Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008212 Camellia sinensis var. sinensis HOM05D003516 ORTHO05D004068 3.6e-70 268.1 132 100.0
CSS0008989 Camellia sinensis var. sinensis HOM05D003516 ORTHO05D004068 5.6e-47 191.0 132 69.7
Dinv11492 Davidia involucrata HOM05D003516 ORTHO05D004068 4.8e-46 188.0 132 68.9
Actinidia01972 Actinidia chinensis HOM05D003516 ORTHO05D004068 4.0e-45 184.9 132 68.9
TAR371G0601 Trochodendron aralioides HOM05D003516 ORTHO05D004068 5.3e-45 184.5 132 68.2
Prupe.3G260300 Prunus persica HOM05D003516 ORTHO05D004068 2.0e-44 182.6 132 66.7
Cfa007618 Carpinus fangiana HOM05D003516 ORTHO05D004068 3.4e-44 181.8 114 75.4
VMungo1383G2485 Vigna mungo HOM05D003516 ORTHO05D004068 4.5e-44 181.4 132 66.7
CiPaw.03G092000 Carya illinoinensis HOM05D003516 ORTHO05D004068 5.8e-44 181.0 114 74.6
MD09G1060600 Malus domestica HOM05D003516 ORTHO05D004068 1.3e-43 179.9 132 66.7
Hma1.2p1_0255F.1_g103250 Hydrangea macrophylla HOM05D003516 ORTHO05D004068 2.2e-43 179.1 116 74.1
Lj4A115T83 Lonicera japonica HOM05D003516 ORTHO05D004068 4.9e-43 177.9 132 64.4
Rhsim10G0034300 Rhododendron simsii HOM05D003516 ORTHO05D004068 4.9e-43 177.9 114 74.6
vmacro05670 Vaccinium macrocarpon HOM05D003516 ORTHO05D004068 6.5e-43 177.6 116 71.6
Glyma.08G241300 Glycine max HOM05D003516 ORTHO05D004068 1.4e-42 176.4 130 64.6
Phvul.008G040100 Phaseolus vulgaris HOM05D003516 ORTHO05D004068 1.4e-42 176.4 132 64.4
TWI34G1153 Tripterygium wilfordii HOM05D003516 ORTHO05D004068 1.4e-42 176.4 116 69.8
TAR371G1100 Trochodendron aralioides HOM05D003516 ORTHO05D004068 1.9e-42 176.0 129 65.9
Atru.chr2.3146 Acer truncatum HOM05D003516 ORTHO05D004068 2.5e-42 175.6 132 61.4
TWI34G0121 Tripterygium wilfordii HOM05D003516 ORTHO05D004068 2.5e-42 175.6 116 69.8
TAR371G1088 Trochodendron aralioides HOM05D003516 ORTHO05D004068 3.2e-42 175.3 129 65.9
SalBow1G1268 Salvia bowleyana HOM05D003516 ORTHO05D004068 7.1e-42 174.1 131 63.4
SalBow1G1829 Salvia bowleyana HOM05D003516 ORTHO05D004068 7.1e-42 174.1 131 63.4
RcHm_v2.0_Chr2g0166731 Rosa chinensis HOM05D003516 ORTHO05D004068 1.2e-41 173.3 130 61.5
Manes.01G099500 Manihot esculenta HOM05D003516 ORTHO05D004068 1.6e-41 172.9 116 70.7
RcHm_v2.0_Chr2g0166761 Rosa chinensis HOM05D003516 ORTHO05D004068 1.6e-41 172.9 130 61.5
Nitab4.5_0000565g0050 Nicotiana tabacum HOM05D003516 ORTHO05D004068 2.1e-41 172.6 111 72.1
QL02p039347 Quercus lobata HOM05D003516 ORTHO05D004068 2.7e-41 172.2 131 64.9
CAN.G206.192 Capsicum annuum HOM05D003516 ORTHO05D004068 4.6e-41 171.4 113 71.7
PGSC0003DMG400001349 Solanum tuberosum HOM05D003516 ORTHO05D004068 6.0e-41 171.0 121 67.8
PGSC0003DMG401001347 Solanum tuberosum HOM05D003516 ORTHO05D004068 6.0e-41 171.0 113 69.9
Ciclev10011701m.g Citrus clementina HOM05D003516 ORTHO05D004068 7.9e-41 170.6 132 62.1
Peaxi162Scf00166g00944 Petunia axillaris HOM05D003516 ORTHO05D004068 7.9e-41 170.6 126 63.5
arahy.Tifrunner.gnm1.ann1.0J6LH7 Arachis hypogaea HOM05D003516 ORTHO05D004068 1.0e-40 170.2 116 69.8
FvH4_6g47610 Fragaria vesca HOM05D003516 ORTHO05D004068 1.0e-40 170.2 130 60.0
Lalb_Chr17g0337081 Lupinus albus HOM05D003516 ORTHO05D004068 1.0e-40 170.2 116 68.1
SalBow1G7786 Salvia bowleyana HOM05D003516 ORTHO05D004068 1.0e-40 170.2 115 67.0
FAN05G5016 Fragaria x ananassa HOM05D003516 ORTHO05D004068 1.3e-40 169.9 130 60.0
Sopen02g033200 Solanum pennellii HOM05D003516 ORTHO05D004068 1.3e-40 169.9 113 69.9
FAN09G4649 Fragaria x ananassa HOM05D003516 ORTHO05D004068 1.8e-40 169.5 130 60.0
Cc07_g03810 Coffea canephora HOM05D003516 ORTHO05D004068 2.3e-40 169.1 116 67.2
Migut.H00662 Erythranthe guttata HOM05D003516 ORTHO05D004068 2.3e-40 169.1 113 69.9
Nitab4.5_0008573g0050 Nicotiana tabacum HOM05D003516 ORTHO05D004068 2.3e-40 169.1 113 69.0
PGSC0003DMG402001347 Solanum tuberosum HOM05D003516 ORTHO05D004068 2.3e-40 169.1 113 69.9
GSVIVG01011482001 Vitis vinifera HOM05D003516 ORTHO05D004068 2.3e-40 169.1 127 61.4
Duzib264G1026 Durio zibethinus HOM05D003516 ORTHO05D004068 3.0e-40 168.7 114 71.1
RcHm_v2.0_Chr2g0166771 Rosa chinensis HOM05D003516 ORTHO05D004068 3.0e-40 168.7 111 70.3
Solyc02g088490.3 Solanum lycopersicum HOM05D003516 ORTHO05D004068 3.0e-40 168.7 113 69.0
Medtr7g011890 Medicago truncatula HOM05D003516 ORTHO05D004068 3.9e-40 168.3 116 67.2
Nn4g23326 Nelumbo nucifera HOM05D003516 ORTHO05D004068 3.9e-40 168.3 133 63.2
Nitab4.5_0000565g0040 Nicotiana tabacum HOM05D003516 ORTHO05D004068 6.7e-40 167.5 114 67.5
FvH4_6g47650 Fragaria vesca HOM05D003516 ORTHO05D004068 1.5e-39 166.4 111 68.5
FvH4_6g47700 Fragaria vesca HOM05D003516 ORTHO05D004068 1.5e-39 166.4 111 68.5
FAN14G0784 Fragaria x ananassa HOM05D003516 ORTHO05D004068 1.5e-39 166.4 111 68.5
FAN14G3818 Fragaria x ananassa HOM05D003516 ORTHO05D004068 1.5e-39 166.4 111 68.5
Ah.12g062520 Amaranthus hybridus HOM05D003516 ORTHO05D004068 1.9e-39 166.0 116 69.8
MSTRG.3024 Avicennia marina HOM05D003516 ORTHO05D004068 1.9e-39 166.0 132 59.8
CAN.G206.193 Capsicum annuum HOM05D003516 ORTHO05D004068 2.5e-39 165.6 113 68.1
Lj1g0021677 Lotus japonicus HOM05D003516 ORTHO05D004068 2.5e-39 165.6 132 58.3
Nitab4.5_0003216g0010 Nicotiana tabacum HOM05D003516 ORTHO05D004068 3.3e-39 165.2 114 66.7
PSO675G4642 Papaver somniferum HOM05D003516 ORTHO05D004068 3.3e-39 165.2 133 61.7
SGA_v2.0_scaffold4G02421 Striga asiatica HOM05D003516 ORTHO05D004068 3.3e-39 165.2 117 66.7
Sc14g0006110 Simmondsia chinensis HOM05D003516 ORTHO05D004068 5.7e-39 164.5 113 68.1
Thecc.04G089600 Theobroma cacao HOM05D003516 ORTHO05D004068 5.7e-39 164.5 116 68.1
AUR62034468 Chenopodium quinoa HOM05D003516 ORTHO05D004068 7.4e-39 164.1 132 60.6
PSO541G0811 Papaver somniferum HOM05D003516 ORTHO05D004068 7.4e-39 164.1 133 60.2
Potri.004G126100 Populus trichocarpa HOM05D003516 ORTHO05D004068 7.4e-39 164.1 116 69.0
Sabra04G0066900 Salix brachista HOM05D003516 ORTHO05D004068 9.7e-39 163.7 116 69.0
Medtr4g094268 Medicago truncatula HOM05D003516 ORTHO05D004068 1.3e-38 163.3 132 59.8
PGSC0003DMG400001348 Solanum tuberosum HOM05D003516 ORTHO05D004068 1.3e-38 163.3 121 67.8
AUR62018134 Chenopodium quinoa HOM05D003516 ORTHO05D004068 1.6e-38 162.9 132 61.4
Eucgr.J01366 Eucalyptus grandis HOM05D003516 ORTHO05D004068 1.6e-38 162.9 132 60.6
Glyma.13G059300 Glycine max HOM05D003516 ORTHO05D004068 1.6e-38 162.9 113 66.4
Gohir.D04G045800 Gossypium hirsutum HOM05D003516 ORTHO05D004068 1.6e-38 162.9 111 70.3
Gorai.012G051000 Gossypium raimondii HOM05D003516 ORTHO05D004068 1.6e-38 162.9 111 70.3
Nitab4.5_0008573g0020 Nicotiana tabacum HOM05D003516 ORTHO05D004068 1.6e-38 162.9 114 65.8
Hund15565 Selenicereus undatus HOM05D003516 ORTHO05D004068 1.6e-38 162.9 116 67.2
TPR.G33465 Trifolium pratense HOM05D003516 ORTHO05D004068 1.6e-38 162.9 116 62.9
Ca_04865_v3 Cicer arietinum L. HOM05D003516 ORTHO05D004068 2.8e-38 162.2 132 59.1
MSTRG.23906 Avicennia marina HOM05D003516 ORTHO05D004068 3.7e-38 161.8 116 67.2
Lalb_Chr02g0159071 Lupinus albus HOM05D003516 ORTHO05D004068 4.8e-38 161.4 132 56.1
DCAR_011066 Daucus carota HOM05D003516 ORTHO05D004068 6.3e-38 161.0 116 65.5
Gohir.A05G369500 Gossypium hirsutum HOM05D003516 ORTHO05D004068 6.3e-38 161.0 111 69.4
EL10Ac2g03040 Beta vulgaris HOM05D003516 ORTHO05D004068 8.2e-38 160.6 129 60.5
arahy.Tifrunner.gnm1.ann1.BNNE9K Arachis hypogaea HOM05D003516 ORTHO05D004068 1.4e-37 159.8 113 64.6
Cpa.g.sc14.137 Carica papaya HOM05D003516 ORTHO05D004068 1.4e-37 159.8 129 59.7
AUR62034473 Chenopodium quinoa HOM05D003516 ORTHO05D004068 1.8e-37 159.5 130 60.8
TPR.G26192 Trifolium pratense HOM05D003516 ORTHO05D004068 1.8e-37 159.5 132 57.6
MELO3C009836.2 Cucumis melo HOM05D003516 ORTHO05D004068 3.1e-37 158.7 112 66.1
arahy.Tifrunner.gnm1.ann1.3ST4SV Arachis hypogaea HOM05D003516 ORTHO05D004068 4.1e-37 158.3 113 63.7
Psat3g198560 Pisum sativum HOM05D003516 ORTHO05D004068 4.1e-37 158.3 114 67.5
Sopen02g033240 Solanum pennellii HOM05D003516 ORTHO05D004068 4.1e-37 158.3 113 67.3
COL.COLO4_12254 Corchorus olitorius HOM05D003516 ORTHO05D004068 5.3e-37 157.9 108 71.3
Lj2g0008898 Lotus japonicus HOM05D003516 ORTHO05D004068 5.3e-37 157.9 132 56.8
Ca_04330_v3 Cicer arietinum L. HOM05D003516 ORTHO05D004068 1.2e-36 156.8 113 65.5
Lsat_1_v5_gn_2_87981 Lactuca sativa HOM05D003516 ORTHO05D004068 1.2e-36 156.8 111 65.8
VMungo0464G1139 Vigna mungo HOM05D003516 ORTHO05D004068 1.2e-36 156.8 113 66.4
CsaV3_3G041030 Cucumis sativus L. HOM05D003516 ORTHO05D004068 3.4e-36 155.2 112 65.2
HPP92_023641 Vanilla planifolia HOM05D003516 ORTHO05D004068 3.4e-36 155.2 113 62.8
Nn4g23327 Nelumbo nucifera HOM05D003516 ORTHO05D004068 4.5e-36 154.8 133 60.9
MBI19_g41331_MAGBIO Magnolia biondii HOM05D003516 ORTHO05D004068 5.9e-36 154.5 113 63.7
Psat1g069160 Pisum sativum HOM05D003516 ORTHO05D004068 5.9e-36 154.5 133 54.9
Phvul.004G033000 Phaseolus vulgaris HOM05D003516 ORTHO05D004068 1.7e-35 152.9 113 65.5
HPP92_023623 Vanilla planifolia HOM05D003516 ORTHO05D004068 1.7e-35 152.9 113 61.9
Psat0s4061g0240 Pisum sativum HOM05D003516 ORTHO05D004068 2.2e-35 152.5 108 66.7
AL7G50920 Arabidopsis lyrata HOM05D003516 ORTHO05D004068 2.9e-35 152.1 126 54.0
HanXRQChr14g0448681 Helianthus annuus HOM05D003516 ORTHO05D004068 2.9e-35 152.1 107 67.3
AT5G39410 Arabidopsis thaliana HOM05D003516 ORTHO05D004068 5.0e-35 151.4 126 54.0
Nn4g23324 Nelumbo nucifera HOM05D003516 ORTHO05D004068 5.0e-35 151.4 116 60.3
Aqoxy3G03552 Aquilegia oxysepala HOM05D003516 ORTHO05D004068 8.5e-35 150.6 112 62.5
Sp7g02570 Schrenkiella parvula HOM05D003516 ORTHO05D004068 8.5e-35 150.6 132 52.3
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 1.1e-34 150.2 129 56.6
BcaB06g27298 Brassica carinata HOM05D003516 ORTHO05D004068 1.1e-34 150.2 129 51.9
C04p45730 Brassica napus HOM05D003516 ORTHO05D004068 1.1e-34 150.2 129 51.9
BolC4t26158H Brassica oleracea HOM05D003516 ORTHO05D004068 1.1e-34 150.2 129 51.9
BraA04t16875Z Brassica rapa HOM05D003516 ORTHO05D004068 1.1e-34 150.2 129 51.9
BcaB06g27324 Brassica carinata HOM05D003516 ORTHO05D004068 1.9e-34 149.4 129 51.9
Carub.0007s3653 Capsella rubella HOM05D003516 ORTHO05D004068 2.5e-34 149.1 110 60.9
Thhalv10027760m.g Eutrema salsugineum HOM05D003516 ORTHO05D004068 2.5e-34 149.1 126 52.4
Os07g0597100 Oryza sativa ssp. japonica HOM05D003516 ORTHO05D004068 4.2e-34 148.3 111 59.5
HPP92_020419 Vanilla planifolia HOM05D003516 ORTHO05D004068 4.2e-34 148.3 110 62.7
ECA238G2285 Erigeron canadensis HOM05D003516 ORTHO05D004068 9.3e-34 147.1 107 64.5
unitig_744.g24003 Utricularia gibba HOM05D003516 ORTHO05D004068 9.3e-34 147.1 108 63.0
Lsat_1_v5_gn_2_88041 Lactuca sativa HOM05D003516 ORTHO05D004068 1.2e-33 146.7 110 61.8
ECA238G0029 Erigeron canadensis HOM05D003516 ORTHO05D004068 1.6e-33 146.4 107 64.5
ATR0111G016 Amborella trichopoda HOM05D003516 ORTHO05D004068 2.1e-33 146.0 112 61.6
A04p12100 Brassica napus HOM05D003516 ORTHO05D004068 2.7e-33 145.6 130 51.5
CARHR262950 Cardamine hirsuta HOM05D003516 ORTHO05D004068 2.7e-33 145.6 110 61.8
Lsat_1_v5_gn_2_88001 Lactuca sativa HOM05D003516 ORTHO05D004068 6.1e-33 144.4 110 60.0
Aa31LG9G16580 Aethionema arabicum HOM05D003516 ORTHO05D004068 7.9e-33 144.1 113 61.9
CDE04G1400 Ceratophyllum demersum HOM05D003516 ORTHO05D004068 1.8e-32 142.9 114 60.5
SEGI_01701 Sequoiadendron giganteum HOM05D003516 ORTHO05D004068 3.0e-32 142.1 130 52.3
HanXRQChr14g0448661 Helianthus annuus HOM05D003516 ORTHO05D004068 5.1e-32 141.4 108 63.0
THA.LOC104823897 Tarenaya hassleriana HOM05D003516 ORTHO05D004068 6.7e-32 141.0 130 51.5
Psat3g198720 Pisum sativum HOM05D003516 ORTHO05D004068 1.7e-30 136.3 97 64.9
ECA238G1443 Erigeron canadensis HOM05D003516 ORTHO05D004068 8.2e-30 134.0 111 57.7
Zm00001eb326640 Zea mays HOM05D003516 ORTHO05D004068 2.4e-29 132.5 112 57.1
HanXRQChr17g0546731 Helianthus annuus HOM05D003516 ORTHO05D004068 5.3e-29 131.3 113 54.0
SEGI_26660 Sequoiadendron giganteum HOM05D003516 ORTHO05D004068 9.1e-29 130.6 130 50.0
Mapoly0061s0022 Marchantia polymorpha HOM05D003516 ORTHO05D004068 1.5e-28 129.8 110 50.9
SMO364G0897 Selaginella moellendorffii HOM05D003516 ORTHO05D004068 5.0e-27 124.8 108 52.8
MELO3C009835.2 Cucumis melo HOM05D003516 ORTHO05D004068 6.5e-27 124.4 106 58.5
Pp3c7_23970 Physcomitrium patens HOM05D003516 ORTHO05D004068 6.5e-27 124.4 110 56.4
ClCG10G015460 Citrullus lanatus HOM05D003516 ORTHO05D004068 1.1e-26 123.6 115 54.8
CsaV3_3G041020 Cucumis sativus L. HOM05D003516 ORTHO05D004068 4.2e-26 121.7 106 58.5
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 7.2e-26 120.9 85 67.1
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 9.7e-23 110.5 82 63.4
AagrBONN_evm.TU.Sc2ySwM_369.232 Anthoceros agrestis HOM05D003516 ORTHO05D004068 3.7e-22 108.6 102 48.0
AagrBONN_evm.TU.Sc2ySwM_228.5734 Anthoceros agrestis HOM05D003516 ORTHO05D004068 4.1e-21 105.1 106 41.5
Sed0002556 Sechium edule HOM05D003516 ORTHO05D004068 3.6e-17 92.0 90 53.3
SMO364G0931 Selaginella moellendorffii HOM05D003516 ORTHO05D004068 1.0e-16 90.5 89 47.2
AagrBONN_evm.TU.Sc2ySwM_344.722 Anthoceros agrestis HOM05D003516 ORTHO05D004068 5.7e-15 84.7 100 43.0
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 6.3e-14 81.3 51 68.6
RcHm_v2.0_Chr4g0415101 Rosa chinensis HOM05D003516 ORTHO05D004068 8.2e-14 80.9 65 50.8
HanXRQChr14g0448671 Helianthus annuus HOM05D003516 ORTHO05D004068 1.6e-09 66.6 74 47.3
SalBow1G3591 Salvia bowleyana HOM05D020262 ORTHO05D004068 5.7e-07 58.2 49 61.2
SalBow8G5577 Salvia bowleyana HOM05D020262 ORTHO05D004068 5.7e-07 58.2 49 61.2
Medtr5g064800 Medicago truncatula HOM05D009584 ORTHO05D011650 2.2e-06 56.2 43 58.1
SEGI_25923 Sequoiadendron giganteum HOM05D003516 ORTHO05D004068 6.3e-06 54.7 60 43.3
Pp3c2_35640 Physcomitrium patens HOM05D003516 ORTHO05D004068 8.2e-06 54.3 53 39.6


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