Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 2.7e-211 738.4 373 100.0
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 4.3e-92 342.4 365 57.3
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 1.6e-46 191.0 394 37.6
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 7.9e-46 188.7 411 36.0
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 4.3e-44 183.0 401 36.2
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 4.3e-44 183.0 402 36.1
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 4.8e-43 179.5 406 34.0
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 3.2e-39 166.8 363 36.4
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 5.5e-39 166.0 375 36.5
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 6.1e-38 162.5 378 35.2
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 2.0e-36 157.5 409 33.3
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 2.0e-36 157.5 376 33.5
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 4.4e-36 156.4 379 32.5
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 3.4e-33 146.7 384 32.0
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 5.9e-33 146.0 379 31.7
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 6.7e-29 132.5 365 31.8
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 1.1e-28 131.7 376 31.9
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 2.0e-28 131.0 394 32.2
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 9.7e-28 128.6 383 31.3
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 3.7e-27 126.7 373 28.7
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 1.8e-26 124.4 373 33.0
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 5.9e-25 119.4 339 31.3
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 1.0e-24 118.6 366 30.3
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 1.3e-24 118.2 402 30.3
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 1.2e-22 111.7 424 28.8
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.1e-22 110.9 351 31.1
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.1e-22 110.9 351 31.1
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 8.2e-19 99.0 374 25.9
Atru.chr1.2205 Acer truncatum HOM05D009025 ORTHO05D011227 2.9e-16 90.5 227 33.0
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 1.2e-09 68.6 399 25.1
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 1.5e-07 61.6 116 39.7
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 4.2e-07 60.1 398 24.9
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 7.2e-07 59.3 162 31.5


User provided reference genes

Program Settings