Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.6e-156 555.4 300 100.0
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 2.6e-108 396.0 324 70.1
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.6e-89 333.6 295 63.7
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.4e-88 330.5 294 63.9
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 8.2e-86 321.2 241 74.7
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 4.0e-80 302.4 256 66.4
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.3e-79 299.3 277 60.3
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 7.5e-79 298.1 277 60.3
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.1e-77 294.3 265 60.4
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.4e-77 293.9 277 59.2
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 4.2e-74 282.3 293 53.9
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.6e-73 280.4 279 58.8
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 6.1e-73 278.5 362 52.2
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.0e-72 277.7 249 63.5
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.4e-72 277.3 288 57.3
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.8e-72 276.9 242 63.2
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 3.0e-72 276.2 290 57.6
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 2.6e-71 273.1 295 56.3
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.7e-70 270.4 214 71.0
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 1.7e-70 270.4 261 59.4
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 2.4e-69 266.5 245 60.0
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 5.4e-69 265.4 283 54.8
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 9.1e-69 264.6 276 56.2
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 1.2e-68 264.2 266 55.6
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 2.0e-68 263.5 281 54.8
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 7.7e-68 261.5 291 54.3
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 7.7e-68 261.5 278 55.8
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.0e-67 261.2 283 53.7
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 2.2e-67 260.0 277 56.3
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 2.9e-67 259.6 270 54.4
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.9e-67 259.6 322 48.4
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 5.0e-67 258.8 257 59.5
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 6.5e-67 258.5 286 53.1
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 8.5e-67 258.1 286 51.0
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 1.9e-66 256.9 281 54.4
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 1.9e-66 256.9 280 56.4
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 2.5e-66 256.5 269 56.9
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 3.2e-66 256.1 274 55.8
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 1.6e-65 253.8 274 55.5
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.7e-65 253.1 263 55.9
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 2.7e-65 253.1 288 51.4
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.7e-65 252.3 263 56.3
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 6.1e-65 251.9 284 52.1
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 8.0e-65 251.5 261 56.7
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 1.0e-64 251.1 289 51.9
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 1.0e-64 251.1 244 59.8
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.8e-64 250.4 290 52.8
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 4.0e-64 249.2 274 54.7
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.5e-63 247.3 262 54.6
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 7.5e-63 245.0 289 51.9
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 7.5e-63 245.0 263 54.8
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 1.3e-62 244.2 267 51.7
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 2.2e-62 243.4 256 54.3
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 6.3e-62 241.9 268 53.7
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 1.1e-61 241.1 261 54.0
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 9.2e-61 238.0 253 54.9
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.7e-60 236.5 288 48.6
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 2.7e-60 236.5 273 52.7
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 7.7e-60 235.0 272 52.6
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 7.7e-60 235.0 222 59.0
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 7.7e-60 235.0 250 54.8
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 7.7e-60 235.0 254 52.4
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 1.7e-59 233.8 259 52.5
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.3e-59 233.4 254 52.4
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 4.3e-58 229.2 255 54.5
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 2.1e-57 226.9 257 53.7
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 4.0e-56 222.6 232 56.9
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.4e-55 219.2 256 50.8
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 5.7e-55 218.8 246 52.0
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 7.5e-55 218.4 194 63.9
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 6.4e-54 215.3 271 45.4
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.3e-50 203.0 228 53.1
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 3.6e-49 199.5 304 40.5
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 5.2e-48 195.7 204 53.4
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 8.3e-46 188.3 202 56.9
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 7.0e-45 185.3 289 38.4
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 4.6e-44 182.6 293 37.2
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.7e-43 180.6 231 48.1
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.9e-43 179.5 224 48.7
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.5e-42 177.6 248 46.0
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 1.9e-42 177.2 230 45.2
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 6.4e-38 162.2 289 39.1
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 3.2e-37 159.8 159 55.3
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.2e-36 157.9 232 47.0
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 8.1e-33 145.2 214 44.9
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 1.4e-32 144.4 269 36.8
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 1.7e-30 137.5 107 70.1
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.4e-29 134.4 255 39.2
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 4.3e-26 122.9 96 69.8
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.1e-24 118.2 271 31.4
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 3.0e-19 100.1 128 45.3
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 3.3e-18 96.7 136 39.0
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 4.5e-15 86.3 87 57.5
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 4.5e-15 86.3 143 42.7
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 7.9e-12 75.5 72 51.4
CSS0039372 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 6.9e-08 62.4 41 80.5
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 7.6e-07 58.9 61 52.5
Rhsim02G0188900 Rhododendron simsii HOM05D007522 ORTHO05D009518 6.4e-06 55.8 42 71.4


User provided reference genes

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