Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 5.7e-99 364.4 201 100.0
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 4.7e-61 238.4 205 69.8
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 3.5e-56 222.2 208 67.8
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 3.5e-56 222.2 208 67.8
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.6e-53 213.4 204 68.6
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.0e-52 210.7 204 63.7
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.3e-50 203.8 205 62.4
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 4.9e-50 201.8 210 65.7
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 8.3e-50 201.1 203 65.5
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 8.3e-50 201.1 207 65.7
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.0e-48 196.4 203 61.6
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 3.9e-47 192.2 205 60.0
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 8.6e-47 191.0 206 58.7
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 1.1e-46 190.7 206 62.6
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.5e-46 190.3 204 60.8
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.9e-46 189.9 207 58.9
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.9e-46 189.9 204 61.8
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.5e-46 189.5 202 59.9
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 4.3e-46 188.7 203 56.7
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 5.6e-46 188.3 166 66.9
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 2.8e-45 186.0 199 59.8
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 4.7e-45 185.3 205 58.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 5.2e-44 181.8 203 57.1
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 5.8e-43 178.3 204 55.9
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.9e-42 176.0 204 56.9
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 3.7e-42 175.6 224 54.5
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 4.1e-41 172.2 210 55.2
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 2.1e-40 169.9 204 57.4
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 7.8e-40 167.9 202 56.9
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 7.8e-40 167.9 211 53.6
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 7.8e-40 167.9 215 56.7
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.3e-39 167.2 206 59.7
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 2.3e-39 166.4 206 60.2
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 3.9e-39 165.6 213 55.9
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 5.1e-39 165.2 228 51.8
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 8.6e-39 164.5 205 54.6
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.1e-38 164.1 207 55.1
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.9e-38 163.3 210 58.6
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.9e-38 163.3 203 57.1
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 2.5e-38 162.9 206 51.9
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 3.3e-38 162.5 210 58.6
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 4.3e-38 162.2 216 53.7
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.3e-38 161.4 210 57.1
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 2.1e-37 159.8 206 53.4
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 2.1e-37 159.8 208 59.1
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.7e-37 158.7 200 56.5
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.4e-36 157.1 204 53.4
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.8e-36 156.8 208 60.1
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 3.1e-36 156.0 218 55.5
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 4.0e-36 155.6 207 56.0
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 2.0e-35 153.3 207 53.6
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 9.9e-35 151.0 204 51.0
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.7e-34 150.2 205 51.2
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 2.2e-34 149.8 196 59.2
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 2.9e-34 149.4 208 51.4
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 8.3e-34 147.9 207 54.1
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 8.3e-34 147.9 211 49.3
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 8.3e-34 147.9 204 48.5
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.1e-33 147.5 202 52.0
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 2.4e-33 146.4 208 57.2
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.4e-33 146.4 210 54.3
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 3.2e-33 146.0 213 54.9
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 4.6e-32 142.1 214 50.0
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 6.0e-32 141.7 210 53.8
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 6.0e-32 141.7 152 57.9
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 7.8e-32 141.4 156 60.3
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 7.8e-32 141.4 203 48.3
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.0e-31 141.0 199 56.8
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 1.3e-31 140.6 204 54.9
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.7e-31 140.2 211 53.1
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 2.3e-31 139.8 210 52.9
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 2.3e-31 139.8 137 62.0
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 3.0e-31 139.4 202 49.0
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 5.1e-31 138.7 203 49.3
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.1e-30 137.5 216 45.4
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.5e-30 137.1 204 51.0
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.9e-30 136.7 227 53.7
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 3.3e-30 136.0 210 52.4
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.3e-30 135.6 200 53.5
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 7.3e-30 134.8 210 48.1
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 1.2e-29 134.0 213 46.5
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 1.2e-29 134.0 217 53.5
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-29 134.0 218 53.2
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.8e-29 132.9 212 52.8
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.7e-29 132.1 219 52.5
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.7e-29 132.1 228 51.3
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 8.1e-29 131.3 216 50.0
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 1.8e-28 130.2 206 49.0
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.2e-28 128.6 211 51.2
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 6.8e-28 128.3 179 53.1
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 8.9e-28 127.9 211 44.1
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 8.9e-28 127.9 204 47.1
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.2e-27 127.5 212 47.2
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.2e-27 127.5 210 51.9
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.5e-27 127.1 209 43.5
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 1.5e-27 127.1 209 43.5
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 1.5e-27 127.1 209 43.5
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 2.6e-27 126.3 210 44.3
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 4.4e-27 125.6 216 43.5
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 5.8e-27 125.2 214 49.5
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 9.9e-27 124.4 209 43.1
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.3e-26 124.0 210 43.8
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.3e-26 124.0 210 43.8
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 2.2e-26 123.2 214 42.1
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 2.2e-26 123.2 210 47.1
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 6.4e-26 121.7 175 56.0
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-25 120.9 210 43.3
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 1.1e-25 120.9 210 43.3
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.1e-25 120.9 211 42.7
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-25 120.6 207 40.6
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 1.4e-25 120.6 214 48.6
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.9e-25 120.2 138 55.8
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 2.4e-25 119.8 151 51.0
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 3.2e-25 119.4 200 46.5
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 4.2e-25 119.0 181 47.5
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 7.1e-25 118.2 208 44.2
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 1.6e-24 117.1 219 48.4
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 3.5e-24 115.9 206 41.7
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 4.6e-24 115.5 209 40.2
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 7.8e-24 114.8 209 39.7
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 1.7e-23 113.6 209 39.7
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 6.6e-23 111.7 209 41.1
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 8.7e-23 111.3 216 47.2
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 2.5e-22 109.8 146 50.0
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 2.5e-22 109.8 108 62.0
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 3.3e-22 109.4 212 46.2
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 2.1e-21 106.7 209 41.1
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 3.6e-21 105.9 137 46.7
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 6.2e-21 105.1 213 47.4
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 6.2e-21 105.1 194 45.9
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 2.4e-20 103.2 169 42.0
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 4.0e-20 102.4 202 41.6
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 6.9e-20 101.7 169 42.0
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 1.2e-19 100.9 176 50.6
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.0e-19 100.1 147 46.9
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 2.0e-19 100.1 168 41.7
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 5.8e-19 98.6 211 47.9
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 5.8e-19 98.6 163 48.5
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 5.8e-19 98.6 92 64.1
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 2.9e-18 96.3 169 40.2
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 2.9e-18 96.3 199 39.7
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 4.9e-18 95.5 130 53.8
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.1e-17 94.4 151 43.7
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.9e-17 93.6 202 42.1
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 4.2e-17 92.4 207 36.7
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 1.2e-16 90.9 184 39.1
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 1.2e-16 90.9 203 41.9
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.6e-16 90.5 208 38.5
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 7.8e-16 88.2 186 38.2
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 7.8e-16 88.2 186 38.2
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 7.8e-16 88.2 177 36.7
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 1.7e-15 87.0 128 55.5
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 3.0e-15 86.3 213 40.4
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 3.0e-15 86.3 192 35.4
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 1.5e-14 84.0 170 42.9
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 5.6e-14 82.0 214 34.1
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.6e-13 80.5 171 33.9
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 1.4e-12 77.4 114 49.1
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 3.1e-12 76.3 206 35.9
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 9.0e-12 74.7 209 37.8
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 9.0e-12 74.7 220 35.0
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 3.4e-11 72.8 218 32.6
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 3.4e-11 72.8 213 35.2
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 7.6e-11 71.6 125 44.0
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 7.6e-11 71.6 110 48.2
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 1.7e-10 70.5 175 37.7
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 4.9e-10 68.9 135 42.2
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 2.4e-09 66.6 200 37.0
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 5.4e-09 65.5 166 37.3
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 2.1e-08 63.5 170 37.1
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 2.7e-08 63.2 211 34.1
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 1.3e-07 60.8 180 30.6
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 2.3e-07 60.1 126 36.5
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 3.0e-07 59.7 182 32.4
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 3.3e-06 56.2 52 57.7
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 9.6e-06 54.7 65 46.2


User provided reference genes

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