Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 3.3e-256 887.9 447 100.0
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 3.6e-178 628.6 480 73.1
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 3.1e-121 439.5 474 56.3
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 1.1e-94 351.3 473 48.6
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 1.4e-86 324.3 434 48.4
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 1.7e-71 274.2 457 41.4
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 1.1e-70 271.6 615 35.6
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 7.7e-64 248.8 440 37.3
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 5.0e-55 219.5 456 37.3
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 1.9e-54 217.6 457 37.0
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 6.1e-53 212.6 449 36.1
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 2.3e-52 210.7 475 35.4
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 6.3e-50 202.6 451 34.8
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 2.5e-46 190.7 430 34.4
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 6.8e-44 182.6 472 33.3
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 1.5e-43 181.4 464 32.5
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 3.4e-43 180.3 463 32.6
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.3e-42 178.3 454 33.0
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 3.7e-42 176.8 488 32.6
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 3.7e-42 176.8 465 32.9
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 1.4e-41 174.9 226 49.1
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 5.4e-41 172.9 327 39.1
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.7e-40 170.6 448 32.1
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 1.3e-39 168.3 460 34.8
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 1.7e-39 167.9 449 34.3
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 8.6e-39 165.6 435 32.0
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 1.9e-38 164.5 455 31.4
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 2.8e-37 160.6 477 30.4
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 3.6e-37 160.2 451 33.3
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 8.1e-37 159.1 459 32.7
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 6.8e-36 156.0 453 31.1
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 1.2e-35 155.2 447 32.7
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 1.5e-35 154.8 462 31.4
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 5.8e-35 152.9 440 31.1
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 9.8e-35 152.1 453 32.9
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 9.8e-35 152.1 453 32.9
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 9.8e-35 152.1 462 32.3
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 1.3e-34 151.8 455 32.7
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 1.1e-33 148.7 478 30.8
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 2.4e-33 147.5 392 32.9
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 9.2e-33 145.6 440 30.2
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 9.2e-33 145.6 454 30.0
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 7.8e-32 142.5 466 30.5
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 1.3e-31 141.7 449 30.7
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 3.9e-31 140.2 441 30.2
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 6.6e-31 139.4 339 36.0
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 8.6e-31 139.0 450 31.3
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 9.5e-30 135.6 448 31.2
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 3.6e-29 133.7 450 28.4
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 4.7e-29 133.3 434 31.8
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 1.1e-28 132.1 491 29.3
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 3.1e-28 130.6 460 28.3
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 6.8e-28 129.4 460 28.7
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 2.0e-27 127.9 443 31.6
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 9.9e-27 125.6 462 31.0
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 9.9e-27 125.6 328 32.9
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 4.9e-26 123.2 448 30.8
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 6.4e-26 122.9 454 30.4
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 8.3e-26 122.5 447 29.8
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 9.2e-25 119.0 529 27.2
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 2.1e-24 117.9 454 28.2
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 6.0e-24 116.3 456 28.9
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 7.8e-24 115.9 453 29.6
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 7.8e-24 115.9 437 29.5
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 1.0e-23 115.5 421 27.3
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.3e-23 115.2 331 29.9
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 3.0e-23 114.0 521 28.4
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 5.1e-23 113.2 443 29.8
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 8.6e-23 112.5 495 25.7
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 3.3e-22 110.5 522 27.6
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 9.6e-22 109.0 451 27.9
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 3.6e-21 107.1 340 32.1
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.8e-20 104.8 326 31.3
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 8.9e-20 102.4 447 26.8
Actinidia10850 Actinidia chinensis HOM05D007047 ORTHO05D009177 2.6e-19 100.9 126 47.6
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 4.4e-19 100.1 261 33.0
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 5.8e-19 99.8 325 27.4
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 1.3e-18 98.6 222 34.2
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 2.2e-18 97.8 442 26.2
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 4.9e-18 96.7 457 26.7
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 2.1e-16 91.3 420 29.8
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 2.1e-16 91.3 431 26.7
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 2.1e-16 91.3 482 25.9
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 6.0e-16 89.7 461 25.8
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 1.3e-15 88.6 495 26.7
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 3.9e-15 87.0 430 28.1
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 6.6e-15 86.3 496 24.4
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 6.6e-15 86.3 333 30.6
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 6.6e-15 86.3 181 39.2
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 1.1e-14 85.5 433 26.3
Cpa.g.sc89.13 Carica papaya HOM05D007047 ORTHO05D009177 1.5e-14 85.1 171 33.9
FAN18G3895 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.3e-14 84.0 361 26.3
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 2.1e-13 81.3 493 24.3
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 5.3e-12 76.6 427 23.9
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 6.4e-10 69.7 117 36.8
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 5.4e-09 66.6 441 25.4
Ciclev10023353m.g Citrus clementina HOM05D007047 ORTHO05D009177 2.7e-08 64.3 101 38.6
Sc07g0009150 Simmondsia chinensis HOM05D007047 ORTHO05D009177 7.9e-08 62.8 348 27.0
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 2.3e-07 61.2 210 28.6
Cpa.g.sc1463.1 Carica papaya HOM05D007047 ORTHO05D009177 8.7e-07 59.3 119 37.0
HanXRQChr11g0329491 Helianthus annuus HOM05D007047 ORTHO05D009177 8.7e-07 59.3 67 43.3
FvH4_5g19900 Fragaria vesca HOM05D007047 ORTHO05D009177 1.1e-06 58.9 111 34.2
Psat2g156960 Pisum sativum HOM05D007047 ORTHO05D009177 1.1e-06 58.9 170 32.4
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 3.3e-06 57.4 246 25.6
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 5.6e-06 56.6 170 29.4


User provided reference genes

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