4_5g01760 Fragaria vesca HOM05D008129 ORTHO05D010232 8.0e-42 174.9 217 47.0
FAN18G4443 Fragaria x ananassa HOM05D008129 ORTHO05D010232 8.0e-42 174.9 217 47.0
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 2.3e-41 173.3 215 44.7
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 3.0e-41 172.9 199 50.3
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 4.0e-41 172.6 218 45.9
Sabra01G0081800 Salix brachista HOM05D008129 ORTHO05D010232 1.2e-40 171.0 193 49.7
FAN08G0538 Fragaria x ananassa HOM05D008129 ORTHO05D010232 2.0e-40 170.2 217 46.1
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 2.0e-40 170.2 200 47.5
Ciclev10022388m.g Citrus clementina HOM05D008129 ORTHO05D010232 2.6e-40 169.9 164 54.9
CiPaw.11G139400 Carya illinoinensis HOM05D008129 ORTHO05D010232 1.3e-39 167.5 192 49.0
FAN13G1875 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.3e-39 167.5 202 48.0
CiPaw.12G097000 Carya illinoinensis HOM05D008129 ORTHO05D010232 2.2e-39 166.8 192 50.0
Gohir.D03G153100 Gossypium hirsutum HOM05D008129 ORTHO05D010232 2.2e-39 166.8 199 48.7
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 2.2e-39 166.8 198 48.0
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 2.8e-39 166.4 203 47.8
QL12p017610 Quercus lobata HOM05D008129 ORTHO05D010232 4.8e-39 165.6 197 48.7
Manes.01G065300 Manihot esculenta HOM05D008129 ORTHO05D010232 6.3e-39 165.2 192 47.4
QL12p017600 Quercus lobata HOM05D008129 ORTHO05D010232 1.1e-38 164.5 198 48.5
FAN04G1130 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.8e-38 163.7 212 46.7
Gohir.A03G018500 Gossypium hirsutum HOM05D008129 ORTHO05D010232 9.1e-38 161.4 199 47.7
Potri.001G108300 Populus trichocarpa HOM05D008129 ORTHO05D010232 5.9e-37 158.7 193 46.6
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 7.7e-37 158.3 204 44.6
Gorai.003G160700 Gossypium raimondii HOM05D008129 ORTHO05D010232 7.7e-37 158.3 165 53.3
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 2.8e-34 149.8 197 47.7
Migut.E01284 Erythranthe guttata HOM05D008129 ORTHO05D010232 1.8e-33 147.1 166 48.2
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 6.8e-33 145.2 198 42.9
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 2.8e-31 139.8 201 42.8
Nn6g34205 Nelumbo nucifera HOM05D008129 ORTHO05D010232 2.4e-30 136.7 206 41.3
SGA_v2.0_scaffold385G50459 Striga asiatica HOM05D008129 ORTHO05D010232 1.7e-28 130.6 135 47.4
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 1.1e-27 127.9 198 38.9
TAR375G1113 Trochodendron aralioides HOM05D008129 ORTHO05D010232 2.8e-26 123.2 135 48.1
vmacro00355 Vaccinium macrocarpon HOM05D001075 ORTHO05D001779 4.4e-24 115.9 106 60.4
Lalb_Chr09g0333221 Lupinus albus HOM05D008129 ORTHO05D010232 1.6e-21 107.5 199 35.2
Glyma.11G025800 Glycine max HOM05D008129 ORTHO05D010232 2.7e-21 106.7 193 40.4
Eucgr.E00553 Eucalyptus grandis HOM05D008129 ORTHO05D010232 1.7e-20 104.0 172 40.1
Medtr8g096860 Medicago truncatula HOM05D008129 ORTHO05D010232 1.5e-19 100.9 195 35.9
MELO3C005638.2 Cucumis melo HOM05D008129 ORTHO05D010232 2.8e-18 96.7 196 36.7
CsaV3_5G003170 Cucumis sativus L. HOM05D008129 ORTHO05D010232 4.7e-18 95.9 199 35.7
Dinv37674 Davidia involucrata HOM05D008129 ORTHO05D010232 8.0e-18 95.1 56 80.4
Eucgr.D01909 Eucalyptus grandis HOM05D008129 ORTHO05D010232 8.0e-18 95.1 142 40.1
TPR.G12796 Trifolium pratense HOM05D000268 ORTHO05D000261 1.1e-17 94.7 192 34.9
Psat7g036080 Pisum sativum HOM05D008129 ORTHO05D010232 6.8e-17 92.0 194 35.1
VMungo1215G1765 Vigna mungo HOM05D008129 ORTHO05D010232 8.9e-17 91.7 193 35.8
Thecc.03G273000 Theobroma cacao HOM05D008129 ORTHO05D010232 1.5e-16 90.9 173 39.9
Zm00001eb269500 Zea mays HOM05D041313 ORTHO05D010232 7.5e-16 88.6 218 32.6
Oeu062744.1 Olea europaea HOM05D008129 ORTHO05D010232 3.7e-15 86.3 86 52.3
Lj2g0000650 Lotus japonicus HOM05D008129 ORTHO05D010232 8.3e-15 85.1 125 43.2
Os06g0128800 Oryza sativa ssp. japonica HOM05D041313 ORTHO05D010232 8.3e-15 85.1 184 33.7
Gorai.003G160800 Gossypium raimondii HOM05D008129 ORTHO05D010232 5.4e-14 82.4 163 37.4
Phvul.002G155100 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 7.1e-14 82.0 193 33.2
COL.COLO4_05254 Corchorus olitorius HOM05D008129 ORTHO05D010232 9.2e-14 81.6 196 32.7
Gohir.D03G153200 Gossypium hirsutum HOM05D008129 ORTHO05D010232 1.6e-13 80.9 163 36.8
AUR62017276 Chenopodium quinoa HOM05D008129 ORTHO05D010232 3.5e-13 79.7 88 47.7
Lsat_1_v5_gn_3_8420 Lactuca sativa HOM05D008129 ORTHO05D010232 5.1e-12 75.9 85 49.4
Gohir.A03G018400 Gossypium hirsutum HOM05D008129 ORTHO05D010232 8.6e-12 75.1 86 47.7
CAN.G981.9 Capsicum annuum HOM05D008129 ORTHO05D010232 1.5e-11 74.3 81 48.1
Sopen08g028850 Solanum pennellii HOM05D008129 ORTHO05D010232 3.3e-11 73.2 77 50.6
Phvul.002G286400 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 9.5e-11 71.6 130 32.3
SEGI_31534 Sequoiadendron giganteum HOM05D001109 ORTHO05D002124 8.1e-10 68.6 95 37.9
Aqoxy7G00401 Aquilegia oxysepala HOM05D002113 ORTHO05D002124 3.1e-09 66.6 224 27.2
THA.LOC104817276 Tarenaya hassleriana HOM05D002113 ORTHO05D002124 4.0e-09 66.2 208 26.9
TWI36G0990 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 7.6e-08 62.0 116 29.3
Hma1.2p1_0033F.1_g020480 Hydrangea macrophylla HOM05D002113 ORTHO05D002124 3.7e-07 59.7 136 30.1
Atru.chr5.424 Acer truncatum HOM05D002113 ORTHO05D002124 4.9e-07 59.3 180 26.7
Oeu058608.1 Olea europaea HOM05D002113 ORTHO05D002124 4.9e-07 59.3 134 31.3
Potri.014G078700 Populus trichocarpa HOM05D002113 ORTHO05D002124 6.4e-07 58.9 132 31.8
ECA240G0265 Erigeron canadensis HOM05D002113 ORTHO05D002124 8.3e-07 58.5 99 33.3
Cfa009470 Carpinus fangiana HOM05D000865 ORTHO05D000739 1.4e-06 57.8 98 32.7
Gohir.D12G108400 Gossypium hirsutum HOM05D002113 ORTHO05D002124 1.4e-06 57.8 97 33.0
ClCG05G001780 Citrullus lanatus HOM05D002113 ORTHO05D002124 1.9e-06 57.4 97 32.0
A09p00430 Brassica napus HOM05D002113 ORTHO05D002124 2.4e-06 57.0 105 31.4
BraA09t35717Z Brassica rapa HOM05D002113 ORTHO05D002124 2.4e-06 57.0 105 31.4
Sp5g02180 Schrenkiella parvula HOM05D002113 ORTHO05D002124 2.4e-06 57.0 94 34.0
Sabra02G0123200 Salix brachista HOM05D002113 ORTHO05D002124 3.2e-06 56.6 132 28.8
Sed0006885 Sechium edule HOM05D002113 ORTHO05D002124 5.4e-06 55.8 96 35.4
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 9.2e-06 55.1 99 31.3
Mapoly0163s0014 Marchantia polymorpha HOM05D001109 ORTHO05D000739 9.2e-06 55.1 122 27.0
Potri.002G155300 Populus trichocarpa HOM05D002113 ORTHO05D002124 9.2e-06 55.1 148 28.4


User provided reference genes

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