Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 8.6e-93 343.6 167 100.0
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.6e-89 332.0 167 97.0
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 8.8e-37 157.5 73 97.3
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 8.8e-37 157.5 73 97.3
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 1.1e-36 157.1 73 97.3
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 1.1e-36 157.1 73 95.9
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 1.1e-36 157.1 73 97.3
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 1.5e-36 156.8 73 95.9
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 2.5e-36 156.0 73 95.9
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 2.5e-36 156.0 73 95.9
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 2.5e-36 156.0 73 95.9
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 2.5e-36 156.0 73 95.9
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.5e-36 156.0 73 95.9
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 3.3e-36 155.6 73 95.9
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 4.3e-36 155.2 73 95.9
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 4.3e-36 155.2 73 94.5
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 4.3e-36 155.2 73 95.9
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 7.4e-36 154.5 73 95.9
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 7.4e-36 154.5 73 95.9
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 7.4e-36 154.5 73 94.5
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 7.4e-36 154.5 73 94.5
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 9.7e-36 154.1 73 94.5
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 9.7e-36 154.1 73 94.5
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 9.7e-36 154.1 73 94.5
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 9.7e-36 154.1 73 94.5
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 9.7e-36 154.1 73 95.9
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 9.7e-36 154.1 73 94.5
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 1.7e-35 153.3 73 93.2
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.2e-35 152.9 73 93.2
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 2.2e-35 152.9 73 93.2
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 2.2e-35 152.9 73 93.2
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.8e-35 152.5 73 93.2
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 2.8e-35 152.5 73 93.2
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 2.8e-35 152.5 73 93.2
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 2.8e-35 152.5 73 91.8
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 2.8e-35 152.5 73 93.2
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 4.8e-35 151.8 73 93.2
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 4.8e-35 151.8 73 94.5
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 4.8e-35 151.8 73 93.2
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 6.3e-35 151.4 73 90.4
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 8.2e-35 151.0 73 91.8
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 8.2e-35 151.0 73 91.8
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 8.2e-35 151.0 73 93.2
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 1.1e-34 150.6 73 93.2
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 1.1e-34 150.6 73 91.8
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 1.1e-34 150.6 73 91.8
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 1.4e-34 150.2 73 91.8
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 1.4e-34 150.2 73 93.2
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 1.4e-34 150.2 73 90.4
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 1.8e-34 149.8 73 91.8
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 1.8e-34 149.8 73 91.8
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 1.8e-34 149.8 73 91.8
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.8e-34 149.8 73 90.4
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 1.8e-34 149.8 73 90.4
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 2.4e-34 149.4 73 90.4
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 2.4e-34 149.4 73 90.4
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 3.1e-34 149.1 73 87.7
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 5.3e-34 148.3 73 89.0
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 5.3e-34 148.3 73 89.0
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 6.9e-34 147.9 73 89.0
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 9.1e-34 147.5 73 89.0
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 9.1e-34 147.5 72 91.7
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 1.2e-33 147.1 73 90.4
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 1.2e-33 147.1 73 86.3
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 1.5e-33 146.7 73 90.4
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 1.5e-33 146.7 73 89.0
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 1.5e-33 146.7 74 90.5
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 4.5e-33 145.2 73 87.7
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 7.7e-33 144.4 73 87.7
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 1.3e-32 143.7 73 87.7
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 1.7e-32 143.3 74 86.5
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 6.5e-32 141.4 73 82.2
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 1.1e-31 140.6 74 85.1
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 1.9e-31 139.8 88 75.0
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.6e-30 136.7 64 96.9
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 1.6e-30 136.7 73 80.8
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 7.9e-30 134.4 97 66.0
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 1.3e-27 127.1 73 74.0
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 1.3e-27 127.1 73 75.3
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 9.1e-26 120.9 73 72.6
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 8.2e-19 97.8 48 87.5
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 1.1e-18 97.4 46 91.3
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 2.6e-17 92.8 47 83.0
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 7.7e-09 64.7 29 93.1


User provided reference genes

Program Settings