Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.6e-67 257.3 135 100.0
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.3e-59 233.0 134 90.3
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.0e-59 231.9 135 91.1
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.9e-59 231.5 135 90.4
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.3e-58 228.0 135 89.6
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.1e-57 225.7 135 89.6
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.8e-57 225.3 135 88.1
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.9e-56 220.3 135 88.1
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-53 213.0 133 84.2
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.0e-53 210.7 131 85.5
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 8.4e-14 80.9 97 42.3
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 1.1e-13 80.5 101 41.6
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.9e-13 79.7 95 49.5
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 9.3e-13 77.4 109 43.1
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.2e-12 77.0 105 43.8
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 6.0e-12 74.7 104 42.3
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 3.9e-11 72.0 94 43.6
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.1e-11 71.6 73 50.7
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.7e-11 71.2 73 49.3
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.9e-10 69.7 111 36.0
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.3e-10 68.6 97 38.1
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 5.6e-10 68.2 97 37.1
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 7.4e-10 67.8 92 38.0
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 9.6e-10 67.4 117 42.7
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 1.3e-09 67.0 108 38.0
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.3e-09 67.0 124 36.3
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.6e-09 66.6 99 39.4
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.8e-09 65.9 102 39.2
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.8e-09 65.9 76 44.7
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 2.8e-09 65.9 110 39.1
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 3.7e-09 65.5 102 39.2
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 4.8e-09 65.1 92 37.0
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.8e-09 65.1 73 46.6
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 1.4e-08 63.5 97 43.3
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.4e-08 63.5 75 46.7
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.8e-08 63.2 96 38.5
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 2.4e-08 62.8 97 34.0
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 2.4e-08 62.8 99 37.4
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 2.4e-08 62.8 91 37.4
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.0e-08 62.0 97 40.2
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.0e-08 62.0 118 38.1
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.3e-08 61.6 116 37.9
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 6.9e-08 61.2 134 32.1
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 6.9e-08 61.2 93 36.6
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.2e-07 60.5 134 34.3
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.2e-07 60.5 95 37.9
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.2e-07 60.5 115 36.5
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.2e-07 60.5 124 34.7
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-07 60.1 119 37.0
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.0e-07 59.7 90 40.0
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.6e-07 59.3 99 37.4
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 2.6e-07 59.3 87 35.6
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 3.4e-07 58.9 80 40.0
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.4e-07 58.9 127 30.7
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.4e-07 58.9 127 30.7
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.6e-07 57.8 90 38.9
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 1.3e-06 57.0 71 46.5
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 1.3e-06 57.0 101 36.6
RhsimUnG0216000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.7e-06 56.6 124 35.5
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.2e-06 56.2 112 35.7
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 2.2e-06 56.2 98 31.6
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 2.9e-06 55.8 78 41.0


User provided reference genes

Program Settings