Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007995 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 9.0e-93 343.6 174 100.0
CSS0011897 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 2.0e-84 315.8 174 93.1
CSS0009698 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 3.4e-84 315.1 174 93.1
CSS0019604 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.9e-82 309.3 189 86.8
CSS0023575 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.8e-61 239.6 189 71.4
Actinidia32353 Actinidia chinensis HOM05D001299 ORTHO05D009516 1.3e-59 233.4 177 71.2
GSVIVG01037941001 Vitis vinifera HOM05D001299 ORTHO05D009516 2.1e-57 226.1 177 67.2
TAR626G1915 Trochodendron aralioides HOM05D001299 ORTHO05D009516 3.6e-57 225.3 174 69.5
FvH4_3g11560 Fragaria vesca HOM05D001299 ORTHO05D009516 3.0e-56 222.2 176 66.5
FAN16G0158 Fragaria x ananassa HOM05D001299 ORTHO05D009516 3.0e-56 222.2 176 66.5
Lalb_Chr15g0089001 Lupinus albus HOM05D001299 ORTHO05D009516 8.8e-56 220.7 177 65.0
RcHm_v2.0_Chr5g0018511 Rosa chinensis HOM05D001299 ORTHO05D009516 1.5e-55 219.9 176 66.5
Haze_05959 Corylus avellana HOM05D001299 ORTHO05D009516 2.0e-55 219.5 183 63.9
Lj6g0006807 Lotus japonicus HOM05D001299 ORTHO05D009516 2.0e-55 219.5 177 65.0
FAN21G1530 Fragaria x ananassa HOM05D001299 ORTHO05D009516 3.3e-55 218.8 176 65.9
FAN25G0007 Fragaria x ananassa HOM05D001299 ORTHO05D009516 3.3e-55 218.8 176 65.3
Cfa000759 Carpinus fangiana HOM05D001299 ORTHO05D009516 7.4e-55 217.6 181 65.2
Sed0008848 Sechium edule HOM05D001299 ORTHO05D009516 1.3e-54 216.9 177 64.4
ClCG01G008880 Citrullus lanatus HOM05D001299 ORTHO05D009516 2.8e-54 215.7 183 62.8
Phvul.006G122300 Phaseolus vulgaris HOM05D001299 ORTHO05D009516 2.8e-54 215.7 177 63.8
Potri.011G155500 Populus trichocarpa HOM05D001299 ORTHO05D009516 6.3e-54 214.5 183 63.9
Manes.03G067266 Manihot esculenta HOM05D001299 ORTHO05D009516 1.1e-53 213.8 176 63.6
Sabra11G0144300 Salix brachista HOM05D001299 ORTHO05D009516 1.1e-53 213.8 177 65.0
Ca_00935_v3 Cicer arietinum L. HOM05D001299 ORTHO05D009516 2.4e-53 212.6 177 63.8
MD10G1240700 Malus domestica HOM05D001299 ORTHO05D009516 2.4e-53 212.6 176 62.5
COL.COLO4_26895 Corchorus olitorius HOM05D001299 ORTHO05D009516 3.1e-53 212.2 176 63.1
Glyma.15G136200 Glycine max HOM05D001299 ORTHO05D009516 3.1e-53 212.2 177 62.1
Lj1A1156T42 Lonicera japonica HOM05D001299 ORTHO05D009516 3.1e-53 212.2 183 63.4
Thecc.06G007400 Theobroma cacao HOM05D001299 ORTHO05D009516 3.1e-53 212.2 183 62.3
VMungo0540G0517 Vigna mungo HOM05D001299 ORTHO05D009516 9.1e-53 210.7 177 62.1
Prupe.4G102900 Prunus persica HOM05D001299 ORTHO05D009516 1.5e-52 209.9 176 63.1
Ciclev10015984m.g Citrus clementina HOM05D001299 ORTHO05D009516 2.0e-52 209.5 176 62.5
MSTRG.16317 Avicennia marina HOM05D001299 ORTHO05D009516 3.4e-52 208.8 177 61.0
Nn7g37865 Nelumbo nucifera HOM05D001299 ORTHO05D009516 4.5e-52 208.4 177 63.3
Eucgr.D01028 Eucalyptus grandis HOM05D001299 ORTHO05D009516 1.3e-51 206.8 183 60.7
Medtr2g032540 Medicago truncatula HOM05D001299 ORTHO05D009516 1.7e-51 206.5 176 62.5
Gorai.010G142100 Gossypium raimondii HOM05D001299 ORTHO05D009516 2.2e-51 206.1 176 62.5
Cc09_g07140 Coffea canephora HOM05D001299 ORTHO05D009516 2.9e-51 205.7 176 60.2
Gohir.D06G121900 Gossypium hirsutum HOM05D001299 ORTHO05D009516 2.9e-51 205.7 176 62.5
Psat1g163720 Pisum sativum HOM05D001299 ORTHO05D009516 2.9e-51 205.7 177 62.1
TPR.G15970 Trifolium pratense HOM05D001299 ORTHO05D009516 2.9e-51 205.7 177 62.7
CANSAT35G1957 Cannabis sativa HOM05D001299 ORTHO05D009516 5.0e-51 204.9 183 61.7
Atru.chr10.662 Acer truncatum HOM05D001299 ORTHO05D009516 1.1e-50 203.8 184 60.9
arahy.Tifrunner.gnm1.ann1.85QD0P Arachis hypogaea HOM05D001299 ORTHO05D009516 1.1e-50 203.8 189 58.2
Duzib235G0189 Durio zibethinus HOM05D001299 ORTHO05D009516 1.4e-50 203.4 173 61.3
MELO3C021811.2 Cucumis melo HOM05D001299 ORTHO05D009516 4.2e-50 201.8 208 55.8
CiPaw.10G111000 Carya illinoinensis HOM05D001299 ORTHO05D009516 1.2e-49 200.3 184 60.9
SalBow8G0840 Salvia bowleyana HOM05D001299 ORTHO05D009516 1.2e-49 200.3 177 58.2
SalBow8G5388 Salvia bowleyana HOM05D001299 ORTHO05D009516 1.2e-49 200.3 177 58.2
CAN.G675.34 Capsicum annuum HOM05D001299 ORTHO05D009516 2.7e-49 199.1 173 59.0
MBI18_g26477_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 2.7e-49 199.1 175 60.0
Solyc02g069620.4 Solanum lycopersicum HOM05D001299 ORTHO05D009516 6.1e-49 198.0 173 58.4
Sopen02g018750 Solanum pennellii HOM05D001299 ORTHO05D009516 8.0e-49 197.6 173 57.8
arahy.Tifrunner.gnm1.ann1.ZN1LAP Arachis hypogaea HOM05D001299 ORTHO05D009516 1.0e-48 197.2 174 59.8
Nitab4.5_0010415g0020 Nicotiana tabacum HOM05D001299 ORTHO05D009516 1.8e-48 196.4 195 53.8
Nitab4.5_0007613g0040 Nicotiana tabacum HOM05D001299 ORTHO05D009516 2.3e-48 196.1 195 53.3
TWI38G0147 Tripterygium wilfordii HOM05D001299 ORTHO05D009516 3.9e-48 195.3 176 58.5
CsaV3_1G037750 Cucumis sativus L. HOM05D001299 ORTHO05D009516 1.1e-47 193.7 160 63.8
PGSC0003DMG400021135 Solanum tuberosum HOM05D001299 ORTHO05D009516 2.0e-47 193.0 196 52.0
Cpa.g.sc285.1 Carica papaya HOM05D001299 ORTHO05D009516 5.7e-47 191.4 153 65.4
Lsat_1_v5_gn_1_130040 Lactuca sativa HOM05D001299 ORTHO05D009516 1.3e-46 190.3 178 57.9
Migut.M01940 Erythranthe guttata HOM05D001299 ORTHO05D009516 2.2e-46 189.5 178 55.1
HanXRQChr11g0341271 Helianthus annuus HOM05D001299 ORTHO05D009516 3.7e-46 188.7 172 58.1
ATR1098G024 Amborella trichopoda HOM05D001299 ORTHO05D009516 4.8e-46 188.3 177 56.5
THA.LOC104806244 Tarenaya hassleriana HOM05D001299 ORTHO05D009516 2.4e-45 186.0 176 55.1
SGA_v2.0_scaffold298G47639 Striga asiatica HOM05D001299 ORTHO05D009516 2.0e-44 183.0 225 47.6
MBI18_g14310_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 1.7e-43 179.9 148 61.5
Os03g0781400 Oryza sativa ssp. japonica HOM05D001299 ORTHO05D009516 3.2e-42 175.6 175 53.1
CSS0007807 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 7.2e-42 174.5 160 61.2
CSS0046492 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 7.2e-42 174.5 160 61.2
BcaC06g31610 Brassica carinata HOM05D001299 ORTHO05D009516 1.2e-41 173.7 177 50.8
A06p47140 Brassica napus HOM05D001299 ORTHO05D009516 3.6e-41 172.2 177 50.3
AL8G15300 Arabidopsis lyrata HOM05D001299 ORTHO05D009516 1.4e-40 170.2 177 50.3
Sp2g09310 Schrenkiella parvula HOM05D001299 ORTHO05D009516 1.4e-40 170.2 177 50.3
BcaC06g34545 Brassica carinata HOM05D001299 ORTHO05D009516 1.8e-40 169.9 178 50.0
Thhalv10000979m.g Eutrema salsugineum HOM05D001299 ORTHO05D009516 1.8e-40 169.9 177 50.8
Aa31LG9G8690 Aethionema arabicum HOM05D001299 ORTHO05D009516 2.0e-39 166.4 177 52.0
AT5G44520 Arabidopsis thaliana HOM05D001299 ORTHO05D009516 5.7e-39 164.9 177 49.2
BraA06t27586Z Brassica rapa HOM05D001299 ORTHO05D009516 5.7e-39 164.9 185 48.6
BolC7t43265H Brassica oleracea HOM05D001299 ORTHO05D009516 9.7e-39 164.1 185 48.6
CSS0034631 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.3e-38 163.7 168 58.9
C07p27350 Brassica napus HOM05D001299 ORTHO05D009516 2.2e-38 162.9 185 48.1
Carub.0008s0398 Capsella rubella HOM05D001299 ORTHO05D009516 4.8e-38 161.8 177 49.7
Peaxi162Scf00195g00521 Petunia axillaris HOM05D001299 ORTHO05D009516 1.8e-37 159.8 200 45.5
Pp3c16_13350 Physcomitrium patens HOM05D001299 ORTHO05D009516 7.0e-37 157.9 178 44.9
Gohir.A06G118100 Gossypium hirsutum HOM05D001299 ORTHO05D009516 6.1e-25 118.2 110 60.0
Glyma.09G030500 Glycine max HOM05D001299 ORTHO05D009516 2.3e-24 116.3 84 66.7
CDE03G0248 Ceratophyllum demersum HOM05D001299 ORTHO05D009516 1.7e-22 110.2 110 54.5
QL05p065109 Quercus lobata HOM05D001299 ORTHO05D009516 6.3e-22 108.2 77 72.7
Oeu063345.2 Olea europaea HOM05D001299 ORTHO05D009516 7.5e-15 84.7 58 70.7
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 6.4e-14 81.6 45 77.8
MCO05G574 Micromonas commoda HOM05D001299 ORTHO05D009516 4.6e-12 75.5 203 25.1
PRCOL_00006791 Prasinoderma coloniale HOM05D001299 ORTHO05D009516 6.0e-12 75.1 196 28.1
CARHR178590 Cardamine hirsuta HOM05D001299 ORTHO05D009516 2.1e-09 66.6 55 58.2
Pp3c5_830 Physcomitrium patens HOM05D001299 ORTHO05D009516 2.1e-09 66.6 66 53.0
Cre07.g314600 Chlamydomonas reinhardtii HOM05D001299 ORTHO05D009516 8.0e-09 64.7 83 41.0
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 4.0e-08 62.4 49 59.2


User provided reference genes

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