Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008136 Camellia sinensis var. sinensis HOM05D024766 ORTHO05D000044 2.2e-38 161.8 80 100.0
CSS0021084 Camellia sinensis var. sinensis HOM05D024766 ORTHO05D000044 1.4e-27 125.9 80 77.5
CSS0016156 Camellia sinensis var. sinensis HOM05D024766 ORTHO05D000044 4.3e-26 120.9 80 75.0
CSS0008820 Camellia sinensis var. sinensis HOM05D024766 ORTHO05D000044 4.1e-24 114.4 74 73.0
CSS0007894 Camellia sinensis var. sinensis HOM05D024766 ORTHO05D000044 7.7e-23 110.2 74 73.0
TWI81G0819 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.4e-13 76.6 57 61.4
TWI23G0626 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.0e-12 73.6 57 57.9
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.4e-11 72.8 55 60.0
CSS0006021 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.3e-09 66.2 55 56.4
CSS0045473 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.7e-09 65.9 55 56.4
CSS0045547 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.7e-09 65.9 55 56.4
CSS0034255 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.2e-09 65.5 55 54.5
CSS0015439 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.8e-09 65.1 55 54.5
CSS0040714 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.8e-09 65.1 55 54.5
CSS0014020 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.7e-09 64.7 55 54.5
CSS0015727 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.8e-09 64.3 55 54.5
CSS0033312 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.8e-09 64.3 55 52.7
CSS0002461 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.3e-09 63.9 55 54.5
CSS0040191 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.3e-09 63.9 55 56.4
CSS0017015 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.2e-09 63.5 55 52.7
CSS0024428 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.1e-08 63.2 55 49.1
CSS0011560 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.4e-08 62.8 55 52.7
TWI59G0943 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-08 62.4 54 53.7
CSS0010289 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.4e-08 62.0 55 50.9
TWI63G1134 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.4e-08 62.0 57 50.9
CSS0043746 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.1e-08 61.6 56 50.0
CSS0012037 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.1e-08 61.2 55 49.1
CSS0039774 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.3e-08 60.8 55 49.1
CSS0049046 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.3e-08 60.8 55 50.9
CSS0013377 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.0e-08 60.5 55 49.1
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 7.0e-08 60.5 55 56.4
Manes.14G150650 Manihot esculenta HOM05D000047 ORTHO05D000044 7.0e-08 60.5 55 56.4
CSS0005854 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.1e-08 60.1 55 52.7
CSS0040660 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.1e-08 60.1 55 49.1
ECA247G3758 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.1e-08 60.1 60 50.0
CSS0015707 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.2e-07 59.7 55 52.7
CSS0012345 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.0e-07 58.9 55 49.1
Cc02_g08930 Coffea canephora HOM05D000047 ORTHO05D000044 2.0e-07 58.9 55 52.7
ECA232G3691 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.5e-07 57.8 56 51.8
CSS0030060 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.7e-07 57.0 55 49.1
CANSAT80G2244 Cannabis sativa HOM05D000047 ORTHO05D000044 7.7e-07 57.0 58 43.1
ECA233G0513 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.7e-07 57.0 56 51.8
QL04p087285 Quercus lobata HOM05D000047 ORTHO05D000044 7.7e-07 57.0 55 49.1
ECA232G2522 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.0e-06 56.6 60 51.7
ECA238G2863 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.0e-06 56.6 63 44.4
Oeu046016.1 Olea europaea HOM05D000047 ORTHO05D000044 1.0e-06 56.6 55 49.1
CSS0043879 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.7e-06 55.8 55 43.6
ECA232G0142 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.7e-06 55.8 56 51.8
ECA236G1756 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.7e-06 55.8 60 51.7
ECA236G2167 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.7e-06 55.8 63 44.4
ECA236G4112 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.7e-06 55.8 63 44.4
ECA240G2165 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.7e-06 55.8 63 42.9
Oeu012570.1 Olea europaea HOM05D000047 ORTHO05D000044 1.7e-06 55.8 55 47.3
TWI18G0073 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.7e-06 55.8 55 41.8
ECA233G4752 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.2e-06 55.5 63 44.4
ECA236G4015 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.2e-06 55.5 63 44.4
FvH4_4g05722 Fragaria vesca HOM05D000047 ORTHO05D000044 2.2e-06 55.5 49 57.1
FvH4_4g09823 Fragaria vesca HOM05D000014 ORTHO05D000016 2.2e-06 55.5 57 47.4
CSS0018256 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.9e-06 55.1 55 41.8
Oeu018919.1 Olea europaea HOM05D000047 ORTHO05D000044 2.9e-06 55.1 55 47.3
Oeu046277.1 Olea europaea HOM05D000047 ORTHO05D000044 2.9e-06 55.1 55 47.3
Oeu056447.1 Olea europaea HOM05D000047 ORTHO05D000044 2.9e-06 55.1 55 47.3
Actinidia05896 Actinidia chinensis HOM05D000047 ORTHO05D000044 3.8e-06 54.7 55 45.5
ECA233G1661 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.8e-06 54.7 63 44.4
ECA246G3590 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.8e-06 54.7 60 51.7
PSO478G0389 Papaver somniferum HOM05D000047 ORTHO05D000044 3.8e-06 54.7 57 49.1
QL01p034770 Quercus lobata HOM05D000047 ORTHO05D000044 3.8e-06 54.7 55 43.6
QL03p039823 Quercus lobata HOM05D000047 ORTHO05D000044 3.8e-06 54.7 55 45.5
CSS0033775 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.0e-06 54.3 58 36.2
ECA232G2808 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.0e-06 54.3 56 50.0
ECA233G3367 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.0e-06 54.3 63 42.9
ECA247G0240 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.0e-06 54.3 60 50.0
ECA247G0778 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.0e-06 54.3 63 42.9
ECA248G1019 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.0e-06 54.3 63 42.9
PSO478G4639 Papaver somniferum HOM05D000047 ORTHO05D000044 5.0e-06 54.3 57 47.4
PSO675G4713 Papaver somniferum HOM05D000047 ORTHO05D000044 5.0e-06 54.3 57 45.6
TWI81G0360 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.0e-06 54.3 55 50.9
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.5e-06 53.9 55 45.5
ECA232G2070 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.5e-06 53.9 55 47.3
ECA233G0463 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.5e-06 53.9 63 44.4
ECA246G2553 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.5e-06 53.9 63 42.9
Oeu051972.1 Olea europaea HOM05D000047 ORTHO05D000044 6.5e-06 53.9 55 47.3
CSS0027411 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.5e-06 53.5 55 47.3
AUR62026395 Chenopodium quinoa HOM05D000047 ORTHO05D000044 8.5e-06 53.5 55 49.1
ECA234G0366 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.5e-06 53.5 63 42.9
Oeu025200.1 Olea europaea HOM05D000047 ORTHO05D000044 8.5e-06 53.5 55 45.5
Oeu046617.1 Olea europaea HOM05D000047 ORTHO05D000044 8.5e-06 53.5 55 45.5


User provided reference genes

Program Settings