Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 9.0e-208 726.9 418 100.0
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 2.5e-141 506.1 300 80.7
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 1.8e-139 500.0 279 84.2
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 1.4e-136 490.3 430 60.7
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 3.3e-125 452.6 292 73.6
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.6e-124 450.3 249 88.8
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.1e-123 447.6 290 73.1
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 1.1e-120 437.6 399 58.9
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 3.2e-120 436.0 286 71.0
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.6e-119 433.7 294 69.4
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 3.5e-119 432.6 293 67.9
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 6.7e-118 428.3 294 67.7
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 7.4e-117 424.9 290 70.0
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 3.7e-116 422.5 292 70.5
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 6.2e-116 421.8 292 69.2
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 8.1e-116 421.4 292 67.5
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.1e-115 421.0 289 67.8
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 2.4e-115 419.9 292 70.2
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 3.1e-115 419.5 305 66.6
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 5.3e-115 418.7 304 66.8
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 6.9e-115 418.3 292 67.1
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 6.9e-115 418.3 288 68.8
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 6.9e-115 418.3 288 68.8
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 1.2e-114 417.5 289 66.8
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 2.0e-114 416.8 284 70.4
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 2.6e-114 416.4 289 68.2
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 2.6e-114 416.4 275 72.0
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 2.6e-114 416.4 297 67.3
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 3.4e-114 416.0 305 66.2
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 4.5e-114 415.6 290 68.6
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.3e-113 414.1 288 68.8
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.8e-113 412.5 292 66.1
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 4.9e-113 412.1 292 67.1
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.4e-112 410.6 288 67.4
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.9e-112 410.2 295 64.1
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 3.2e-112 409.5 297 68.7
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 3.2e-112 409.5 289 67.1
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.6e-111 407.1 284 66.5
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 2.7e-111 406.4 284 67.3
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 3.5e-111 406.0 284 67.3
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 4.6e-111 405.6 293 65.2
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 4.6e-111 405.6 291 66.3
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 4.6e-111 405.6 295 66.1
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 6.0e-111 405.2 289 66.4
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.8e-110 403.7 296 64.2
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.8e-110 403.7 289 66.1
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 5.1e-110 402.1 294 66.3
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 1.3e-108 397.5 294 63.9
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 2.8e-108 396.4 291 66.7
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 3.7e-108 396.0 289 65.4
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 6.9e-107 391.7 293 63.5
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 1.5e-106 390.6 296 63.9
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 1.5e-106 390.6 297 62.6
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 2.0e-106 390.2 296 62.8
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 2.6e-106 389.8 260 71.2
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 2.6e-106 389.8 292 63.7
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 3.4e-106 389.4 288 65.3
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.0e-105 387.9 293 65.5
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 8.4e-105 384.8 298 62.1
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 3.5e-103 379.4 327 58.4
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 7.9e-103 378.3 296 61.5
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 7.9e-103 378.3 298 63.4
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 6.7e-102 375.2 296 60.8
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 9.7e-101 371.3 298 62.1
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 1.3e-100 370.9 296 60.8
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 2.2e-100 370.2 297 61.3
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.8e-100 369.8 297 62.6
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 4.8e-100 369.0 289 59.5
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 6.3e-100 368.6 291 60.5
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.4e-99 367.5 299 62.9
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 5.3e-99 365.5 236 72.5
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 2.6e-98 363.2 299 60.9
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 1.0e-97 361.3 291 59.5
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 1.3e-97 360.9 289 58.8
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 3.8e-97 359.4 297 57.9
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 2.5e-96 356.7 315 60.6
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 5.5e-96 355.5 290 58.3
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 9.3e-96 354.8 299 59.9
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 2.7e-95 353.2 285 62.1
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 2.3e-94 350.1 290 59.3
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 2.4e-91 340.1 289 57.4
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 2.6e-90 336.7 289 57.4
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 5.9e-90 335.5 290 56.6
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 5.9e-90 335.5 290 56.6
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 3.0e-86 323.2 213 70.9
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 3.3e-85 319.7 295 54.9
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 1.7e-84 317.4 275 57.1
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 5.9e-82 308.9 290 50.3
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 1.8e-78 297.4 208 66.3
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 8.2e-76 288.5 298 49.3
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 1.3e-73 281.2 287 50.2
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.3e-60 238.0 158 73.4
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 3.5e-58 229.9 159 69.2
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 9.5e-56 221.9 315 40.0
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 3.0e-54 216.9 306 38.9
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 3.4e-53 213.4 308 39.0
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.8e-52 210.3 168 65.5
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 6.8e-46 189.1 295 36.6
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 5.4e-43 179.5 225 43.6
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.6e-37 160.6 127 66.9
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 2.9e-36 157.1 289 32.5
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 4.6e-34 149.8 146 54.8
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 1.8e-30 137.9 100 65.0
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 8.9e-30 135.6 89 77.5
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 4.4e-29 133.3 82 73.2
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.2e-27 127.1 132 54.5
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 1.4e-19 101.7 202 31.2
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 1.6e-15 88.2 275 26.2


User provided reference genes

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