Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 3.7e-182 641.3 309 100.0
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.6e-180 635.2 309 99.0
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 3.2e-133 478.8 291 77.7
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 7.1e-133 477.6 287 76.7
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 1.5e-130 469.9 287 77.4
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 5.6e-130 468.0 291 75.9
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 7.3e-130 467.6 284 77.8
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.6e-130 467.2 284 77.8
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 9.6e-130 467.2 287 77.4
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 1.2e-129 466.8 289 76.1
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 2.8e-129 465.7 294 75.2
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 3.1e-128 462.2 308 74.7
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 6.8e-128 461.1 294 74.1
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.2e-127 460.3 284 76.8
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 2.9e-126 455.7 289 74.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 2.9e-126 455.7 287 73.2
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 4.9e-126 454.9 289 73.0
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 6.4e-126 454.5 306 72.5
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 8.4e-126 454.1 299 72.6
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 1.9e-125 453.0 289 72.0
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 4.2e-125 451.8 291 73.5
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 9.3e-125 450.7 287 72.5
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 1.2e-124 450.3 293 71.0
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.6e-124 449.9 288 72.9
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 2.7e-124 449.1 287 73.2
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 2.7e-124 449.1 288 74.3
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.0e-124 448.0 288 72.6
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 6.0e-124 448.0 307 69.4
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 7.8e-124 447.6 287 72.1
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.0e-123 447.2 309 69.9
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.3e-123 446.8 288 72.6
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.7e-123 446.4 305 71.8
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 2.3e-123 446.0 287 72.8
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 2.3e-123 446.0 296 70.9
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 5.1e-123 444.9 286 73.8
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 8.7e-123 444.1 289 72.7
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 7.3e-122 441.0 306 68.3
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 4.8e-121 438.3 302 70.2
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 6.2e-121 438.0 282 72.0
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 8.1e-121 437.6 287 71.8
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 1.4e-120 436.8 283 72.1
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.8e-120 436.4 289 71.3
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 2.4e-120 436.0 309 67.0
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 4.0e-120 435.3 307 68.4
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 9.0e-120 434.1 306 69.3
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.2e-119 433.7 310 68.1
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.0e-119 433.0 287 70.0
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 3.4e-119 432.2 286 73.1
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 9.9e-119 430.6 287 69.7
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 1.3e-118 430.3 293 69.6
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.7e-118 429.9 306 68.3
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 2.2e-118 429.5 291 70.4
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 6.4e-118 427.9 307 67.8
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.4e-117 426.8 290 70.3
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 1.9e-117 426.4 283 68.9
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 7.1e-117 424.5 301 71.4
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 9.3e-117 424.1 289 70.2
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.2e-116 423.7 304 65.5
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 4.6e-116 421.8 308 65.6
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 4.6e-116 421.8 287 68.6
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 7.9e-116 421.0 310 66.8
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.3e-115 420.2 294 68.4
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 1.3e-115 420.2 307 68.7
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 1.9e-114 416.4 309 65.7
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.4e-112 410.2 288 65.6
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.4e-112 410.2 288 66.0
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 3.1e-112 409.1 287 70.7
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 4.0e-112 408.7 301 63.5
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 2.0e-111 406.4 298 62.4
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 7.6e-111 404.4 286 67.8
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.3e-110 403.7 346 60.1
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.3e-110 403.7 289 66.8
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 4.2e-109 398.7 308 64.3
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.3e-107 392.9 284 68.3
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 3.0e-107 392.5 261 70.9
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 8.7e-107 391.0 235 77.9
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.1e-106 390.6 286 63.6
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 2.5e-106 389.4 281 63.7
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 3.3e-106 389.0 286 63.6
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 4.3e-106 388.7 286 63.6
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 4.3e-106 388.7 286 63.6
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 5.6e-106 388.3 286 62.6
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 5.6e-106 388.3 287 64.1
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.6e-105 386.7 281 63.3
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 3.4e-103 379.0 379 51.2
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 2.2e-102 376.3 285 60.7
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 4.9e-102 375.2 283 62.9
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 7.9e-100 367.9 303 60.7
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 5.7e-98 361.7 288 60.4
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 9.0e-96 354.4 289 59.2
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.1e-92 343.2 285 59.3
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 1.3e-91 340.5 228 72.4
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 8.7e-91 337.8 278 61.2
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.5e-90 337.0 283 59.7
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.7e-86 323.6 462 44.8
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 3.8e-86 322.4 207 70.0
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 5.0e-86 322.0 299 51.8
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 9.4e-85 317.8 285 54.4
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 1.6e-84 317.0 278 54.7
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 2.7e-84 316.2 284 55.6
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 2.0e-82 310.1 258 61.2
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 4.8e-73 278.9 290 50.3
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.2e-71 274.2 289 50.2
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 2.0e-71 273.5 183 69.9
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 4.1e-64 249.2 341 39.9
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.0e-62 244.6 191 61.3
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 8.0e-60 235.0 201 60.2
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 5.0e-54 215.7 157 61.8
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.8e-51 207.2 173 56.1
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 9.2e-40 168.3 143 60.1
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 5.0e-38 162.5 107 66.4
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 8.0e-36 155.2 208 43.8
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 2.0e-34 150.6 126 56.3
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 7.5e-26 122.1 291 27.1
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 6.6e-22 109.0 66 75.8
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 2.5e-21 107.1 258 26.7
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 2.1e-20 104.0 71 73.2
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 6.4e-17 92.4 67 61.2
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.6e-13 79.3 51 74.5
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 5.4e-08 62.8 54 55.6


User provided reference genes

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