Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 4.4e-225 784.3 381 100.0
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 1.7e-165 586.3 372 73.9
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 6.6e-165 584.3 371 76.0
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 8.1e-163 577.4 371 74.4
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 1.1e-162 577.0 371 72.8
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 8.9e-162 573.9 373 71.3
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 5.8e-161 571.2 373 71.0
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 9.9e-161 570.5 373 71.0
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 2.9e-160 568.9 367 72.2
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 2.9e-160 568.9 370 71.4
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 3.8e-160 568.5 373 71.3
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 5.4e-159 564.7 373 71.0
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 3.5e-158 562.0 392 68.9
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 6.0e-158 561.2 369 72.1
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 1.3e-157 560.1 373 71.3
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 2.5e-156 555.8 373 71.3
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 3.3e-156 555.4 371 70.9
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 4.3e-156 555.1 371 71.4
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 4.3e-156 555.1 372 71.0
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 9.6e-156 553.9 369 71.8
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 2.1e-155 552.7 368 69.8
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 3.6e-155 552.0 372 68.5
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 4.7e-155 551.6 372 68.8
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 6.2e-155 551.2 373 70.2
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 8.1e-155 550.8 372 68.5
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 1.1e-154 550.4 371 69.0
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 1.8e-154 549.7 369 68.6
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 1.8e-154 549.7 374 68.7
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 2.4e-154 549.3 372 70.4
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 6.9e-154 547.7 367 68.4
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 1.5e-153 546.6 373 68.9
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 5.8e-153 544.7 373 68.9
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 7.6e-153 544.3 375 68.5
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 9.9e-153 543.9 373 68.4
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 2.2e-152 542.7 372 70.4
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 2.9e-152 542.3 371 68.7
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 3.8e-152 542.0 371 69.0
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 1.1e-151 540.4 372 69.9
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.4e-151 540.0 374 68.4
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 7.1e-151 537.7 373 71.0
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 9.3e-151 537.3 373 68.6
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 9.3e-151 537.3 372 67.2
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 1.6e-150 536.6 372 69.9
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 2.1e-150 536.2 371 68.5
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 2.7e-150 535.8 375 67.5
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 7.8e-150 534.3 365 69.0
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 3.0e-149 532.3 379 66.8
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 1.5e-148 530.0 373 69.4
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 2.6e-145 519.2 373 67.3
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 5.8e-145 518.1 371 66.6
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 8.4e-144 514.2 373 64.9
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 2.7e-142 509.2 373 64.9
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 1.8e-141 506.5 371 64.4
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 1.8e-141 506.5 351 69.5
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 2.3e-141 506.1 373 63.8
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 3.9e-141 505.4 373 65.1
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 4.3e-140 501.9 372 66.1
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 3.7e-139 498.8 371 65.0
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 4.8e-139 498.4 367 64.6
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.8e-139 498.4 373 64.3
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 2.4e-138 496.1 369 64.5
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 3.1e-138 495.7 376 64.1
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 9.0e-138 494.2 371 64.7
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 5.5e-135 485.0 372 63.2
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 1.2e-134 483.8 381 63.0
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 1.6e-134 483.4 362 65.7
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 5.1e-133 478.4 363 64.2
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 1.9e-132 476.5 371 62.0
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 2.8e-131 472.6 397 58.9
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 2.8e-131 472.6 372 61.8
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 4.8e-131 471.9 372 62.4
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 4.8e-131 471.9 369 62.6
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 6.2e-131 471.5 372 60.5
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 1.4e-127 460.3 368 60.6
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 7.1e-127 458.0 252 86.5
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.3e-123 447.2 372 60.8
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 3.7e-123 445.7 377 57.6
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 2.0e-121 439.9 370 60.5
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 7.7e-121 438.0 364 59.1
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 1.9e-111 406.8 388 56.2
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 2.7e-102 376.3 311 60.1
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 1.1e-100 370.9 376 48.1
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 7.2e-95 351.7 396 47.0
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 5.2e-93 345.5 219 78.1
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 1.2e-86 324.3 204 78.9
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 1.2e-84 317.8 353 50.1
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 9.5e-79 298.1 297 50.8
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 6.8e-77 292.0 375 42.1
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 4.4e-76 289.3 183 73.8
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 9.8e-76 288.1 376 41.2
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 2.5e-71 273.5 204 64.7
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 7.0e-66 255.4 380 38.2
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 1.0e-64 251.5 217 57.1
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 1.7e-64 250.8 323 40.9
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 5.0e-64 249.2 185 64.3
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 1.6e-62 244.2 249 51.8
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 3.6e-62 243.0 271 50.2
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 1.8e-61 240.7 183 62.3
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 1.2e-60 238.0 226 54.9
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 1.2e-60 238.0 226 54.9
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 2.4e-58 230.3 149 73.8
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 3.0e-56 223.4 183 59.0
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 3.9e-56 223.0 404 36.4
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 8.9e-53 211.8 177 59.3
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 2.5e-47 193.7 149 61.1
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 1.6e-46 191.0 126 69.0
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 4.7e-46 189.5 102 86.3
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 4.4e-44 183.0 153 60.1
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 8.4e-43 178.7 149 62.4
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 1.9e-42 177.6 261 41.0
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 1.5e-39 167.9 143 58.0
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 2.9e-35 153.7 122 62.3
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 5.4e-34 149.4 173 48.6
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 7.1e-26 122.5 232 34.1
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 9.0e-21 105.5 78 65.4
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 1.5e-20 104.8 103 44.7
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 3.8e-19 100.1 98 54.1
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 6.5e-19 99.4 343 25.1
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.2e-18 96.7 73 67.1
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 1.6e-17 94.7 159 42.1
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 1.3e-16 91.7 103 52.4
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.5e-15 88.2 188 37.8
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 1.8e-13 81.3 74 50.0
arahy.Tifrunner.gnm1.ann1.IN0C4L Arachis hypogaea HOM05D006665 ORTHO05D012122 9.7e-07 58.9 80 45.0


User provided reference genes

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