Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008224 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D043286 3.6e-45 184.5 89 100.0
CSS0005186 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D043286 2.6e-40 168.3 89 91.0
CSS0016554 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-13 79.0 81 53.1
CSS0010759 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.1e-13 77.4 82 51.2
CSS0008242 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-12 76.6 80 50.0
CSS0044276 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.9e-12 73.6 82 48.8
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-11 72.0 80 51.2
CSS0025625 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D000004 5.7e-11 70.9 88 45.5
CSS0006009 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.5e-11 70.5 72 54.2
CSS0020053 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-10 69.7 80 50.0
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-10 67.0 80 47.5
CSS0030187 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-09 66.2 77 46.8
CSS0004052 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-09 65.5 82 48.8
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-09 63.9 81 34.6
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-09 63.9 81 34.6
QL11p030734 Quercus lobata HOM05D000969 ORTHO05D000899 9.2e-09 63.5 81 34.6
MBI01_g09963_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.6e-08 62.8 80 41.2
TAR549G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.7e-08 62.0 79 41.8
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 3.5e-08 61.6 81 33.3
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-08 61.2 80 46.2
MBI17_g31746_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.8e-08 60.5 79 40.5
QL01p048324 Quercus lobata HOM05D002615 ORTHO05D002913 7.8e-08 60.5 81 33.3
Aqoxy1G02903 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.0e-07 60.1 79 38.0
Aqoxy1G01793 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.3e-07 58.9 81 35.8
PGSC0003DMG400015955 Solanum tuberosum HOM05D000003 ORTHO05D000006 2.3e-07 58.9 79 35.4
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.9e-07 58.2 81 35.8
QL10p002852 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-07 58.2 81 32.1
Aqoxy4G01286 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.6e-07 57.4 69 44.9
QL08p022680 Quercus lobata HOM05D000458 ORTHO05D004796 6.6e-07 57.4 79 34.2
QL04p042086 Quercus lobata HOM05D000003 ORTHO05D000006 8.6e-07 57.0 79 35.4
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 78 39.7
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 56.6 79 34.2
TAR640G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.1e-06 56.6 81 37.0
Aqoxy4G00279 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 56.2 79 36.7
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 56.2 79 36.7
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 55.8 78 35.9
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 1.9e-06 55.8 79 34.2
QL04p090352 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 55.8 82 31.7
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 1.9e-06 55.8 79 34.2
Aqoxy3G01815 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.5e-06 55.5 81 34.6
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 2.5e-06 55.5 80 33.8
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 2.5e-06 55.5 80 33.8
Aqoxy2G00968 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.3e-06 55.1 70 41.4
PSO063G1566 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 55.1 75 33.3
TWI77G0755 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.3e-06 55.1 69 40.6
Aqoxy7G01789 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.3e-06 54.7 82 39.0
CSS0030423 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-06 54.7 77 42.9
MBI09_g13294_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.3e-06 54.7 76 38.2
Atru.chr3.1893 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 77 39.0
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 5.6e-06 54.3 79 34.2
MBI01_g19331_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.3e-06 53.9 77 40.3
MBI01_g26130_MAGBIO Magnolia biondii HOM05D023622 ORTHO05D000004 7.3e-06 53.9 61 52.5
PSO731G0096 Papaver somniferum HOM05D000003 ORTHO05D000006 9.5e-06 53.5 80 32.5
PGSC0003DMG400032795 Solanum tuberosum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 78 32.1


User provided reference genes

Program Settings