Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 6.6e-32 140.2 76 100.0
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.1e-29 132.9 76 92.1
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.8e-29 132.1 76 92.1
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 1.0e-24 116.3 77 79.2
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.0e-24 114.8 77 79.2
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 3.9e-24 114.4 77 80.5
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 6.6e-24 113.6 77 80.5
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.5e-23 112.5 78 80.8
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 1.5e-23 112.5 78 80.8
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.5e-23 112.5 75 76.0
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 3.3e-23 111.3 77 77.9
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 4.3e-23 110.9 77 76.6
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 4.3e-23 110.9 77 79.2
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 4.3e-23 110.9 76 78.9
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 7.3e-23 110.2 77 79.2
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 6.2e-22 107.1 77 75.3
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 1.4e-21 105.9 72 81.9
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 3.1e-21 104.8 78 73.1
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 4.0e-21 104.4 75 76.0
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 6.8e-21 103.6 72 79.2
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 6.8e-21 103.6 72 79.2
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 8.9e-21 103.2 77 74.0
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 3.4e-20 101.3 75 73.3
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 4.4e-20 100.9 78 69.2
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 5.8e-20 100.5 75 73.3
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 5.8e-20 100.5 73 75.3
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 7.5e-20 100.1 75 74.7
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 7.5e-20 100.1 75 76.0
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 9.9e-20 99.8 75 73.3
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 9.9e-20 99.8 78 69.2
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 1.3e-19 99.4 74 74.3
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 2.2e-19 98.6 75 72.0
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.9e-19 98.2 76 72.4
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 4.9e-19 97.4 92 65.2
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 8.3e-19 96.7 91 62.6
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 1.4e-18 95.9 76 76.3
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 1.4e-18 95.9 77 68.8
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 1.4e-18 95.9 74 73.0
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 4.1e-18 94.4 75 72.0
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 4.1e-18 94.4 76 69.7
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 4.1e-18 94.4 75 70.7
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 7.1e-18 93.6 74 71.6
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 3.5e-17 91.3 75 68.0
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 3.5e-17 91.3 70 72.9
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 7.8e-17 90.1 75 65.3
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 7.8e-17 90.1 72 70.8
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 1.0e-16 89.7 76 68.4
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 1.7e-16 89.0 75 66.7
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 1.7e-16 89.0 75 66.7
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 1.7e-16 89.0 75 65.3
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 1.7e-16 89.0 75 65.3
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 2.3e-16 88.6 75 65.3
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 2.3e-16 88.6 73 67.1
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 3.0e-16 88.2 70 74.3
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 3.0e-16 88.2 70 72.9
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 1.5e-15 85.9 77 62.3
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 2.5e-15 85.1 87 62.1
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 4.3e-15 84.3 71 69.0
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 5.6e-15 84.0 74 68.9
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 9.5e-15 83.2 74 68.9
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 1.2e-14 82.8 72 65.3
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 1.2e-14 82.8 72 65.3
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 1.2e-14 82.8 75 61.3
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 1.2e-14 82.8 75 62.7
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 2.8e-14 81.6 72 65.3
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 2.8e-14 81.6 72 65.3
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 3.6e-14 81.3 79 60.8
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 4.7e-14 80.9 88 56.8
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 2.0e-12 75.5 80 60.0
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 2.0e-12 75.5 74 58.1
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 2.0e-12 75.5 72 63.9
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 2.6e-12 75.1 102 50.0
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 9.9e-12 73.2 72 62.5
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 8.4e-11 70.1 77 54.5
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 1.1e-10 69.7 52 69.2
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 7.1e-10 67.0 91 50.5
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 2.1e-09 65.5 72 50.0
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 3.5e-09 64.7 52 67.3
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 4.6e-09 64.3 72 55.6
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 2.1e-06 55.5 70 51.4
Peaxi162Scf00003g01523 Petunia axillaris HOM05D007769 ORTHO05D009588 3.6e-06 54.7 36 77.8
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 4.7e-06 54.3 78 50.0
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 6.2e-06 53.9 70 52.9


User provided reference genes

Program Settings