Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 3.9e-162 574.7 283 100.0
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 4.3e-129 464.9 286 82.2
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 1.7e-117 426.4 252 83.3
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.7e-109 399.8 258 76.0
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 8.0e-107 391.0 267 73.4
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.0e-106 390.6 258 76.4
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.3e-106 389.4 263 72.6
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 2.6e-105 386.0 200 90.0
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.6e-105 386.0 263 71.9
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 5.7e-105 384.8 271 71.6
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.2e-104 382.9 253 74.7
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 3.7e-104 382.1 269 71.7
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 3.7e-104 382.1 269 71.7
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 6.3e-104 381.3 274 71.5
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.4e-103 380.2 251 74.1
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 3.1e-103 379.0 272 72.1
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 3.1e-103 379.0 260 71.5
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 5.3e-103 378.3 254 73.2
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.2e-102 377.1 245 73.5
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.6e-102 376.7 258 72.1
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 3.5e-102 375.6 270 73.3
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 4.5e-102 375.2 251 74.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 4.5e-102 375.2 254 74.0
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 7.7e-102 374.4 254 74.0
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 7.7e-102 374.4 277 69.0
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.7e-101 373.2 251 73.7
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 8.5e-101 370.9 260 70.4
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 1.1e-100 370.5 239 74.9
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.1e-100 370.5 247 74.1
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 1.1e-100 370.5 268 73.1
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.5e-100 370.2 263 71.1
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.5e-100 369.4 255 72.9
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 3.2e-100 369.0 255 71.4
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 3.2e-100 369.0 263 71.1
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 3.2e-100 369.0 223 78.0
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.6e-99 366.7 262 69.5
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 2.1e-99 366.3 253 71.1
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.6e-99 365.5 263 71.9
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 3.6e-99 365.5 251 72.5
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 4.7e-99 365.2 256 73.0
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.0e-98 364.0 192 87.5
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.8e-98 363.2 201 83.6
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 5.2e-98 361.7 258 70.2
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 8.8e-98 360.9 250 70.8
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.6e-97 359.4 265 71.3
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 4.4e-97 358.6 264 69.7
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 5.7e-97 358.2 272 66.9
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 5.7e-97 358.2 253 70.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 1.3e-96 357.1 264 70.1
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 2.2e-96 356.3 259 70.3
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 2.2e-96 356.3 264 69.3
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 2.8e-96 355.9 207 80.2
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 6.3e-96 354.8 277 67.5
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 8.3e-96 354.4 194 85.1
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 8.3e-96 354.4 194 85.1
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.1e-95 354.0 219 75.8
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.1e-95 354.0 377 55.4
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.8e-95 353.2 251 71.3
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.8e-95 353.2 202 82.2
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 9.1e-95 350.9 222 75.7
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 2.0e-94 349.7 251 69.7
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 3.5e-94 349.0 251 67.7
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 3.5e-94 349.0 250 70.0
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.3e-93 347.1 252 67.5
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 1.7e-93 346.7 219 75.3
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 1.7e-93 346.7 251 64.9
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 3.8e-93 345.5 196 82.1
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 5.0e-93 345.1 196 81.6
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 8.6e-93 344.4 196 81.1
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.5e-92 343.6 196 82.1
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 4.2e-92 342.0 200 79.5
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 2.8e-91 339.3 194 79.4
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 6.1e-91 338.2 226 71.7
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 8.0e-91 337.8 236 70.3
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.0e-90 337.4 201 79.1
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.0e-90 337.4 201 79.1
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 3.4e-89 332.4 245 66.9
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 4.4e-89 332.0 197 79.2
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 7.5e-89 331.3 204 77.5
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.1e-87 327.4 266 65.0
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 1.8e-87 326.6 269 63.2
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 7.0e-87 324.7 198 76.8
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.2e-86 323.9 269 63.2
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 4.5e-86 322.0 250 65.2
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.7e-85 320.1 197 74.6
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 8.6e-85 317.8 194 74.2
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.1e-83 313.2 251 63.3
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 2.8e-83 312.8 193 75.6
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 4.9e-80 302.0 292 58.2
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.8e-79 300.1 191 74.3
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.4e-79 299.7 229 64.6
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 4.6e-78 295.4 167 80.2
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 6.6e-77 291.6 169 79.3
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 6.2e-75 285.0 187 70.6
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.2e-75 285.0 163 79.1
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 1.9e-71 273.5 211 69.7
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 4.3e-68 262.3 216 66.2
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.1e-58 231.1 191 66.0
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 2.4e-58 229.9 182 68.1
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 6.8e-58 228.4 121 85.1
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 9.2e-55 218.0 239 54.4
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 3.0e-53 213.0 121 79.3
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 2.8e-51 206.5 210 55.7
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 1.1e-50 204.5 487 32.6
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.5e-49 200.7 171 62.6
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.1e-47 194.5 260 47.3
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.3e-45 187.6 169 58.6
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.5e-44 183.3 167 63.5
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.6e-38 162.5 94 76.6
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 4.8e-35 152.5 215 44.7
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.2e-33 147.9 73 89.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.0e-30 135.6 73 83.6
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 4.3e-28 129.4 72 79.2
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 6.9e-18 95.5 96 55.2
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 1.3e-11 74.7 65 61.5
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-09 68.2 61 60.7


User provided reference genes

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