Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 5.8e-291 1003.4 484 100.0
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 3.3e-278 961.1 487 94.9
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 6.9e-276 953.4 487 93.2
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 9.0e-276 953.0 486 94.2
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 9.9e-275 949.5 487 93.6
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.3e-274 949.1 487 93.8
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.7e-274 948.7 486 94.2
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 8.4e-274 946.4 484 93.2
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 1.4e-273 945.7 487 93.2
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.9e-273 945.3 487 93.4
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.4e-273 944.9 486 92.8
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 4.2e-273 944.1 486 93.2
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.5e-272 941.0 487 93.0
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 4.6e-272 940.6 487 93.8
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 1.0e-271 939.5 487 92.8
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.8e-271 938.7 487 93.0
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 3.9e-271 937.6 487 93.4
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 3.9e-271 937.6 487 92.6
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 8.7e-271 936.4 483 93.4
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 8.7e-271 936.4 484 91.7
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 9.6e-270 932.9 487 91.8
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 9.6e-270 932.9 487 91.6
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.6e-269 932.2 486 93.0
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 3.7e-269 931.0 484 92.4
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 3.7e-269 931.0 492 91.1
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 6.2e-269 930.2 483 91.9
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 8.1e-269 929.9 484 91.9
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 8.1e-269 929.9 487 91.6
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 8.1e-269 929.9 486 92.4
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 2.4e-268 928.3 484 91.7
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 2.4e-268 928.3 486 91.8
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 3.1e-268 927.9 486 92.0
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 4.0e-268 927.5 471 94.3
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 9.0e-268 926.4 487 91.2
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.5e-267 925.6 487 91.0
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 1.5e-267 925.6 484 91.5
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 2.0e-267 925.2 484 91.7
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 2.0e-267 925.2 487 91.0
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 3.4e-267 924.5 487 90.8
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 7.6e-267 923.3 486 91.6
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 1.0e-266 922.9 484 92.1
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.0e-266 922.9 484 91.5
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.0e-266 922.9 485 91.1
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.7e-266 922.2 487 90.6
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 2.2e-266 921.8 487 91.2
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 2.9e-266 921.4 486 90.7
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 2.9e-266 921.4 487 91.4
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 3.8e-266 921.0 486 90.3
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 3.8e-266 921.0 486 90.7
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 4.9e-266 920.6 485 90.9
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 1.1e-265 919.5 485 90.3
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.4e-265 919.1 485 89.9
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 1.9e-265 918.7 484 90.5
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.2e-265 917.9 486 90.3
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 4.2e-265 917.5 484 90.5
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 9.3e-265 916.4 484 90.5
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.2e-264 916.0 486 90.1
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 1.2e-264 916.0 480 90.8
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 1.2e-264 916.0 486 89.7
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 2.1e-264 915.2 485 89.9
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 2.7e-264 914.8 485 90.7
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 2.7e-264 914.8 486 89.5
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 2.7e-264 914.8 486 89.5
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 4.6e-264 914.1 484 90.7
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.8e-263 912.1 484 90.3
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 1.8e-263 912.1 484 90.1
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 2.3e-263 911.8 485 90.5
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 2.3e-263 911.8 493 89.5
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 3.0e-263 911.4 486 89.9
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 3.9e-263 911.0 479 90.8
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 3.9e-263 911.0 477 92.2
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.9e-262 908.7 488 90.0
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 2.5e-262 908.3 487 90.1
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 4.3e-262 907.5 487 89.7
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 4.3e-262 907.5 487 89.9
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 7.4e-262 906.7 485 88.9
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 1.3e-261 906.0 482 89.8
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 1.3e-261 906.0 487 89.9
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 1.3e-261 906.0 487 89.7
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 1.6e-261 905.6 487 89.5
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 2.8e-261 904.8 483 89.4
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 2.8e-261 904.8 487 89.5
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.7e-261 904.4 487 89.5
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 3.7e-261 904.4 487 89.1
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 4.8e-261 904.0 486 89.9
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 8.2e-261 903.3 487 89.7
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 1.4e-260 902.5 487 89.3
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.8e-260 902.1 487 89.5
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 1.8e-260 902.1 489 89.4
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 1.8e-260 902.1 486 89.7
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 1.8e-260 902.1 487 89.3
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 3.1e-260 901.4 487 89.9
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 3.1e-260 901.4 486 88.7
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 6.9e-260 900.2 487 89.7
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 9.0e-260 899.8 480 89.2
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 1.3e-258 896.0 486 87.7
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 2.2e-258 895.2 453 94.9
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 2.2e-258 895.2 479 90.0
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 2.9e-258 894.8 486 87.4
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 3.8e-258 894.4 483 88.8
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 8.5e-258 893.3 484 89.3
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 1.9e-257 892.1 461 93.5
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 2.5e-257 891.7 488 88.3
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 2.5e-257 891.7 461 93.5
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 9.3e-257 889.8 485 89.1
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 2.7e-256 888.3 458 94.1
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 1.3e-255 885.9 460 91.7
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 9.4e-249 863.2 484 86.4
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 3.6e-248 861.3 457 89.9
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 1.8e-247 859.0 477 84.9
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.5e-246 855.9 430 94.2
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.6e-246 855.1 466 88.6
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 1.1e-244 849.7 441 90.9
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.9e-241 839.0 408 96.8
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 2.5e-241 838.6 439 90.2
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 2.1e-240 835.5 434 89.2
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.7e-240 835.1 455 85.5
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.0e-239 833.2 407 96.3
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.3e-237 826.2 406 95.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 4.8e-237 824.3 405 95.3
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.2e-235 819.7 407 93.9
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 5.7e-230 800.8 486 81.1
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 7.0e-228 793.9 433 85.5
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 2.5e-225 785.4 384 96.6
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 5.7e-222 774.2 421 83.6
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 7.5e-222 773.9 389 94.3
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 5.4e-220 767.7 390 94.6
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 1.6e-219 766.1 427 82.2
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 5.0e-218 761.1 455 79.6
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.0e-210 736.9 481 77.3
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.2e-192 674.5 346 92.5
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.2e-190 670.2 369 85.9
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 7.3e-185 651.0 486 69.5
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 1.1e-183 647.1 395 73.9
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.6e-182 642.5 315 96.8
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 7.3e-177 624.4 487 67.6
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.6e-177 624.0 486 67.5
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.4e-174 615.5 486 66.7
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 2.4e-167 592.8 331 86.4
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.3e-149 533.9 279 90.0
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.7e-141 506.9 351 72.9
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 5.9e-126 455.3 276 74.6
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 9.4e-116 421.4 203 97.5
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.2e-97 361.3 180 91.1
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.5e-97 360.9 191 88.5
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.5e-94 349.7 172 96.5
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.0e-93 348.2 171 96.5
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.9e-87 327.4 485 42.5
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 4.6e-78 296.2 146 95.9
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 2.3e-69 267.3 146 87.7
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 4.4e-65 253.1 164 76.8
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 9.9e-65 251.9 127 94.5
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 9.2e-63 245.4 127 86.6
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.9e-60 237.7 147 80.3
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 7.1e-55 219.2 259 44.4
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 5.1e-53 213.0 127 80.3
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 4.3e-52 209.9 100 96.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.4e-50 204.9 102 94.1
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 4.9e-40 169.9 105 75.2
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 9.6e-36 155.6 102 76.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 2.8e-35 154.1 77 96.1
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 2.8e-35 154.1 77 96.1
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 3.0e-29 134.0 69 95.7
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.7e-29 132.5 71 90.1
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 1.5e-28 131.7 197 37.6
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.7e-27 127.1 68 88.2
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.8e-27 126.7 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.8e-27 126.7 65 92.3
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-25 121.7 66 87.9
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.4e-25 120.6 66 86.4
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 6.1e-22 109.8 65 80.0
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 6.7e-21 106.3 67 73.1
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.5e-20 105.1 67 68.7
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.2e-17 95.5 48 91.7
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.4e-15 88.6 168 35.7
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 1.0e-13 82.4 71 59.2
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.0e-12 78.2 60 66.7
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 2.6e-12 77.8 72 55.6
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 5.7e-12 76.6 72 55.6
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 5.3e-10 70.1 61 68.9
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 1.2e-09 68.9 61 59.0
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 4.7e-06 57.0 40 65.0


User provided reference genes

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