Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.6e-66 254.2 135 100.0
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.3e-62 240.4 133 95.5
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.0e-59 233.4 135 91.9
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-59 232.6 131 94.7
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.9e-59 231.5 135 91.9
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.5e-58 228.8 134 91.0
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.2e-57 224.2 135 88.1
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.9e-54 215.3 135 87.4
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.7e-54 214.9 135 87.4
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-50 203.4 135 84.4
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 8.4e-14 80.9 94 52.1
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 1.9e-13 79.7 112 37.5
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 7.1e-13 77.8 102 41.2
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.2e-12 77.0 109 43.1
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 3.5e-12 75.5 104 44.2
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 4.6e-12 75.1 109 41.3
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 1.8e-11 73.2 94 44.7
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.3e-11 72.8 77 49.4
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 3.9e-11 72.0 113 38.1
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-10 70.1 99 42.4
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 1.9e-10 69.7 93 40.9
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.5e-10 69.3 97 38.1
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 3.3e-10 68.9 110 40.9
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.3e-10 68.6 73 49.3
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.3e-10 68.6 128 37.5
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 7.4e-10 67.8 80 45.0
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 7.4e-10 67.8 110 40.0
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 9.6e-10 67.4 103 35.0
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 9.6e-10 67.4 98 43.9
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.3e-09 67.0 102 39.2
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.6e-09 66.6 102 39.2
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.1e-09 66.2 75 49.3
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 2.8e-09 65.9 113 34.5
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 2.8e-09 65.9 94 42.6
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 2.8e-09 65.9 93 37.6
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 3.7e-09 65.5 99 39.4
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.1e-08 63.9 97 38.1
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.8e-08 63.2 98 37.8
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.8e-08 63.2 119 37.8
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.4e-08 62.8 79 43.0
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.4e-08 62.8 114 38.6
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 5.3e-08 61.6 103 38.8
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.3e-08 61.6 127 33.9
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.3e-08 61.6 127 33.9
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.3e-08 61.6 113 37.2
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 6.9e-08 61.2 107 36.4
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.9e-08 61.2 120 36.7
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.9e-08 61.2 125 35.2
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 9.0e-08 60.8 97 39.2
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 9.0e-08 60.8 98 33.7
RhsimUnG0216000 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.0e-08 60.8 124 39.5
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.5e-07 60.1 117 35.0
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 1.5e-07 60.1 98 35.7
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 4.5e-07 58.5 117 35.0
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 7.6e-07 57.8 112 35.7
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 7.6e-07 57.8 75 44.0
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 7.6e-07 57.8 93 37.6
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 1.0e-06 57.4 104 37.5
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.3e-06 57.0 97 36.1
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 1.7e-06 56.6 85 37.6
Atru.chr4.1346 Acer truncatum HOM05D058995 ORTHO05D010043 2.2e-06 56.2 102 35.3
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 2.2e-06 56.2 98 32.7
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.9e-06 55.1 97 35.1
Ciclev10022666m.g Citrus clementina HOM05D017113 ORTHO05D019028 6.5e-06 54.7 110 36.4
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 8.4e-06 54.3 90 36.7


User provided reference genes

Program Settings