Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 6.6e-58 227.3 122 100.0
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.3e-57 224.9 122 99.2
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 6.1e-56 220.7 122 95.9
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.3e-53 213.0 122 92.6
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 2.9e-53 211.8 122 91.0
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 1.1e-52 209.9 119 91.6
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 1.6e-51 206.1 121 88.4
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 1.6e-51 206.1 122 87.7
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 3.9e-50 201.4 122 86.1
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 6.6e-50 200.7 122 85.2
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 1.1e-49 199.9 122 83.6
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.1e-49 199.9 122 83.6
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.5e-49 199.5 120 86.7
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 1.9e-49 199.1 120 85.0
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 1.9e-49 199.1 122 84.4
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 2.5e-49 198.7 122 84.4
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 2.5e-49 198.7 122 85.2
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 2.5e-49 198.7 122 85.2
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 3.3e-49 198.4 122 82.8
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 3.3e-49 198.4 122 82.8
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 5.6e-49 197.6 120 85.0
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 1.2e-48 196.4 122 83.6
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 1.2e-48 196.4 122 82.8
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.2e-48 196.4 122 82.8
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 1.6e-48 196.1 120 83.3
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 1.6e-48 196.1 120 83.3
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.6e-48 196.1 122 82.8
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 2.8e-48 195.3 122 82.8
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 2.8e-48 195.3 120 83.3
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 3.6e-48 194.9 122 82.0
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 3.6e-48 194.9 122 82.0
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 4.7e-48 194.5 122 80.3
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 4.7e-48 194.5 122 80.3
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 4.7e-48 194.5 120 84.2
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 8.0e-48 193.7 122 82.0
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 1.1e-47 193.4 122 82.0
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.4e-47 193.0 122 82.0
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.4e-47 193.0 122 81.1
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 1.4e-47 193.0 122 82.8
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 1.8e-47 192.6 122 81.1
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.8e-47 192.6 122 81.1
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 2.3e-47 192.2 122 80.3
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 3.1e-47 191.8 122 80.3
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 3.1e-47 191.8 122 80.3
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 3.1e-47 191.8 122 81.1
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 4.0e-47 191.4 122 80.3
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 8.9e-47 190.3 120 81.7
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 8.9e-47 190.3 121 81.8
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 1.2e-46 189.9 122 81.1
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.2e-46 189.9 122 80.3
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.2e-46 189.9 122 80.3
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.5e-46 189.5 120 81.7
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 1.5e-46 189.5 120 81.7
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 2.6e-46 188.7 120 81.7
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 2.6e-46 188.7 122 81.1
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 4.4e-46 188.0 122 79.5
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 4.4e-46 188.0 122 80.3
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 4.4e-46 188.0 120 81.7
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 5.8e-46 187.6 122 79.5
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 5.8e-46 187.6 120 81.7
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 1.3e-45 186.4 120 80.8
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 1.3e-45 186.4 121 79.3
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 1.3e-45 186.4 122 77.9
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 2.2e-45 185.7 122 76.2
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 2.2e-45 185.7 122 77.9
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 2.2e-45 185.7 122 78.7
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 2.2e-45 185.7 122 77.9
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.2e-45 185.7 122 76.2
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 8.3e-45 183.7 122 77.9
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 8.3e-45 183.7 120 81.7
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 1.4e-44 183.0 122 75.4
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 1.4e-44 183.0 120 79.2
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 2.4e-44 182.2 123 78.0
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 3.2e-44 181.8 122 80.3
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 3.2e-44 181.8 122 76.2
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 4.1e-44 181.4 122 75.4
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 7.1e-44 180.6 122 77.0
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 9.2e-44 180.3 119 79.0
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 9.2e-44 180.3 119 79.0
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 9.2e-44 180.3 122 74.6
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.2e-43 179.9 122 75.4
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.2e-43 179.9 122 75.4
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 1.2e-43 179.9 120 78.3
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 1.6e-43 179.5 115 80.0
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 1.6e-43 179.5 109 85.3
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 2.7e-43 178.7 122 75.4
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 2.7e-43 178.7 122 75.4
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 2.7e-43 178.7 120 77.5
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 3.5e-43 178.3 122 75.4
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 7.8e-43 177.2 122 74.6
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.0e-42 176.8 123 75.6
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 8.6e-42 173.7 122 75.4
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 1.9e-41 172.6 172 58.7
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.5e-41 172.2 122 75.4
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 5.6e-41 171.0 121 74.4
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 5.6e-41 171.0 121 74.4
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 5.6e-41 171.0 122 73.0
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 5.6e-41 171.0 135 71.1
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 9.5e-41 170.2 122 73.0
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 9.5e-41 170.2 121 74.4
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 9.5e-41 170.2 121 74.4
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.2e-40 169.9 123 74.0
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 1.6e-40 169.5 120 74.2
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 3.6e-40 168.3 148 65.5
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 1.1e-39 166.8 122 73.8
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.5e-38 162.9 94 93.6
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 4.4e-38 161.4 131 66.4
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 5.8e-38 161.0 91 94.5
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.3e-37 159.8 122 69.7
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 1.7e-34 149.4 115 64.3
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.3e-34 149.1 91 83.5
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 1.2e-32 143.3 119 58.8
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 2.8e-32 142.1 91 80.2
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 8.9e-31 137.1 103 68.0
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 1.4e-28 129.8 91 73.6
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 7.1e-28 127.5 101 63.4
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 1.0e-26 123.6 127 58.3
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 1.6e-24 116.3 69 85.5
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.2e-22 110.2 70 77.1
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.4e-20 103.2 115 51.3
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.5e-17 93.2 46 100.0
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 5.3e-15 84.7 58 77.6
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.1e-12 77.0 52 80.8
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 2.3e-10 69.3 51 68.6
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 5.1e-10 68.2 52 69.2
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 6.2e-08 61.2 37 78.4
BcaC05g26083 Brassica carinata HOM05D006317 ORTHO05D007852 1.0e-05 53.9 40 70.0


User provided reference genes

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